BLASTX nr result

ID: Coptis23_contig00011516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011516
         (1801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329979.1| predicted protein [Populus trichocarpa] gi|2...   593   e-167
ref|XP_002512601.1| conserved hypothetical protein [Ricinus comm...   593   e-167
ref|XP_004144735.1| PREDICTED: transmembrane protein 184B-like [...   591   e-166
ref|XP_003626112.1| Transmembrane protein 184A [Medicago truncat...   582   e-164
ref|XP_003521636.1| PREDICTED: transmembrane protein 184A-like [...   578   e-162

>ref|XP_002329979.1| predicted protein [Populus trichocarpa]
            gi|224124264|ref|XP_002329980.1| predicted protein
            [Populus trichocarpa] gi|118487141|gb|ABK95399.1| unknown
            [Populus trichocarpa] gi|222871404|gb|EEF08535.1|
            predicted protein [Populus trichocarpa]
            gi|222871405|gb|EEF08536.1| predicted protein [Populus
            trichocarpa]
          Length = 420

 Score =  593 bits (1530), Expect = e-167
 Identities = 297/401 (74%), Positives = 323/401 (80%), Gaps = 1/401 (0%)
 Frame = -3

Query: 1559 MAPIYFIIIAFPCVVGAIVLAVVHIYRHLMNYTEPTYQRFIVRIIFMVPVYALMSFLSLL 1380
            + PIYF IIAF C +GA+ LA+ HIYRHL+NYTEPTYQR+IVRIIFMVPVYALMSFLSL+
Sbjct: 4    LLPIYFSIIAFFCALGAMALAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLI 63

Query: 1379 LNESSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLTLSGRVLKPSWCLMTCCFSPI 1200
              ESSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVL+LSGR +KPSWCLMTCCF P+
Sbjct: 64   FPESSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRAMKPSWCLMTCCFPPV 123

Query: 1199 PLDGRFIRRCKQGALQFVILKPILVALTFILYAKGKYEDGNFSAKQGXXXXXXXXXXXXX 1020
            PLDGRFIRRCKQG LQFVILKP LVA+T ILYAKGKY+DGNFS  Q              
Sbjct: 124  PLDGRFIRRCKQGCLQFVILKPFLVAVTLILYAKGKYKDGNFSPNQSYLYLTIIYTISYT 183

Query: 1019 XXXXXXXXXXXACKDLLRPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSGFIKNTGEAAE 840
                       ACKDLL+PFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSGFIK+  EAA+
Sbjct: 184  MALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSGFIKDAEEAAQ 243

Query: 839  FQNFIVCVEMLIAAVGHLYAFPYKEYAGANIGASGGLTGSLGHALKFNDFYHDTVHQFAP 660
            FQ+FI+CVEMLIAAVGHLYAFPYKEYAGANI  S  LT SL HALK ND YHDTVHQFAP
Sbjct: 244  FQDFIICVEMLIAAVGHLYAFPYKEYAGANIAGSCDLTRSLAHALKLNDLYHDTVHQFAP 303

Query: 659  TYHDYVLYNHNEGDDGTRKYRSRTFVPTGQEMDTVRKNKLVIGTRIDEIQLXXXXXXXXX 480
            TYHDYVLYNH EGD+GTRKYRSRTFVPTG EMD VRKNKLV G +IDEIQL         
Sbjct: 304  TYHDYVLYNHTEGDEGTRKYRSRTFVPTGHEMDAVRKNKLVFGNKIDEIQLSSQSSSATS 363

Query: 479  XXXXXTA-QDYIDPEAMKSSLLMDYSNSFAQPYDVSLVDMD 360
                 T+  +    +AMKSSLL+D SNS + PYD+SL+DMD
Sbjct: 364  TPKNDTSVLNSAHSDAMKSSLLVDSSNSVSAPYDMSLIDMD 404


>ref|XP_002512601.1| conserved hypothetical protein [Ricinus communis]
            gi|223548562|gb|EEF50053.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 420

 Score =  593 bits (1528), Expect = e-167
 Identities = 295/402 (73%), Positives = 327/402 (81%), Gaps = 1/402 (0%)
 Frame = -3

Query: 1559 MAPIYFIIIAFPCVVGAIVLAVVHIYRHLMNYTEPTYQRFIVRIIFMVPVYALMSFLSLL 1380
            + P+Y+ IIAF C  GAI LAV HIYRHL+NYTEPTYQR+IVRIIFMVPVYA MSFLSL+
Sbjct: 4    VVPLYYSIIAFICTFGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYASMSFLSLV 63

Query: 1379 LNESSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLTLSGRVLKPSWCLMTCCFSPI 1200
            L  S+IYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVL+LSGR+LKPS CLMTCC  PI
Sbjct: 64   LPASAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRILKPSCCLMTCCLPPI 123

Query: 1199 PLDGRFIRRCKQGALQFVILKPILVALTFILYAKGKYEDGNFSAKQGXXXXXXXXXXXXX 1020
            PLDGRFIRRCKQG LQFVILKPILVA+T +LYAKGKY+DGNFS  Q              
Sbjct: 124  PLDGRFIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFSPNQAYLYLTIIYTISYT 183

Query: 1019 XXXXXXXXXXXACKDLLRPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSGFIKNTGEAAE 840
                       AC+DLL+PFNPVPKF+IIKSVVFLTYWQGVLVFLAAKSGFIK+  EAA+
Sbjct: 184  MALYALALFYVACRDLLQPFNPVPKFVIIKSVVFLTYWQGVLVFLAAKSGFIKDAEEAAQ 243

Query: 839  FQNFIVCVEMLIAAVGHLYAFPYKEYAGANIGASGGLTGSLGHALKFNDFYHDTVHQFAP 660
            FQNFI+CVEMLIAAVGHL+AFPYKEYAGANIG S GLTGSL HALK NDFYHDTVHQFAP
Sbjct: 244  FQNFIICVEMLIAAVGHLFAFPYKEYAGANIGGSYGLTGSLAHALKLNDFYHDTVHQFAP 303

Query: 659  TYHDYVLYNHNEGDDGTRKYRSRTFVPTGQEMDTVRKNKLVIGTRIDEIQL-XXXXXXXX 483
            TYHDYVLYNH+EGD+GTRKYRSRTFVPTGQEMD +R+NK + G ++DEIQL         
Sbjct: 304  TYHDYVLYNHSEGDEGTRKYRSRTFVPTGQEMDAIRRNKHMFGNKLDEIQLSSHSSSGTS 363

Query: 482  XXXXXXTAQDYIDPEAMKSSLLMDYSNSFAQPYDVSLVDMDL 357
                  +A D +  + MKSSLL+D SNSF  PYD+SL+DMDL
Sbjct: 364  TPKNIVSAPDSVQRDTMKSSLLVDASNSFT-PYDMSLIDMDL 404


>ref|XP_004144735.1| PREDICTED: transmembrane protein 184B-like [Cucumis sativus]
          Length = 420

 Score =  591 bits (1523), Expect = e-166
 Identities = 289/401 (72%), Positives = 326/401 (81%)
 Frame = -3

Query: 1559 MAPIYFIIIAFPCVVGAIVLAVVHIYRHLMNYTEPTYQRFIVRIIFMVPVYALMSFLSLL 1380
            + PIY+ IIAF C  GAI LA+ HIYRHL+NYTEPTYQR+IVRIIFMVPVYALMSFLSL+
Sbjct: 4    VVPIYYSIIAFFCTAGAIALAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLV 63

Query: 1379 LNESSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLTLSGRVLKPSWCLMTCCFSPI 1200
            L  SSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVV++LSGRVLKPS CLMTCC  P+
Sbjct: 64   LPSSSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVISLSGRVLKPSCCLMTCCLPPL 123

Query: 1199 PLDGRFIRRCKQGALQFVILKPILVALTFILYAKGKYEDGNFSAKQGXXXXXXXXXXXXX 1020
             LDGRFIRRCKQG LQFVILKPILVA+T ILYAKGKYEDGNF+ KQ              
Sbjct: 124  ALDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLTIIYTISYT 183

Query: 1019 XXXXXXXXXXXACKDLLRPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSGFIKNTGEAAE 840
                       ACKDLL+PFNPVPKFIIIKSVVFLTYWQGVLVFLAAK+ FIKN  +AA+
Sbjct: 184  MALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQFIKNAEQAAQ 243

Query: 839  FQNFIVCVEMLIAAVGHLYAFPYKEYAGANIGASGGLTGSLGHALKFNDFYHDTVHQFAP 660
            FQ+FI+C+EMLIAA+GHLYAFPYKEYAGANIG S GLTGSL HA+K NDFYHDTVHQFAP
Sbjct: 244  FQDFIICIEMLIAALGHLYAFPYKEYAGANIGGSRGLTGSLAHAVKLNDFYHDTVHQFAP 303

Query: 659  TYHDYVLYNHNEGDDGTRKYRSRTFVPTGQEMDTVRKNKLVIGTRIDEIQLXXXXXXXXX 480
            TYHDYVLYNH++GD+GTRKYRSRTFVPTG EMDTVR+NK + G ++D+IQL         
Sbjct: 304  TYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFGNKLDDIQLSTISSSSSS 363

Query: 479  XXXXXTAQDYIDPEAMKSSLLMDYSNSFAQPYDVSLVDMDL 357
                    +  + +AMKSSLL+D SNS + PYD+SL+D+D+
Sbjct: 364  TPNHPEVLEPTNSDAMKSSLLLDASNSLSTPYDMSLIDLDM 404


>ref|XP_003626112.1| Transmembrane protein 184A [Medicago truncatula]
            gi|87240996|gb|ABD32854.1| Protein of unknown function
            [Medicago truncatula] gi|355501127|gb|AES82330.1|
            Transmembrane protein 184A [Medicago truncatula]
          Length = 420

 Score =  582 bits (1501), Expect = e-164
 Identities = 285/402 (70%), Positives = 324/402 (80%)
 Frame = -3

Query: 1562 LMAPIYFIIIAFPCVVGAIVLAVVHIYRHLMNYTEPTYQRFIVRIIFMVPVYALMSFLSL 1383
            ++ P++F +IAF C VGAI LA++HIYRHL+NYTEPTYQRFIVRI+FMVPVYALMSFLSL
Sbjct: 3    VLLPLFFYVIAFFCTVGAIALAILHIYRHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSL 62

Query: 1382 LLNESSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLTLSGRVLKPSWCLMTCCFSP 1203
            +L   SIYFNSIREVYEAWVIYNFLSLCLAWVGGPG+VV++LSGRVLKPS CLMTCCF P
Sbjct: 63   VLPRLSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGSVVISLSGRVLKPSVCLMTCCFPP 122

Query: 1202 IPLDGRFIRRCKQGALQFVILKPILVALTFILYAKGKYEDGNFSAKQGXXXXXXXXXXXX 1023
            IPLDGRFIR+CKQG LQFVILKPILV +T ILYAKGKY+DGNF+ KQ             
Sbjct: 123  IPLDGRFIRKCKQGCLQFVILKPILVVVTLILYAKGKYKDGNFNPKQSYLYLTIIYTFSY 182

Query: 1022 XXXXXXXXXXXXACKDLLRPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSGFIKNTGEAA 843
                        ACKDLL+PFNPVPKFIIIKSVVFLTYWQGVL FLAAKSGFI++  EAA
Sbjct: 183  TMALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLFFLAAKSGFIQDADEAA 242

Query: 842  EFQNFIVCVEMLIAAVGHLYAFPYKEYAGANIGASGGLTGSLGHALKFNDFYHDTVHQFA 663
              QNFI+CVEMLIAAVGH YAFPYKEYAGANIG S GLT SLGHALK NDFYHDTVHQFA
Sbjct: 243  LLQNFIICVEMLIAAVGHFYAFPYKEYAGANIGGSRGLTASLGHALKLNDFYHDTVHQFA 302

Query: 662  PTYHDYVLYNHNEGDDGTRKYRSRTFVPTGQEMDTVRKNKLVIGTRIDEIQLXXXXXXXX 483
            PTYHDYVLYNH+EG++GTRKYRSRTFVP G EMD VRKNK + G ++D+IQL        
Sbjct: 303  PTYHDYVLYNHSEGEEGTRKYRSRTFVPIGPEMDNVRKNKHITGNKVDDIQLTSFSSDSS 362

Query: 482  XXXXXXTAQDYIDPEAMKSSLLMDYSNSFAQPYDVSLVDMDL 357
                  +  D  + +A+KSSLL+D S S + PYD++L+D+D+
Sbjct: 363  TPSNSGSLPDASNSDAIKSSLLVDVSTSASIPYDLTLIDLDV 404


>ref|XP_003521636.1| PREDICTED: transmembrane protein 184A-like [Glycine max]
          Length = 421

 Score =  578 bits (1489), Expect = e-162
 Identities = 281/402 (69%), Positives = 326/402 (81%), Gaps = 1/402 (0%)
 Frame = -3

Query: 1559 MAPIYFIIIAFPCVVGAIVLAVVHIYRHLMNYTEPTYQRFIVRIIFMVPVYALMSFLSLL 1380
            + P++F I+AF C + AI LAV+HIYRHL+NYTEPTYQR+IVRIIFMVPVYALMSFLSL+
Sbjct: 4    LVPLFFHIVAFICTIAAIALAVLHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLV 63

Query: 1379 LNESSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLTLSGRVLKPSWCLMTCCFSPI 1200
            + +SSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVV++LSGRVLKPS+CLMTCCF PI
Sbjct: 64   IPDSSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVISLSGRVLKPSFCLMTCCFPPI 123

Query: 1199 PLDGRFIRRCKQGALQFVILKPILVALTFILYAKGKYEDGNFSAKQGXXXXXXXXXXXXX 1020
            PLDGRFIR+CKQG LQFVILKPILV +T ILYAKGKY+DGNF+ KQ              
Sbjct: 124  PLDGRFIRKCKQGCLQFVILKPILVVVTLILYAKGKYKDGNFNPKQSYLYLTIIYMISYT 183

Query: 1019 XXXXXXXXXXXACKDLLRPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSGFIKNTGEAAE 840
                       ACKDLL+PFNPVPKFIIIKSVVFLTYWQGVL FLAAKSGFI++  EAA 
Sbjct: 184  MALYVLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLFFLAAKSGFIEDADEAAL 243

Query: 839  FQNFIVCVEMLIAAVGHLYAFPYKEYAGANIGASGGLTGSLGHALKFNDFYHDTVHQFAP 660
             QNFI+CVEML+AAVGH YAFPYKEYAGANIG S GLT SLGHALK NDFYHDTVHQFAP
Sbjct: 244  LQNFIICVEMLVAAVGHFYAFPYKEYAGANIGGSRGLTASLGHALKLNDFYHDTVHQFAP 303

Query: 659  TYHDYVLYNHNEGDDGTRKYRSRTFVPTGQEMDTVRKNKLVIGTRIDEIQLXXXXXXXXX 480
            TYH+YVLYNH+EG++GT+KYRSRTFVP G EMD+VR+NK + G ++D+IQL         
Sbjct: 304  TYHEYVLYNHSEGEEGTKKYRSRTFVPIGPEMDSVRRNKHMFGNKLDDIQLSSLSYSTSS 363

Query: 479  XXXXXTAQ-DYIDPEAMKSSLLMDYSNSFAQPYDVSLVDMDL 357
                  +  D  + +A  SSLL+D SNS ++PYD++L+D+D+
Sbjct: 364  TPSNSGSMPDASNSDATNSSLLVDMSNSVSEPYDLTLIDLDV 405


Top