BLASTX nr result
ID: Coptis23_contig00010992
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00010992 (424 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003554306.1| PREDICTED: WD repeat-containing protein 70-l... 98 1e-37 ref|XP_002320613.1| predicted protein [Populus trichocarpa] gi|2... 92 2e-36 emb|CBI37203.3| unnamed protein product [Vitis vinifera] 92 2e-36 ref|XP_002269414.2| PREDICTED: WD repeat-containing protein 70-l... 92 2e-36 ref|XP_003625415.1| WD repeat-containing protein [Medicago trunc... 93 5e-36 >ref|XP_003554306.1| PREDICTED: WD repeat-containing protein 70-like [Glycine max] Length = 614 Score = 97.8 bits (242), Expect(2) = 1e-37 Identities = 46/50 (92%), Positives = 49/50 (98%) Frame = +2 Query: 272 MIKETWLYEDPREAILKHADAAAKDPKFIAPAYAETQPEPVFAKSDSEEE 421 MIKETW+ EDPREAILK+ADAAAKDPKFIAPAYAETQPEPVFAKSDSE+E Sbjct: 563 MIKETWMEEDPREAILKYADAAAKDPKFIAPAYAETQPEPVFAKSDSEDE 612 Score = 84.0 bits (206), Expect(2) = 1e-37 Identities = 37/45 (82%), Positives = 43/45 (95%) Frame = +3 Query: 129 KREKALKDPLKSHKPKLPMTGPGFGGRVGSTSGSILTQYLLKQGG 263 +REK LKDPLKSHKP+LPMTGPGFGGRVG++ GS+LTQYLLK+GG Sbjct: 518 QREKVLKDPLKSHKPELPMTGPGFGGRVGTSQGSLLTQYLLKKGG 562 >ref|XP_002320613.1| predicted protein [Populus trichocarpa] gi|222861386|gb|EEE98928.1| predicted protein [Populus trichocarpa] Length = 647 Score = 92.4 bits (228), Expect(2) = 2e-36 Identities = 42/50 (84%), Positives = 48/50 (96%) Frame = +2 Query: 272 MIKETWLYEDPREAILKHADAAAKDPKFIAPAYAETQPEPVFAKSDSEEE 421 MIKETW+ EDPREAILK+ADAA KDPK+IAPAYA+TQP+PVFAKSDSE+E Sbjct: 596 MIKETWMEEDPREAILKYADAAEKDPKYIAPAYAQTQPDPVFAKSDSEDE 645 Score = 85.5 bits (210), Expect(2) = 2e-36 Identities = 38/45 (84%), Positives = 43/45 (95%) Frame = +3 Query: 129 KREKALKDPLKSHKPKLPMTGPGFGGRVGSTSGSILTQYLLKQGG 263 +REK LKDPLKSHKP+LPMTGPGFGGRVG++ GS+LTQYLLKQGG Sbjct: 551 QREKTLKDPLKSHKPELPMTGPGFGGRVGASKGSLLTQYLLKQGG 595 >emb|CBI37203.3| unnamed protein product [Vitis vinifera] Length = 665 Score = 92.0 bits (227), Expect(2) = 2e-36 Identities = 42/50 (84%), Positives = 47/50 (94%) Frame = +2 Query: 272 MIKETWLYEDPREAILKHADAAAKDPKFIAPAYAETQPEPVFAKSDSEEE 421 +IKETW+ EDPREAILK+AD AA DPKFIAPAYA+TQPEPVFAKSDSE+E Sbjct: 614 LIKETWMEEDPREAILKYADVAANDPKFIAPAYAQTQPEPVFAKSDSEDE 663 Score = 85.5 bits (210), Expect(2) = 2e-36 Identities = 38/45 (84%), Positives = 43/45 (95%) Frame = +3 Query: 129 KREKALKDPLKSHKPKLPMTGPGFGGRVGSTSGSILTQYLLKQGG 263 +REK LKDP+KSHKP+LP+TGPGFGGRVGST GS+LTQYLLKQGG Sbjct: 569 QREKILKDPIKSHKPELPITGPGFGGRVGSTKGSLLTQYLLKQGG 613 >ref|XP_002269414.2| PREDICTED: WD repeat-containing protein 70-like [Vitis vinifera] Length = 658 Score = 92.0 bits (227), Expect(2) = 2e-36 Identities = 42/50 (84%), Positives = 47/50 (94%) Frame = +2 Query: 272 MIKETWLYEDPREAILKHADAAAKDPKFIAPAYAETQPEPVFAKSDSEEE 421 +IKETW+ EDPREAILK+AD AA DPKFIAPAYA+TQPEPVFAKSDSE+E Sbjct: 607 LIKETWMEEDPREAILKYADVAANDPKFIAPAYAQTQPEPVFAKSDSEDE 656 Score = 85.5 bits (210), Expect(2) = 2e-36 Identities = 38/45 (84%), Positives = 43/45 (95%) Frame = +3 Query: 129 KREKALKDPLKSHKPKLPMTGPGFGGRVGSTSGSILTQYLLKQGG 263 +REK LKDP+KSHKP+LP+TGPGFGGRVGST GS+LTQYLLKQGG Sbjct: 562 QREKILKDPIKSHKPELPITGPGFGGRVGSTKGSLLTQYLLKQGG 606 >ref|XP_003625415.1| WD repeat-containing protein [Medicago truncatula] gi|355500430|gb|AES81633.1| WD repeat-containing protein [Medicago truncatula] Length = 611 Score = 93.2 bits (230), Expect(2) = 5e-36 Identities = 43/50 (86%), Positives = 48/50 (96%) Frame = +2 Query: 272 MIKETWLYEDPREAILKHADAAAKDPKFIAPAYAETQPEPVFAKSDSEEE 421 MIKETW+ EDPREAILK+AD AAK+PKFIAPAYAETQPEP+FAKSDSE+E Sbjct: 560 MIKETWMDEDPREAILKYADVAAKEPKFIAPAYAETQPEPLFAKSDSEDE 609 Score = 83.2 bits (204), Expect(2) = 5e-36 Identities = 36/45 (80%), Positives = 43/45 (95%) Frame = +3 Query: 129 KREKALKDPLKSHKPKLPMTGPGFGGRVGSTSGSILTQYLLKQGG 263 +REK LKDPLKSHKP++PMTGPGFGGRVG++ GS+LTQYLLK+GG Sbjct: 515 QREKVLKDPLKSHKPEMPMTGPGFGGRVGTSQGSLLTQYLLKKGG 559