BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011502
         (1366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16563.3| unnamed protein product [Vitis vinifera]              375   e-101
ref|XP_002525448.1| TATA-box binding protein, putative [Ricinus ...   375   e-101
gb|AFW68090.1| TATA-binding protein2, partial [Zea mays]              373   e-101
ref|NP_001105319.1| TATA-box-binding protein 2 [Zea mays] gi|172...   373   e-101
ref|XP_003534647.1| PREDICTED: TATA-box-binding protein-like [Gl...   372   e-101

>emb|CBI16563.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  375 bits (964), Expect = e-101
 Identities = 195/223 (87%), Positives = 201/223 (90%), Gaps = 3/223 (1%)
 Frame = -2

Query: 1071 EGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLNLKQIALQARNAEYNPKRFAAVIMRIRE 892
            EGSQPVDLSKHPSGI+PTLQNIVSTVNLDCKL+LK IALQARNAEYNPKRFAAVIMRIR+
Sbjct: 7    EGSQPVDLSKHPSGIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIRD 66

Query: 891  PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKF 712
            PKTTALIFASGKMVCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKF
Sbjct: 67   PKTTALIFASGKMVCTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKF 126

Query: 711  PIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYAAFE 532
            PIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETY AFE
Sbjct: 127  PIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFE 186

Query: 531  NIYPVLSEFRKTQQ*YLFDIAYCFLLMLKAKTSW---LCYCVT 412
            NIYPVL+EFRK QQ Y     +C  L   + T W   L Y VT
Sbjct: 187  NIYPVLTEFRKNQQCYR-SWVFCSFLFEFSTTKWRFRLLYVVT 228


>ref|XP_002525448.1| TATA-box binding protein, putative [Ricinus communis]
            gi|223535261|gb|EEF36938.1| TATA-box binding protein,
            putative [Ricinus communis]
          Length = 201

 Score =  375 bits (963), Expect = e-101
 Identities = 189/194 (97%), Positives = 192/194 (98%)
 Frame = -2

Query: 1071 EGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLNLKQIALQARNAEYNPKRFAAVIMRIRE 892
            EGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKL+LKQIALQARNAEYNPKRFAAVIMRIRE
Sbjct: 8    EGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKQIALQARNAEYNPKRFAAVIMRIRE 67

Query: 891  PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKF 712
            PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKF
Sbjct: 68   PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKF 127

Query: 711  PIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYAAFE 532
            PIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETY AFE
Sbjct: 128  PIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFE 187

Query: 531  NIYPVLSEFRKTQQ 490
            NIYPVL+EFRK QQ
Sbjct: 188  NIYPVLTEFRKVQQ 201


>gb|AFW68090.1| TATA-binding protein2, partial [Zea mays]
          Length = 205

 Score =  373 bits (958), Expect = e-101
 Identities = 192/204 (94%), Positives = 195/204 (95%)
 Frame = -2

Query: 1101 MADPXXXXVGEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLNLKQIALQARNAEYNPKR 922
            MA+P      EGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKL+LK IALQARNAEYNPKR
Sbjct: 1    MAEPGL----EGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR 56

Query: 921  FAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQ 742
            FAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQ
Sbjct: 57   FAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQ 116

Query: 741  NIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 562
            NIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
Sbjct: 117  NIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 176

Query: 561  VRDETYAAFENIYPVLSEFRKTQQ 490
            VR+ETY AFENIYPVLSEFRK QQ
Sbjct: 177  VREETYTAFENIYPVLSEFRKIQQ 200


>ref|NP_001105319.1| TATA-box-binding protein 2 [Zea mays]
            gi|1729908|sp|P50159.1|TBP2_MAIZE RecName:
            Full=TATA-box-binding protein 2; AltName: Full=TATA
            sequence-binding protein 2; Short=TBP-2; AltName:
            Full=TATA-binding factor 2; AltName: Full=TATA-box factor
            2; AltName: Full=Transcription initiation factor TFIID
            TBP-2 subunit gi|293906|gb|AAA65942.1| TATA-binding
            protein [Zea mays] gi|195604414|gb|ACG24037.1|
            TATA-binding protein 2 [Zea mays]
            gi|238014342|gb|ACR38206.1| unknown [Zea mays]
            gi|413933540|gb|AFW68091.1| TATA-binding protein2 [Zea
            mays]
          Length = 200

 Score =  373 bits (958), Expect = e-101
 Identities = 192/204 (94%), Positives = 195/204 (95%)
 Frame = -2

Query: 1101 MADPXXXXVGEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLNLKQIALQARNAEYNPKR 922
            MA+P      EGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKL+LK IALQARNAEYNPKR
Sbjct: 1    MAEPGL----EGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR 56

Query: 921  FAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQ 742
            FAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQ
Sbjct: 57   FAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQ 116

Query: 741  NIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 562
            NIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK
Sbjct: 117  NIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 176

Query: 561  VRDETYAAFENIYPVLSEFRKTQQ 490
            VR+ETY AFENIYPVLSEFRK QQ
Sbjct: 177  VREETYTAFENIYPVLSEFRKIQQ 200


>ref|XP_003534647.1| PREDICTED: TATA-box-binding protein-like [Glycine max]
          Length = 200

 Score =  372 bits (956), Expect = e-101
 Identities = 188/194 (96%), Positives = 190/194 (97%)
 Frame = -2

Query: 1071 EGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLNLKQIALQARNAEYNPKRFAAVIMRIRE 892
            EGSQPVDL+KHPSGIVPTLQNIVSTVNLDCKL LK IALQARNAEYNPKRFAAVIMRIRE
Sbjct: 7    EGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIRE 66

Query: 891  PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKF 712
            PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKF
Sbjct: 67   PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKF 126

Query: 711  PIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYAAFE 532
            PIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETY AFE
Sbjct: 127  PIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFE 186

Query: 531  NIYPVLSEFRKTQQ 490
            NIYPVL+EFRK QQ
Sbjct: 187  NIYPVLTEFRKNQQ 200