BLASTX nr result

ID: Coptis23_contig00011569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011569
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307061.1| predicted protein [Populus trichocarpa] gi|2...   247   3e-63
ref|XP_003532080.1| PREDICTED: uncharacterized protein LOC100805...   242   9e-62
ref|XP_002273487.1| PREDICTED: uncharacterized protein LOC100243...   242   9e-62
ref|XP_002310542.1| predicted protein [Populus trichocarpa] gi|2...   237   3e-60
ref|XP_003630350.1| Zinc finger protein [Medicago truncatula] gi...   227   2e-57

>ref|XP_002307061.1| predicted protein [Populus trichocarpa] gi|222856510|gb|EEE94057.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  247 bits (630), Expect = 3e-63
 Identities = 125/203 (61%), Positives = 141/203 (69%)
 Frame = -1

Query: 868 CEICGSVAVNIRPSDFEKVVASLKDYETLMQKTVSGEPTSTHVRRNSAVDPDAVAGIRRQ 689
           CEICG VA+NIR SDF+KV+ +LKDYE L ++T +G+P    V  ++ VDPDAVA +RRQ
Sbjct: 166 CEICGHVAINIRTSDFKKVMVALKDYEALRERTATGDPNPAQVHASAGVDPDAVAAVRRQ 225

Query: 688 RLSEIALWFNIHMXXXXXXXXXXXTVSQGVIELSANNTMEGALTNENRATKWAVEXXXXX 509
           RLSEI+LWF  H             VSQ V E   N   E  +  +NRATKWAVE     
Sbjct: 226 RLSEISLWFCPHNNNTNNYNNNSAAVSQVVSEQPLNTVTEDIVPADNRATKWAVEGTGIL 285

Query: 508 XXXXXXXXXXAWLIAPHVGKRTAKMGLRILLGGVCALTVVIFLRFIVLTRIKYGPARYWA 329
                     AWLIAP VGK+TAK GL ILLGG+CALTVVIF RFIVLTRIKYGPARYWA
Sbjct: 286 LATGLLTVTLAWLIAPRVGKKTAKSGLHILLGGICALTVVIFFRFIVLTRIKYGPARYWA 345

Query: 328 ILFVFWFLVFGIWASRTHGAHKT 260
           ILFVFWFLVFGIWASRTH AH T
Sbjct: 346 ILFVFWFLVFGIWASRTHDAHTT 368


>ref|XP_003532080.1| PREDICTED: uncharacterized protein LOC100805323 [Glycine max]
          Length = 363

 Score =  242 bits (617), Expect = 9e-62
 Identities = 126/203 (62%), Positives = 140/203 (68%)
 Frame = -1

Query: 868 CEICGSVAVNIRPSDFEKVVASLKDYETLMQKTVSGEPTSTHVRRNSAVDPDAVAGIRRQ 689
           CEICG +A NIR SDF KVV +LK+YE L ++T SG+P + HV  N+ VDPDAVA IRRQ
Sbjct: 161 CEICGHIANNIRISDFNKVVGALKEYEVLRERTASGDPGAAHVHANAVVDPDAVAAIRRQ 220

Query: 688 RLSEIALWFNIHMXXXXXXXXXXXTVSQGVIELSANNTMEGALTNENRATKWAVEXXXXX 509
           RLSEIALWF  +            TVSQ V E   +   E A   +N ATKWAVE     
Sbjct: 221 RLSEIALWFCPYNNSHNNNISSVDTVSQIVSEQPLSIVTEDAAPTQNPATKWAVEGTGIL 280

Query: 508 XXXXXXXXXXAWLIAPHVGKRTAKMGLRILLGGVCALTVVIFLRFIVLTRIKYGPARYWA 329
                     AWLIAP VGK+TA+ GL ILLGGVCAL VV+F RF VLTRIKYGPARYWA
Sbjct: 281 LATGLLTITLAWLIAPRVGKKTARSGLHILLGGVCALAVVVFFRFFVLTRIKYGPARYWA 340

Query: 328 ILFVFWFLVFGIWASRTHGAHKT 260
           ILFVFWFLVFGIWASRTHGAH T
Sbjct: 341 ILFVFWFLVFGIWASRTHGAHTT 363


>ref|XP_002273487.1| PREDICTED: uncharacterized protein LOC100243998 [Vitis vinifera]
          Length = 365

 Score =  242 bits (617), Expect = 9e-62
 Identities = 128/203 (63%), Positives = 140/203 (68%)
 Frame = -1

Query: 868 CEICGSVAVNIRPSDFEKVVASLKDYETLMQKTVSGEPTSTHVRRNSAVDPDAVAGIRRQ 689
           CEICG +A N+R SDF+KVV SLK+YE L ++T SGEP    VR N  VDPDAVA I+RQ
Sbjct: 166 CEICGCIAKNVRTSDFKKVVGSLKEYEALRERTASGEPV-VQVRTNLGVDPDAVAAIQRQ 224

Query: 688 RLSEIALWFNIHMXXXXXXXXXXXTVSQGVIELSANNTMEGALTNENRATKWAVEXXXXX 509
           RLSEI+LWFN H              SQ V E   N   E  +  EN ATKWAVE     
Sbjct: 225 RLSEISLWFNPH--NNNNNNNNSAVASQVVSEQHLNIVAEDFVPAENPATKWAVEGTGIL 282

Query: 508 XXXXXXXXXXAWLIAPHVGKRTAKMGLRILLGGVCALTVVIFLRFIVLTRIKYGPARYWA 329
                     AWLIAP VGK+TAK GL ILLGG+CALTVV+F RFIVLTRIKYGPARYWA
Sbjct: 283 LATGLLTVTLAWLIAPRVGKKTAKSGLHILLGGICALTVVVFFRFIVLTRIKYGPARYWA 342

Query: 328 ILFVFWFLVFGIWASRTHGAHKT 260
           ILFVFWFLVFGIWASRTHGAH T
Sbjct: 343 ILFVFWFLVFGIWASRTHGAHTT 365


>ref|XP_002310542.1| predicted protein [Populus trichocarpa] gi|222853445|gb|EEE90992.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  237 bits (604), Expect = 3e-60
 Identities = 126/204 (61%), Positives = 141/204 (69%), Gaps = 1/204 (0%)
 Frame = -1

Query: 868 CEICGSVAVNIRPSDFEKVVASLKDYETLMQKTVSGEPTSTHVRRNSAVDPDAVAGIRRQ 689
           CEICG VA+NIR  DF+KV+ +LKDYE L ++T  G+P    V  ++ VDPDAVA +RRQ
Sbjct: 165 CEICGHVAINIRTLDFKKVMVALKDYEALRERTAIGDPNPAQVHTSAGVDPDAVAAVRRQ 224

Query: 688 RLSEIALWFNIHMXXXXXXXXXXXT-VSQGVIELSANNTMEGALTNENRATKWAVEXXXX 512
           RLSEI+LWF+ H            T VSQ V E   N  ME  +  EN ATKWAVE    
Sbjct: 225 RLSEISLWFSPHNNHNNNYNNNNSTAVSQVVSEQPLNTVMED-VPAENPATKWAVEATGI 283

Query: 511 XXXXXXXXXXXAWLIAPHVGKRTAKMGLRILLGGVCALTVVIFLRFIVLTRIKYGPARYW 332
                      AWLIAP VGK+TAK GL ILLGGVCALTVV+F RFIVLTRIKYGPARYW
Sbjct: 284 LLATGLLTVTLAWLIAPRVGKKTAKSGLHILLGGVCALTVVVFFRFIVLTRIKYGPARYW 343

Query: 331 AILFVFWFLVFGIWASRTHGAHKT 260
           AILFVFWFLVFGIWASRTH AH T
Sbjct: 344 AILFVFWFLVFGIWASRTHDAHTT 367


>ref|XP_003630350.1| Zinc finger protein [Medicago truncatula]
           gi|355524372|gb|AET04826.1| Zinc finger protein
           [Medicago truncatula]
          Length = 358

 Score =  227 bits (579), Expect = 2e-57
 Identities = 121/203 (59%), Positives = 135/203 (66%)
 Frame = -1

Query: 868 CEICGSVAVNIRPSDFEKVVASLKDYETLMQKTVSGEPTSTHVRRNSAVDPDAVAGIRRQ 689
           CEICG +A NIR +DF KV+ SLK+YE L ++TV+G+        N+ VDPDAVA IRRQ
Sbjct: 156 CEICGHIANNIRIADFNKVIGSLKEYEALRERTVNGDLGPAQDHPNTGVDPDAVAAIRRQ 215

Query: 688 RLSEIALWFNIHMXXXXXXXXXXXTVSQGVIELSANNTMEGALTNENRATKWAVEXXXXX 509
           RLSEIALWF  H            +VSQ V E   N  +E     +N  TKWAVE     
Sbjct: 216 RLSEIALWFCPHNSNNFNNNSNVDSVSQLVSEQPLNFIVEEPEPVQNTRTKWAVECTGIL 275

Query: 508 XXXXXXXXXXAWLIAPHVGKRTAKMGLRILLGGVCALTVVIFLRFIVLTRIKYGPARYWA 329
                     AWLIAP VGK+TA  GL ILLGGVCALTVVIF RF VLTRI+YGPARYWA
Sbjct: 276 LATGLLTITLAWLIAPRVGKKTAGSGLHILLGGVCALTVVIFFRFFVLTRIRYGPARYWA 335

Query: 328 ILFVFWFLVFGIWASRTHGAHKT 260
           ILFVFWFLVFGIWASRTH AH T
Sbjct: 336 ILFVFWFLVFGIWASRTHSAHTT 358


Top