BLASTX nr result

ID: Coptis23_contig00011573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011573
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262701.1| PREDICTED: elongator complex protein 3 [Viti...    71   1e-10
ref|XP_004138068.1| PREDICTED: elongator complex protein 3-like ...    70   1e-10
ref|XP_002448077.1| hypothetical protein SORBIDRAFT_06g020610 [S...    70   2e-10
ref|NP_001136699.1| hypothetical protein [Zea mays] gi|194696686...    70   2e-10
ref|NP_001053128.1| Os04g0484900 [Oryza sativa Japonica Group] g...    70   2e-10

>ref|XP_002262701.1| PREDICTED: elongator complex protein 3 [Vitis vinifera]
          Length = 563

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +3

Query: 84  AIAEIVNGMVERSRRGEDVDLNALKTAACRKYGLARAPKLV 206
           AIAEIVN MVE S RGE+VDLNALK+AACRKYGL+RAPKLV
Sbjct: 34  AIAEIVNNMVELSHRGENVDLNALKSAACRKYGLSRAPKLV 74


>ref|XP_004138068.1| PREDICTED: elongator complex protein 3-like [Cucumis sativus]
           gi|449501374|ref|XP_004161350.1| PREDICTED: elongator
           complex protein 3-like [Cucumis sativus]
          Length = 564

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +3

Query: 84  AIAEIVNGMVERSRRGEDVDLNALKTAACRKYGLARAPKLV 206
           AIAEIVN MV+ SR+G++VDLNALK+AACRKYGLARAPKLV
Sbjct: 35  AIAEIVNSMVDLSRKGQNVDLNALKSAACRKYGLARAPKLV 75


>ref|XP_002448077.1| hypothetical protein SORBIDRAFT_06g020610 [Sorghum bicolor]
           gi|241939260|gb|EES12405.1| hypothetical protein
           SORBIDRAFT_06g020610 [Sorghum bicolor]
          Length = 571

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +3

Query: 84  AIAEIVNGMVERSRRGEDVDLNALKTAACRKYGLARAPKLV 206
           AIAEIV+ M E SRRGEDVDLNALK+AACR+YGLARAPKLV
Sbjct: 42  AIAEIVSAMGELSRRGEDVDLNALKSAACRRYGLARAPKLV 82


>ref|NP_001136699.1| hypothetical protein [Zea mays] gi|194696686|gb|ACF82427.1| unknown
           [Zea mays] gi|414586702|tpg|DAA37273.1| TPA:
           hypothetical protein ZEAMMB73_296405 [Zea mays]
          Length = 570

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +3

Query: 84  AIAEIVNGMVERSRRGEDVDLNALKTAACRKYGLARAPKLV 206
           AIAEIV+ M E SRRGEDVDLNALK+AACR+YGLARAPKLV
Sbjct: 41  AIAEIVSAMGELSRRGEDVDLNALKSAACRRYGLARAPKLV 81


>ref|NP_001053128.1| Os04g0484900 [Oryza sativa Japonica Group]
           gi|75232157|sp|Q7X7L3.2|ELP3_ORYSJ RecName:
           Full=Elongator complex protein 3; AltName:
           Full=Elongator component 3 gi|38345341|emb|CAE03152.2|
           OSJNBa0081L15.14 [Oryza sativa Japonica Group]
           gi|38346050|emb|CAE02005.2| OJ000223_09.4 [Oryza sativa
           Japonica Group] gi|90265118|emb|CAC09485.2| H0811E11.1
           [Oryza sativa Indica Group] gi|113564699|dbj|BAF15042.1|
           Os04g0484900 [Oryza sativa Japonica Group]
           gi|116310479|emb|CAH67482.1| H0805A05.12 [Oryza sativa
           Indica Group] gi|125548774|gb|EAY94596.1| hypothetical
           protein OsI_16373 [Oryza sativa Indica Group]
           gi|215768603|dbj|BAH00832.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 573

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +3

Query: 84  AIAEIVNGMVERSRRGEDVDLNALKTAACRKYGLARAPKLV 206
           AIAEIV+ M E SRRGEDVDLNALK+AACR+YGLARAPKLV
Sbjct: 44  AIAEIVSAMGELSRRGEDVDLNALKSAACRRYGLARAPKLV 84


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