BLASTX nr result

ID: Coptis23_contig00011594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011594
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598674.1| Protein kinase-like protein [Medicago trunca...    75   2e-11
ref|XP_002879277.1| predicted protein [Arabidopsis lyrata subsp....    68   4e-11
gb|ACU22698.1| unknown [Glycine max]                                   74   5e-11
gb|ACM89531.1| serine/threonine protein kinase [Glycine max]           74   5e-11
ref|NP_001239619.1| PTI1-like tyrosine-protein kinase 3-like [Gl...    74   5e-11

>ref|XP_003598674.1| Protein kinase-like protein [Medicago truncatula]
           gi|355487722|gb|AES68925.1| Protein kinase-like protein
           [Medicago truncatula]
          Length = 500

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 36/60 (60%), Positives = 47/60 (78%)
 Frame = -1

Query: 251 SKLTPASNEVPTVLTLDELKEKTNNFGSKSLIGEGHYASVYSGKLDSGKAVAIKKLDPSS 72
           +++ P+  EVPT+L+LDELKEKT+NFG  + IGEG Y SVY   L+ GKAVA+KKLD S+
Sbjct: 203 TQIEPSPIEVPTLLSLDELKEKTDNFGPNTWIGEGRYGSVYYATLNDGKAVALKKLDVST 262


>ref|XP_002879277.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325116|gb|EFH55536.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 355

 Score = 68.2 bits (165), Expect(2) = 4e-11
 Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
 Frame = -1

Query: 266 SSQKGSKLTPASN---EVPTVLTLDELKEKTNNFGSKSLIGEGHYASVYSGKLDSGKAVA 96
           ++QK     P      EVP+ L++DE+KEKT+NFGSKSLIGEG Y  VY   L+ GKAVA
Sbjct: 32  ANQKNQNAKPEETLPIEVPS-LSVDEVKEKTDNFGSKSLIGEGSYGRVYYATLNDGKAVA 90

Query: 95  IKKLD 81
           +KKLD
Sbjct: 91  LKKLD 95



 Score = 26.2 bits (56), Expect(2) = 4e-11
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 9/42 (21%)
 Frame = -3

Query: 102 CGDKKARSFIHFRLLVFG---------QGVRGTQLGPVLDWM 4
           C D+K R  + + L   G         +GV+G Q GP LDW+
Sbjct: 128 CVDEKLR-VLAYELATMGSLHDILHGRKGVQGAQPGPTLDWI 168


>gb|ACU22698.1| unknown [Glycine max]
          Length = 366

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 9/73 (12%)
 Frame = -1

Query: 263 SQKGSKLT----PASNEVPT-----VLTLDELKEKTNNFGSKSLIGEGHYASVYSGKLDS 111
           +QKGSK++    P + + P       L+LDELKEKT+NFGSK+LIGEG Y  VY   L++
Sbjct: 33  NQKGSKVSAPVKPETQKAPPPIEAPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNN 92

Query: 110 GKAVAIKKLDPSS 72
           GKAVA+KKLD SS
Sbjct: 93  GKAVAVKKLDVSS 105


>gb|ACM89531.1| serine/threonine protein kinase [Glycine max]
          Length = 366

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 9/73 (12%)
 Frame = -1

Query: 263 SQKGSKLT----PASNEVPT-----VLTLDELKEKTNNFGSKSLIGEGHYASVYSGKLDS 111
           +QKGSK++    P + + P       L+LDELKEKT+NFGSK+LIGEG Y  VY   L++
Sbjct: 33  NQKGSKVSAPVKPETQKAPPPIEAPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNN 92

Query: 110 GKAVAIKKLDPSS 72
           GKAVA+KKLD SS
Sbjct: 93  GKAVAVKKLDVSS 105


>ref|NP_001239619.1| PTI1-like tyrosine-protein kinase 3-like [Glycine max]
           gi|223452369|gb|ACM89512.1| protein kinase Pti1 [Glycine
           max] gi|255638318|gb|ACU19471.1| unknown [Glycine max]
          Length = 363

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 9/73 (12%)
 Frame = -1

Query: 263 SQKGSKLT----PASNEVPT-----VLTLDELKEKTNNFGSKSLIGEGHYASVYSGKLDS 111
           +QKGSK++    P + + P       L+LDELKEKT+NFGSK+LIGEG Y  VY   L++
Sbjct: 33  NQKGSKVSAPVKPETQKAPPPIEAPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNN 92

Query: 110 GKAVAIKKLDPSS 72
           GKAVA+KKLD SS
Sbjct: 93  GKAVAVKKLDVSS 105


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