BLASTX nr result

ID: Coptis23_contig00011539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011539
         (1338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27911.3| unnamed protein product [Vitis vinifera]              233   1e-58
ref|XP_002279617.1| PREDICTED: uncharacterized protein LOC100266...   233   1e-58
ref|XP_002309197.1| predicted protein [Populus trichocarpa] gi|2...   227   6e-57
ref|XP_002514110.1| conserved hypothetical protein [Ricinus comm...   209   2e-51
ref|XP_002876547.1| hypothetical protein ARALYDRAFT_486503 [Arab...   167   6e-39

>emb|CBI27911.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  233 bits (593), Expect = 1e-58
 Identities = 158/411 (38%), Positives = 224/411 (54%), Gaps = 20/411 (4%)
 Frame = -2

Query: 1337 SMEVGSQLPFSDAYFANEHKMLAVLLGPFSCESFLGLAHHVRESDILAQKCSHQTFEDNT 1158
            S+E+GS+LPFS AYF   H +  +L G  S ESFL L   +      A   S  T +   
Sbjct: 258  SVEMGSKLPFSIAYFPYNHHVYRILSGTLSSESFLHLVSIINVPISRAGNHSMPTIKQVP 317

Query: 1157 TWKKLINYRSTWAQLVAFPEWFFFAAILLFSKNGCQFAFWSRCISSAVTTEHTCDAEQCC 978
                 I ++S WA  + FP+WFFFA++LLFS+   Q  F+S+C      TE   D E  C
Sbjct: 318  MKISTIGHKSVWAAAMNFPDWFFFASVLLFSEKSFQDNFYSKCGIGVPRTEKRHDVEPLC 377

Query: 977  --AAAARYLAYIISPMSEIHHDLLVKNLIQLSESWVKRC--SSNMKKGTYGCTKNLRKLE 810
              +AAARY+A+I+SP  + H DLLV  L +LSESW  +   S    K      K L+K +
Sbjct: 378  FSSAAARYIAWILSPADKSHQDLLVDWLTKLSESWTLKQFGSDTYNKEIADYRKKLKKTK 437

Query: 809  LRDKGKDNVAAKEIHSQALRLWLKDFHDCHVRYWTDIIKKSLFKGARKQNTSFLLQ---N 639
                  D    KE +   + LWLK+F + + +          F    + N S+ L+   +
Sbjct: 438  FPVYKGDYNLPKEYNYVTIVLWLKEFQNSYTKNQYKTASSLAFC---EHNLSYSLRFQHS 494

Query: 638  LLFRKISLGIFIGHSN-LHEEGCELLLHYVATGDI--LRSTGT---RDIELKDEIQKHK- 480
            +LFR+I LGI IG    L E GCE+LLHY ATG I  LR T +   + ++L  E QK   
Sbjct: 495  VLFRRIPLGILIGCPYYLDESGCEMLLHYSATGTIPLLRETHSGALKHLKLDSEGQKDSI 554

Query: 479  ------STDDAVAGVRLVFDLFDVIESMSSSIFETDENRLSFVCQLKMKAVRFIVKCIKR 318
                  + ++A AG  LVF L DV+ SM++S+FETDE+ L F+CQ+K+KA R+++KCIK+
Sbjct: 555  MWTEEYTKEEAAAGASLVFRLTDVVLSMAASLFETDESGLEFICQVKVKAGRYLIKCIKK 614

Query: 317  LLEDIKDWDTCKMSMLFDLHKRLERWSYQEGDIIKRSKPLEDVLSALHCKI 165
            LL+   D       ML DL  RL +W  Q  ++ +    L+DV++ L  K+
Sbjct: 615  LLQ-FNDG-----IMLMDLFNRLVQWRNQGQEVFQGCTDLDDVINGLGLKL 659


>ref|XP_002279617.1| PREDICTED: uncharacterized protein LOC100266211 [Vitis vinifera]
          Length = 698

 Score =  233 bits (593), Expect = 1e-58
 Identities = 158/411 (38%), Positives = 224/411 (54%), Gaps = 20/411 (4%)
 Frame = -2

Query: 1337 SMEVGSQLPFSDAYFANEHKMLAVLLGPFSCESFLGLAHHVRESDILAQKCSHQTFEDNT 1158
            S+E+GS+LPFS AYF   H +  +L G  S ESFL L   +      A   S  T +   
Sbjct: 294  SVEMGSKLPFSIAYFPYNHHVYRILSGTLSSESFLHLVSIINVPISRAGNHSMPTIKQVP 353

Query: 1157 TWKKLINYRSTWAQLVAFPEWFFFAAILLFSKNGCQFAFWSRCISSAVTTEHTCDAEQCC 978
                 I ++S WA  + FP+WFFFA++LLFS+   Q  F+S+C      TE   D E  C
Sbjct: 354  MKISTIGHKSVWAAAMNFPDWFFFASVLLFSEKSFQDNFYSKCGIGVPRTEKRHDVEPLC 413

Query: 977  --AAAARYLAYIISPMSEIHHDLLVKNLIQLSESWVKRC--SSNMKKGTYGCTKNLRKLE 810
              +AAARY+A+I+SP  + H DLLV  L +LSESW  +   S    K      K L+K +
Sbjct: 414  FSSAAARYIAWILSPADKSHQDLLVDWLTKLSESWTLKQFGSDTYNKEIADYRKKLKKTK 473

Query: 809  LRDKGKDNVAAKEIHSQALRLWLKDFHDCHVRYWTDIIKKSLFKGARKQNTSFLLQ---N 639
                  D    KE +   + LWLK+F + + +          F    + N S+ L+   +
Sbjct: 474  FPVYKGDYNLPKEYNYVTIVLWLKEFQNSYTKNQYKTASSLAFC---EHNLSYSLRFQHS 530

Query: 638  LLFRKISLGIFIGHSN-LHEEGCELLLHYVATGDI--LRSTGT---RDIELKDEIQKHK- 480
            +LFR+I LGI IG    L E GCE+LLHY ATG I  LR T +   + ++L  E QK   
Sbjct: 531  VLFRRIPLGILIGCPYYLDESGCEMLLHYSATGTIPLLRETHSGALKHLKLDSEGQKDSI 590

Query: 479  ------STDDAVAGVRLVFDLFDVIESMSSSIFETDENRLSFVCQLKMKAVRFIVKCIKR 318
                  + ++A AG  LVF L DV+ SM++S+FETDE+ L F+CQ+K+KA R+++KCIK+
Sbjct: 591  MWTEEYTKEEAAAGASLVFRLTDVVLSMAASLFETDESGLEFICQVKVKAGRYLIKCIKK 650

Query: 317  LLEDIKDWDTCKMSMLFDLHKRLERWSYQEGDIIKRSKPLEDVLSALHCKI 165
            LL+   D       ML DL  RL +W  Q  ++ +    L+DV++ L  K+
Sbjct: 651  LLQ-FNDG-----IMLMDLFNRLVQWRNQGQEVFQGCTDLDDVINGLGLKL 695


>ref|XP_002309197.1| predicted protein [Populus trichocarpa] gi|222855173|gb|EEE92720.1|
            predicted protein [Populus trichocarpa]
          Length = 696

 Score =  227 bits (578), Expect = 6e-57
 Identities = 147/400 (36%), Positives = 221/400 (55%), Gaps = 13/400 (3%)
 Frame = -2

Query: 1337 SMEVGSQLPFSDAYFANEHKMLAVLLGPFSCESFLGLAHHVRESDILAQKCSHQTFEDNT 1158
            S+E+G +LPFS++YF  +   L  L GPFS ESFL L H  R+S  L ++      + + 
Sbjct: 301  SLELGLKLPFSNSYFPYKSDFLRTLTGPFSYESFLQLVHMTRKSAYLHRELCDPAIKPSA 360

Query: 1157 TWKKLINYRSTWAQLVAFPEWFFFAAILLFSKN-GCQFAFWSRCISSAVTTEHTCDAEQC 981
                 I+++S WA  ++FP+WF+FA++LLFS +   Q     +C                
Sbjct: 361  VRVASIDHKSIWALAISFPDWFYFASVLLFSDDKNSQQNIQVKCPLGVPEFGQL----PA 416

Query: 980  CAAAARYLAYIISPMSEIHHDLLVKNLIQLSESW-VKRCSS-NMKKGTYGCTKNLRKLEL 807
             AAAA ++A+I+SP+++ + D L +NL +LS+ W +K  SS N + G  G  K L+K   
Sbjct: 417  SAAAATFIAWILSPVNKSNQDALFENLTKLSKCWNLKEISSDNSQNGMAGYKKKLKKPRF 476

Query: 806  RDKGKDNVAAKEIHSQALRLWLKDFHDCHVRYWTDIIKKSLFKGARKQNTSFLLQNLLFR 627
             D  +D+    +   Q + LWLK F   ++    + I +  F  A K        + LFR
Sbjct: 477  CDSNEDSTLGNKYDCQVIILWLKQFQ--NIMKHNETIDELAFCEA-KSYALLPQHDKLFR 533

Query: 626  KISLGIFIGHSN-LHEEGCELLLHYVATGDILRSTGTRDIELK---------DEIQKHKS 477
            +I LGI  G S  ++E+GCELLLHY ATG IL S GT +  LK         +++    +
Sbjct: 534  RIPLGILTGSSGYINEDGCELLLHYAATGRILDSLGTENTSLKHVNYNSSGPEDLFGGIN 593

Query: 476  TDDAVAGVRLVFDLFDVIESMSSSIFETDENRLSFVCQLKMKAVRFIVKCIKRLLEDIKD 297
             ++AV G  LVF L DV++ MS S+FET++    F+C +K++A R+++KCIKRL     D
Sbjct: 594  KEEAVLGACLVFSLTDVVDRMSVSLFETEKTGEDFLCLVKLRAGRYLLKCIKRLTHFNVD 653

Query: 296  WDTCKMSMLFDLHKRLERWSYQEGDIIKRSKPLEDVLSAL 177
             D   + ML DL  RLERW +Q  ++ +  K L+D L  L
Sbjct: 654  ED--GVPMLLDLQGRLERWRHQGKEVPEFHKDLDDALKGL 691


>ref|XP_002514110.1| conserved hypothetical protein [Ricinus communis]
            gi|223546566|gb|EEF48064.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 694

 Score =  209 bits (531), Expect = 2e-51
 Identities = 141/408 (34%), Positives = 221/408 (54%), Gaps = 21/408 (5%)
 Frame = -2

Query: 1337 SMEVGSQLPFSDAYFANEHKMLAVLLGPFSCESFLGLAHHVRESDILAQKCSHQTFEDNT 1158
            SME+GS+LP+++AYF  ++ +L +L+GP S  SFL L +   ES     +   +T + + 
Sbjct: 291  SMELGSKLPYANAYFPYKNHLLRILVGPLSSISFLQLVYRTTESVSHIMEQFGRTCKASV 350

Query: 1157 TWKKLINYRSTWAQLVAFPEWFFFAAILLFSKNGCQFAFWSRCISSAVTTEHTCDAEQC- 981
                    +S WA  + FP+WF+FA++LLFS N  Q +  S+ I     +  T + EQ  
Sbjct: 351  LKIASTESKSIWALAICFPDWFYFASVLLFSTNCFQKSHQSKRIFGVPKSGKTNNKEQSP 410

Query: 980  -CAAAARYLAYIISPMSEIHHDLLVKNLIQLSESWVKRCSSNMKKGTYG-----CTKNLR 819
              AAAARY+A+I+SP ++   D L   L ++SE W  R    +  GT G     C K L+
Sbjct: 411  PAAAAARYIAWILSPNNQSQQDWLFGGLTKISEFWTLR---QIDLGTSGRDIASCRKKLK 467

Query: 818  KLELRDKGKDNVAAKEIHSQALRLWLKDFHDCHVRYWTDIIKKSLFKGARKQNTSFLLQN 639
              +  +  +D     E + Q + LWLK+F    +++  + +  +L+             +
Sbjct: 468  NSKCYNIEEDFSLGTEDNCQTIGLWLKEFQSI-MKHGNESVN-NLYSCEANSYVFAFENH 525

Query: 638  LLFRKISLGIFIGH-SNLHEEGCELLLHYVATGDILRSTGTRDIELKDEIQKHK------ 480
            + FR+I LGI IG  S ++E+G ELLLHY ATG +L  T   D   KD ++K        
Sbjct: 526  MFFRRIPLGILIGFPSYVNEDGFELLLHYAATGRMLPLTTKND--RKDHLEKKSMGLEDL 583

Query: 479  -----STDDAVAGVRLVFDLFDVIESMSSSIFETDENRLSFVCQLKMKAVRFIVKCIKRL 315
                 S  +AVAG  LVF L D +E +S+S+FE +++ L  + Q+K++A R+++KC+K L
Sbjct: 584  GLGSNSKKEAVAGACLVFSLSDTVERISASLFENEKSGLDAISQVKLRAGRYLIKCLKSL 643

Query: 314  --LEDIKDWDTCKMSMLFDLHKRLERWSYQEGDIIKRSKPLEDVLSAL 177
              L   +D    +M    DLH RLERW +Q  +++   K L+D + AL
Sbjct: 644  IQLNIAEDGHATQM----DLHDRLERWRHQGQEMLNIDKDLDDAIKAL 687


>ref|XP_002876547.1| hypothetical protein ARALYDRAFT_486503 [Arabidopsis lyrata subsp.
            lyrata] gi|297322385|gb|EFH52806.1| hypothetical protein
            ARALYDRAFT_486503 [Arabidopsis lyrata subsp. lyrata]
          Length = 685

 Score =  167 bits (423), Expect = 6e-39
 Identities = 131/409 (32%), Positives = 209/409 (51%), Gaps = 20/409 (4%)
 Frame = -2

Query: 1334 MEVGSQLPFSDAYFANEHKMLAVLLGPFSCESFLGLAHHVRESDILAQKCSHQTFEDNTT 1155
            ME+ S+LPFSD YF ++ + L +L GP S +S L LAH V ++  + ++    T    T 
Sbjct: 293  MELASRLPFSDTYFPSQCQFLRILAGPLSFKSLLMLAHTVSKASAVPRQQQRDTNCKPTP 352

Query: 1154 WK-KLINYRSTWAQLVAFPEWFFFAAILLFSKNGCQFAFWSRCISSAVTTEHTCDAEQCC 978
             K + ++ ++ WA  + FP+WF+FA+ +LFS+         RC S        CD E   
Sbjct: 353  IKVQALDDKTEWALAINFPDWFYFASAMLFSEGNSFENIQHRCTSKVADCRQACDVEDLS 412

Query: 977  AAAARYLAYIISPMSEIHHDLLVKNLIQLSESWVKRCSSNMKKGTYGCTKNLRKLELRDK 798
             AAA Y+A+I++P S      + K+LI++SE  +     +    T   T   +K +    
Sbjct: 413  IAAATYIAWILNPGSGTIQVSVSKSLIRVSEICIGNSCGSEAHRTETITGKRKKPDRLVS 472

Query: 797  GKDNVAAKEIHSQALRLWLKDFHDCHVRYWTDIIKKSLFKGARKQNTSF---LLQNLLFR 627
            GK  + +  I    LR    DF +      T+ +   L   +RK + SF   L  N L R
Sbjct: 473  GK--IKSSSIVEDILR----DFEN----KITNSVSYEL--DSRKTHPSFSCGLQNNFLVR 520

Query: 626  KISLGIFIGHS-NLHEEGCELLLHYVATGDIL-----RSTGTRDIE--------LKDEIQ 489
            ++ +GI  G   ++ +E  EL+LHY ATG IL     RSTG +  +        L +EI 
Sbjct: 521  RVVVGILFGSPYSVTDEEYELVLHYAATGKILAFKKSRSTGFKQGKGFSGISALLPNEIT 580

Query: 488  KHKSTDDAVAGVRLVFDLFDVIESMSSSIFETDENRLSFVCQLKMKAVRFIVKCIKRL-- 315
            K    ++A+ G  LVF+L D +ESM  S FE  E+   F+   K+++ +++VKCI RL  
Sbjct: 581  K----EEAIEGTLLVFNLTDTLESMCVSSFEAGEDAEKFINHFKLRSSKYLVKCIDRLIQ 636

Query: 314  LEDIKDWDTCKMSMLFDLHKRLERWSYQEGDIIKRSKPLEDVLSALHCK 168
            L   +D D     +L D++ RL +W+ +  +    +K L+++ + L CK
Sbjct: 637  LHCTEDGD----PILSDINIRLLQWTIKGLEDPHFNKVLDNIAAKLDCK 681


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