BLASTX nr result

ID: Coptis23_contig00011524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011524
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280572.2| PREDICTED: uncharacterized protein LOC100246...    61   8e-08
ref|XP_002511476.1| conserved hypothetical protein [Ricinus comm...    59   3e-07
emb|CBI15106.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002517428.1| hypothetical protein RCOM_0853160 [Ricinus c...    55   6e-06

>ref|XP_002280572.2| PREDICTED: uncharacterized protein LOC100246721 [Vitis vinifera]
          Length = 531

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/98 (37%), Positives = 54/98 (55%)
 Frame = +3

Query: 21  LEKCFSGNADLASIILKSKVPELYRNRYTQRIRAFERNLPDGKSPLLMQTEDQESNLKTG 200
           +E CF  N D ASI+ +SK PELYRN  TQRIRAFE +L +GK  L  Q +   +    G
Sbjct: 184 MENCFVANRDFASIVTRSKEPELYRNGCTQRIRAFESSLLEGKLSLSGQVDGAMNETTIG 243

Query: 201 PTTKEDITAEVTCVVAPPREFDVRIAEKKSDVMEDEHQ 314
              +E+   E   + + P++ +V   E+  D  ++  Q
Sbjct: 244 ---EEEEGGEGIYMTSIPKDDNVCRMERNPDEAKEIRQ 278


>ref|XP_002511476.1| conserved hypothetical protein [Ricinus communis]
           gi|223550591|gb|EEF52078.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 559

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
 Frame = +3

Query: 24  EKCFSGNADLASIILKSKVPELYRNRYTQRIRAFERNLPDGKSPLLMQTEDQESNL---- 191
           + CF  N D ASI+++SK PELYRN  TQRIRAFER+L  G   L  Q +D ++ +    
Sbjct: 185 DNCFVCNPDFASIVMRSKEPELYRNGCTQRIRAFERSLLGGNLSLSGQDDDVKNQVFIIE 244

Query: 192 -KTGPTTKEDITAEV 233
            K     ++ +TA+V
Sbjct: 245 DKEDKDIRKQLTAKV 259


>emb|CBI15106.3| unnamed protein product [Vitis vinifera]
          Length = 422

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/51 (56%), Positives = 35/51 (68%)
 Frame = +3

Query: 21  LEKCFSGNADLASIILKSKVPELYRNRYTQRIRAFERNLPDGKSPLLMQTE 173
           +E CF  N D ASI+ +SK PELYRN  TQRIRAFE +L +GK  L  Q +
Sbjct: 184 MENCFVANRDFASIVTRSKEPELYRNGCTQRIRAFESSLLEGKLSLSGQVD 234


>ref|XP_002517428.1| hypothetical protein RCOM_0853160 [Ricinus communis]
           gi|223543439|gb|EEF44970.1| hypothetical protein
           RCOM_0853160 [Ricinus communis]
          Length = 611

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = +3

Query: 21  LEKCFSGNADLASIILKSKVPELYRNRYTQRIRAFERNLPDGKSP 155
           LE   S NA+LASII+++K PELYRN +TQRIRA E N+  GK P
Sbjct: 147 LENHSSQNAELASIIIRNKEPELYRNGFTQRIRALEGNILAGKLP 191


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