BLASTX nr result
ID: Coptis23_contig00011542
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00011542
(949 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003603826.1| Helicase-like protein [Medicago truncatula] ... 52 5e-25
ref|XP_003605542.1| Helicase-like protein [Medicago truncatula] ... 51 1e-24
ref|XP_003605523.1| Helicase-like protein [Medicago truncatula] ... 51 1e-24
ref|XP_003605521.1| Helicase-like protein [Medicago truncatula] ... 51 1e-24
ref|XP_003525743.1| PREDICTED: uncharacterized protein LOC100807... 58 1e-21
>ref|XP_003603826.1| Helicase-like protein [Medicago truncatula]
gi|355492874|gb|AES74077.1| Helicase-like protein
[Medicago truncatula]
Length = 1679
Score = 52.4 bits (124), Expect(4) = 5e-25
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = -1
Query: 640 CRWAGPPSLFITFTCNPNWPEIKEVLEKSGQKAADRLDTI 521
C W G P LFITFTCN WPE+ E L+K K DR D +
Sbjct: 668 CGWVGYPDLFITFTCNHKWPELLEFLKKHNLKPEDRPDLV 707
Score = 49.7 bits (117), Expect(4) = 5e-25
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -3
Query: 854 LHQQYVVDAYACIEEARLWWYRNNRATVRAELYKGLVVRLL 732
L QQ++VDAY+ IE RL WYR+++ VRA+LYKGL +L
Sbjct: 591 LFQQFLVDAYSMIESWRLKWYRDHQKEVRADLYKGLAEAVL 631
Score = 45.8 bits (107), Expect(4) = 5e-25
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -2
Query: 420 KEGL--SAILLFLHPADKPTIISDVDNIISEELPDKMNDPIGYERVVQFLINGSCIQLRK 247
K GL + IL+FL + + +D IIS E+PDK DP YE V +I+G C K
Sbjct: 742 KRGLPHAHILVFLRAEFRCLHPNQIDKIISAEIPDKNRDPKLYEIVASLMIHGPCGPQNK 801
Query: 246 DAHCTNTGKCSR 211
+ C KC++
Sbjct: 802 SSPCILIKKCTK 813
Score = 33.1 bits (74), Expect(4) = 5e-25
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 521 SRFFXXXXXXXXXXLRHGRRFGHVNAVAYTIEFQKRG 411
SR F ++ G+ FG V AV Y IEFQKRG
Sbjct: 708 SRLFKIKLDHLIKEIKKGKIFGKVKAVIYIIEFQKRG 744
>ref|XP_003605542.1| Helicase-like protein [Medicago truncatula]
gi|355506597|gb|AES87739.1| Helicase-like protein
[Medicago truncatula]
Length = 1641
Score = 51.2 bits (121), Expect(4) = 1e-24
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = -1
Query: 640 CRWAGPPSLFITFTCNPNWPEIKEVLEKSGQKAADRLDTI 521
C W G P LFITFTCN WPE+ + L+K K DR D +
Sbjct: 564 CGWVGYPDLFITFTCNHKWPELVDFLKKHNLKPEDRPDLV 603
Score = 50.8 bits (120), Expect(4) = 1e-24
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -3
Query: 854 LHQQYVVDAYACIEEARLWWYRNNRATVRAELYKGLVVRLL 732
L QQ++VDA++ IE RL WYRN++ VRA+LYKGL +L
Sbjct: 487 LFQQFLVDAFSMIESWRLMWYRNHQKEVRADLYKGLAEAVL 527
Score = 42.4 bits (98), Expect(4) = 1e-24
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2
Query: 402 ILLFLHPADKPTIISDVDNIISEELPDKMNDPIGYERVVQFLINGSC 262
IL+FL P + + +D IIS E+PDK DP Y+ V +I+G C
Sbjct: 646 ILVFLRPESRCKHPNQIDKIISAEIPDKNRDPRLYDIVASLMIHGPC 692
Score = 35.4 bits (80), Expect(4) = 1e-24
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -3
Query: 521 SRFFXXXXXXXXXXLRHGRRFGHVNAVAYTIEFQKRG 411
SR F ++ G+ FG V AV YTIEFQKRG
Sbjct: 604 SRLFKIKLDHLIKYIKKGKIFGKVKAVIYTIEFQKRG 640
>ref|XP_003605523.1| Helicase-like protein [Medicago truncatula]
gi|355506578|gb|AES87720.1| Helicase-like protein
[Medicago truncatula]
Length = 1585
Score = 51.2 bits (121), Expect(4) = 1e-24
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = -1
Query: 640 CRWAGPPSLFITFTCNPNWPEIKEVLEKSGQKAADRLDTI 521
C W G P LFITFTCN WPE+ + L+K K DR D +
Sbjct: 564 CGWVGYPDLFITFTCNHKWPELVDFLKKHNLKPEDRPDLV 603
Score = 50.8 bits (120), Expect(4) = 1e-24
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -3
Query: 854 LHQQYVVDAYACIEEARLWWYRNNRATVRAELYKGLVVRLL 732
L QQ++VDA++ IE RL WYRN++ VRA+LYKGL +L
Sbjct: 487 LFQQFLVDAFSMIESWRLMWYRNHQKEVRADLYKGLAEAVL 527
Score = 42.4 bits (98), Expect(4) = 1e-24
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2
Query: 402 ILLFLHPADKPTIISDVDNIISEELPDKMNDPIGYERVVQFLINGSC 262
IL+FL P + + +D IIS E+PDK DP Y+ V +I+G C
Sbjct: 646 ILVFLRPESRCKHPNQIDKIISAEIPDKNRDPRLYDIVASLMIHGPC 692
Score = 35.4 bits (80), Expect(4) = 1e-24
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -3
Query: 521 SRFFXXXXXXXXXXLRHGRRFGHVNAVAYTIEFQKRG 411
SR F ++ G+ FG V AV YTIEFQKRG
Sbjct: 604 SRLFKIKLDHLIKYIKKGKIFGKVKAVIYTIEFQKRG 640
>ref|XP_003605521.1| Helicase-like protein [Medicago truncatula]
gi|355506576|gb|AES87718.1| Helicase-like protein
[Medicago truncatula]
Length = 1262
Score = 51.2 bits (121), Expect(4) = 1e-24
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = -1
Query: 640 CRWAGPPSLFITFTCNPNWPEIKEVLEKSGQKAADRLDTI 521
C W G P LFITFTCN WPE+ + L+K K DR D +
Sbjct: 564 CGWVGYPDLFITFTCNHKWPELVDFLKKHNLKPEDRPDLV 603
Score = 50.8 bits (120), Expect(4) = 1e-24
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -3
Query: 854 LHQQYVVDAYACIEEARLWWYRNNRATVRAELYKGLVVRLL 732
L QQ++VDA++ IE RL WYRN++ VRA+LYKGL +L
Sbjct: 487 LFQQFLVDAFSMIESWRLMWYRNHQKEVRADLYKGLAEAVL 527
Score = 42.4 bits (98), Expect(4) = 1e-24
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2
Query: 402 ILLFLHPADKPTIISDVDNIISEELPDKMNDPIGYERVVQFLINGSC 262
IL+FL P + + +D IIS E+PDK DP Y+ V +I+G C
Sbjct: 646 ILVFLRPESRCKHPNQIDKIISAEIPDKNRDPRLYDIVASLMIHGPC 692
Score = 35.4 bits (80), Expect(4) = 1e-24
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -3
Query: 521 SRFFXXXXXXXXXXLRHGRRFGHVNAVAYTIEFQKRG 411
SR F ++ G+ FG V AV YTIEFQKRG
Sbjct: 604 SRLFKIKLDHLIKYIKKGKIFGKVKAVIYTIEFQKRG 640
>ref|XP_003525743.1| PREDICTED: uncharacterized protein LOC100807389 [Glycine max]
Length = 1732
Score = 57.8 bits (138), Expect(4) = 1e-21
Identities = 28/64 (43%), Positives = 38/64 (59%)
Frame = -2
Query: 402 ILLFLHPADKPTIISDVDNIISEELPDKMNDPIGYERVVQFLINGSCIQLRKDAHCTNTG 223
+LLFLHP +K +D+D IIS E+P DP Y V +I+G C L+ ++ C G
Sbjct: 819 LLLFLHPDNKYPSSTDIDKIISAEIPSHQEDPELYRLVENHMIHGPCGILQSNSPCMKEG 878
Query: 222 KCSR 211
KCSR
Sbjct: 879 KCSR 882
Score = 47.8 bits (112), Expect(4) = 1e-21
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -1
Query: 640 CRWAGPPSLFITFTCNPNWPEIKEVLEKSGQKAADRLDTI 521
C G P+LFIT TCNP+WPEI+ +L K DR D +
Sbjct: 737 CSHVGFPNLFITLTCNPSWPEIRRLLSPLNLKPTDRPDIV 776
Score = 37.0 bits (84), Expect(4) = 1e-21
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -3
Query: 884 QSGKMDLLLH---LHQQYVVDAYACIEEARLWWYRNNRATVRAELYKGLVVRL 735
+S + LLH L QQ++V+ Y +E RL + RNN+ +R + Y L L
Sbjct: 647 RSNEAQTLLHSRKLFQQFIVEGYTMVESERLSYIRNNQNKLRVDKYSSLQTSL 699
Score = 26.9 bits (58), Expect(4) = 1e-21
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -3
Query: 521 SRFFXXXXXXXXXXLRHGRRFGHVNAVAYTIEFQKRG 411
SR F L G+ G V A +TIEFQKRG
Sbjct: 777 SRIFRLKYEHMLSDLTKGQLLGKVVAYMHTIEFQKRG 813