BLASTX nr result

ID: Coptis23_contig00010981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010981
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310885.1| predicted protein [Populus trichocarpa] gi|2...   108   1e-21
ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|2...   106   6e-21
emb|CBI19366.3| unnamed protein product [Vitis vinifera]              106   8e-21
ref|XP_002510054.1| conserved hypothetical protein [Ricinus comm...    87   5e-15
ref|XP_003608560.1| hypothetical protein MTR_4g097480 [Medicago ...    84   5e-14

>ref|XP_002310885.1| predicted protein [Populus trichocarpa] gi|222853788|gb|EEE91335.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  108 bits (271), Expect = 1e-21
 Identities = 70/159 (44%), Positives = 93/159 (58%), Gaps = 11/159 (6%)
 Frame = -1

Query: 766 MNPSKVHSQGSIPFSWENQPGISKV---KYSSDVGTCAL-IKLPLPPC----QSDVSSPK 611
           M+  KV+SQGSIPFSWE+ PG+SKV   +Y+ D+G  A+ I  P  P      SD S   
Sbjct: 1   MSHRKVYSQGSIPFSWEDSPGVSKVIHKEYTIDIGLNAVNISSPTSPILFPRDSDTSYKV 60

Query: 610 ILGHDIQVXXXXXXXXXP---LRSSSRKGLRRQDDDPFLAAYKECTKSVKQSKLSTYSKK 440
           +  H I++              RS S KG R   +DPFLAAYKECTK+ +  KLS+ SKK
Sbjct: 61  LGSHGIKIPLPPCVSAKIEPPRRSKSVKGFRWWQEDPFLAAYKECTKNGRNGKLSSESKK 120

Query: 439 IGASREGRIGSLFSCKYSCGVREDGMVKLSRLSPPIPRE 323
              S+  +   +FSCK SC V++D +V L+ L P IPR+
Sbjct: 121 NVRSKLRKSRLIFSCKDSCDVQDDNLVMLANL-PAIPRD 158


>ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|222860791|gb|EEE98333.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  106 bits (265), Expect = 6e-21
 Identities = 70/158 (44%), Positives = 91/158 (57%), Gaps = 7/158 (4%)
 Frame = -1

Query: 766 MNPSKVHSQGSIPFSWENQPGISKVKYSSDV--GTCALIKLPLPPCQSDVSSPKILGHDI 593
           M  SK+HS+G++PFSWE +PG SKV    D      +++KL  PPC   V S +I  HDI
Sbjct: 1   MKQSKIHSKGNVPFSWEKKPGESKVTSHHDYLSRETSVVKLQPPPC--PVESSRISTHDI 58

Query: 592 QV---XXXXXXXXXPLRSSSRKGLRRQ-DDDPFLAAYKECTKSVKQSKLSTYSKKIGASR 425
            +            PLRSSSR+GL++  DDDPFLAAYKECTK  K        K  G+ R
Sbjct: 59  IIPLPPCTFQAPGAPLRSSSRRGLKKDIDDDPFLAAYKECTKKDK-----PVGKDFGSGR 113

Query: 424 EGR-IGSLFSCKYSCGVREDGMVKLSRLSPPIPRETDK 314
             R I    SCK SC VR+D +V++S+    +P E +K
Sbjct: 114 RKRAIFDFSSCKQSCSVRDDNLVRVSQ----VPYEREK 147


>emb|CBI19366.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  106 bits (264), Expect = 8e-21
 Identities = 64/154 (41%), Positives = 89/154 (57%), Gaps = 7/154 (4%)
 Frame = -1

Query: 766 MNPSKVHSQGSIPFSWENQPGISKVKYS-----SDVGTCALIKLPLPPCQSDVSSPKILG 602
           MN SK+HSQG++PF+WEN+PG+ K +       +D G   +IKL  PPC  +   P + G
Sbjct: 1   MNQSKIHSQGNVPFAWENKPGVCKARRDDEDCPTDTGH-FVIKLQPPPCPLEKGRPSVHG 59

Query: 601 HDIQVXXXXXXXXXPLRSSSRKGLRRQDDDPFLAAYKECTKSVKQSKLSTYSKKIGASRE 422
             I +           R+SS+KG  R+ +DPFLAAYKECTK+ ++          G +  
Sbjct: 60  SQIPLPPCTFQGPPS-RNSSKKGHLRKQEDPFLAAYKECTKNTRKG-------HDGKTHL 111

Query: 421 GRIGSLF--SCKYSCGVREDGMVKLSRLSPPIPR 326
           GR  S+F  SCK+SC VR+D +V  SRLS  + R
Sbjct: 112 GR-SSMFNLSCKHSCNVRDDNLVSKSRLSALVSR 144


>ref|XP_002510054.1| conserved hypothetical protein [Ricinus communis]
           gi|223550755|gb|EEF52241.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
 Frame = -1

Query: 766 MNPSKVHSQGSIPFSWENQPGISK-VKYSSDVG--TCALIKLPLPPCQSDVSSPKILGHD 596
           M+ SK +++G++PFSWE +PG+SK +   SD       ++KL  PPC   + SP+I  HD
Sbjct: 1   MDQSKANTKGNVPFSWEKKPGVSKLINQDSDPNQEEDLVLKLLPPPC--PIESPRISTHD 58

Query: 595 -IQVXXXXXXXXXPLRSSSRKGLRRQDDDPFLAAYKECTKSV-KQSKLSTYSKKIGASRE 422
            I +         P RSSSRKG+R+Q DDPFLAAYKECTKS  K  KLS  +      R+
Sbjct: 59  TINIPLPPCTFQPPSRSSSRKGIRKQ-DDPFLAAYKECTKSTEKGDKLSRNNAARSGLRK 117

Query: 421 GR 416
           G+
Sbjct: 118 GQ 119


>ref|XP_003608560.1| hypothetical protein MTR_4g097480 [Medicago truncatula]
           gi|355509615|gb|AES90757.1| hypothetical protein
           MTR_4g097480 [Medicago truncatula]
          Length = 175

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 61/160 (38%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
 Frame = -1

Query: 766 MNPSKVHSQGSIPFSWENQPGISKVKYS----SDVGTCALIKLPLPPCQSDVSSPKIL-- 605
           M+  K HS GSIPFSWE++PGI K   +    + +   +  KL  P    ++S   IL  
Sbjct: 1   MSHRKSHSYGSIPFSWEDKPGICKTPNNECPLNSINKKSSSKLS-PSHFDNISKKNILEF 59

Query: 604 -GHDIQVXXXXXXXXXPLRSSSRKGLRRQDDDPFLAAYKECTKSVKQSKLSTYSKK-IGA 431
               I +         P RS+S KG + Q +DPFL AYKECTKS K  K+ + +KK +G 
Sbjct: 60  QDKKISIPLPPCQTQPPQRSTSGKGFKLQ-EDPFLVAYKECTKSDKNCKMQSKNKKGVGF 118

Query: 430 SREG-RIGSLFSCKYSCGVREDGMVKLSRLSPPIPRETDK 314
           +    R  S+FSC+ +  V++D  +KLS+L P +P   D+
Sbjct: 119 NFVSLRSYSIFSCRSAIDVKDDSYIKLSKL-PRLPAHRDR 157


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