BLASTX nr result

ID: Coptis23_contig00010992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010992
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554306.1| PREDICTED: WD repeat-containing protein 70-l...    98   1e-37
ref|XP_002320613.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-36
emb|CBI37203.3| unnamed protein product [Vitis vinifera]               92   2e-36
ref|XP_002269414.2| PREDICTED: WD repeat-containing protein 70-l...    92   2e-36
ref|XP_003625415.1| WD repeat-containing protein [Medicago trunc...    93   5e-36

>ref|XP_003554306.1| PREDICTED: WD repeat-containing protein 70-like [Glycine max]
          Length = 614

 Score = 97.8 bits (242), Expect(2) = 1e-37
 Identities = 46/50 (92%), Positives = 49/50 (98%)
 Frame = +2

Query: 272 MIKETWLYEDPREAILKHADAAAKDPKFIAPAYAETQPEPVFAKSDSEEE 421
           MIKETW+ EDPREAILK+ADAAAKDPKFIAPAYAETQPEPVFAKSDSE+E
Sbjct: 563 MIKETWMEEDPREAILKYADAAAKDPKFIAPAYAETQPEPVFAKSDSEDE 612



 Score = 84.0 bits (206), Expect(2) = 1e-37
 Identities = 37/45 (82%), Positives = 43/45 (95%)
 Frame = +3

Query: 129 KREKALKDPLKSHKPKLPMTGPGFGGRVGSTSGSILTQYLLKQGG 263
           +REK LKDPLKSHKP+LPMTGPGFGGRVG++ GS+LTQYLLK+GG
Sbjct: 518 QREKVLKDPLKSHKPELPMTGPGFGGRVGTSQGSLLTQYLLKKGG 562


>ref|XP_002320613.1| predicted protein [Populus trichocarpa] gi|222861386|gb|EEE98928.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score = 92.4 bits (228), Expect(2) = 2e-36
 Identities = 42/50 (84%), Positives = 48/50 (96%)
 Frame = +2

Query: 272 MIKETWLYEDPREAILKHADAAAKDPKFIAPAYAETQPEPVFAKSDSEEE 421
           MIKETW+ EDPREAILK+ADAA KDPK+IAPAYA+TQP+PVFAKSDSE+E
Sbjct: 596 MIKETWMEEDPREAILKYADAAEKDPKYIAPAYAQTQPDPVFAKSDSEDE 645



 Score = 85.5 bits (210), Expect(2) = 2e-36
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = +3

Query: 129 KREKALKDPLKSHKPKLPMTGPGFGGRVGSTSGSILTQYLLKQGG 263
           +REK LKDPLKSHKP+LPMTGPGFGGRVG++ GS+LTQYLLKQGG
Sbjct: 551 QREKTLKDPLKSHKPELPMTGPGFGGRVGASKGSLLTQYLLKQGG 595


>emb|CBI37203.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score = 92.0 bits (227), Expect(2) = 2e-36
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = +2

Query: 272 MIKETWLYEDPREAILKHADAAAKDPKFIAPAYAETQPEPVFAKSDSEEE 421
           +IKETW+ EDPREAILK+AD AA DPKFIAPAYA+TQPEPVFAKSDSE+E
Sbjct: 614 LIKETWMEEDPREAILKYADVAANDPKFIAPAYAQTQPEPVFAKSDSEDE 663



 Score = 85.5 bits (210), Expect(2) = 2e-36
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = +3

Query: 129 KREKALKDPLKSHKPKLPMTGPGFGGRVGSTSGSILTQYLLKQGG 263
           +REK LKDP+KSHKP+LP+TGPGFGGRVGST GS+LTQYLLKQGG
Sbjct: 569 QREKILKDPIKSHKPELPITGPGFGGRVGSTKGSLLTQYLLKQGG 613


>ref|XP_002269414.2| PREDICTED: WD repeat-containing protein 70-like [Vitis vinifera]
          Length = 658

 Score = 92.0 bits (227), Expect(2) = 2e-36
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = +2

Query: 272 MIKETWLYEDPREAILKHADAAAKDPKFIAPAYAETQPEPVFAKSDSEEE 421
           +IKETW+ EDPREAILK+AD AA DPKFIAPAYA+TQPEPVFAKSDSE+E
Sbjct: 607 LIKETWMEEDPREAILKYADVAANDPKFIAPAYAQTQPEPVFAKSDSEDE 656



 Score = 85.5 bits (210), Expect(2) = 2e-36
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = +3

Query: 129 KREKALKDPLKSHKPKLPMTGPGFGGRVGSTSGSILTQYLLKQGG 263
           +REK LKDP+KSHKP+LP+TGPGFGGRVGST GS+LTQYLLKQGG
Sbjct: 562 QREKILKDPIKSHKPELPITGPGFGGRVGSTKGSLLTQYLLKQGG 606


>ref|XP_003625415.1| WD repeat-containing protein [Medicago truncatula]
           gi|355500430|gb|AES81633.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 611

 Score = 93.2 bits (230), Expect(2) = 5e-36
 Identities = 43/50 (86%), Positives = 48/50 (96%)
 Frame = +2

Query: 272 MIKETWLYEDPREAILKHADAAAKDPKFIAPAYAETQPEPVFAKSDSEEE 421
           MIKETW+ EDPREAILK+AD AAK+PKFIAPAYAETQPEP+FAKSDSE+E
Sbjct: 560 MIKETWMDEDPREAILKYADVAAKEPKFIAPAYAETQPEPLFAKSDSEDE 609



 Score = 83.2 bits (204), Expect(2) = 5e-36
 Identities = 36/45 (80%), Positives = 43/45 (95%)
 Frame = +3

Query: 129 KREKALKDPLKSHKPKLPMTGPGFGGRVGSTSGSILTQYLLKQGG 263
           +REK LKDPLKSHKP++PMTGPGFGGRVG++ GS+LTQYLLK+GG
Sbjct: 515 QREKVLKDPLKSHKPEMPMTGPGFGGRVGTSQGSLLTQYLLKKGG 559


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