BLASTX nr result

ID: Coptis23_contig00010980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010980
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276483.1| PREDICTED: uncharacterized protein LOC100243...   221   1e-55
ref|XP_003608075.1| hypothetical protein MTR_4g087380 [Medicago ...   210   4e-52
emb|CAN69676.1| hypothetical protein VITISV_027733 [Vitis vinifera]   209   6e-52
ref|XP_003520180.1| PREDICTED: uncharacterized protein LOC100813...   208   1e-51
ref|XP_002531891.1| conserved hypothetical protein [Ricinus comm...   207   2e-51

>ref|XP_002276483.1| PREDICTED: uncharacterized protein LOC100243911 [Vitis vinifera]
          Length = 201

 Score =  221 bits (564), Expect = 1e-55
 Identities = 117/201 (58%), Positives = 142/201 (70%), Gaps = 34/201 (16%)
 Frame = -1

Query: 648 MQDPKKSHRRKSWYQRAMEIATLWKSLLKPIELPTRS----------------------- 538
           MQDPK  + RK WYQRAME+ATLWK++ K  E+PT +                       
Sbjct: 1   MQDPKNPNTRKPWYQRAMEMATLWKTISKSTEIPTANTTLWKTISKSAAIRTTTTTTTTT 60

Query: 537 ---NKPRLKKSTSLSVATSFTRVCLCAPISSYNEVFQADVPPRRSNSYPRTKSLMVPSKR 367
              ++ +L+K TSL VATSFTRVCLCAPISSY EVF+A++PPRRSNSYPR+K    P +R
Sbjct: 61  TNPHRQKLRKCTSLRVATSFTRVCLCAPISSYTEVFRAELPPRRSNSYPRSKPFPSPQER 120

Query: 366 FTNVRINTENN--------KVFRGKSLNDDVLMRRFVVEEKAMMHFRRRNQIEVIRKRST 211
            +N RI+ E +        +VFRGKSL DDVLMRRFVVEE+AM+  RRRNQ+EVIR+RS 
Sbjct: 121 ISNARISMEGSARVSAEGRRVFRGKSLTDDVLMRRFVVEEEAMIQVRRRNQMEVIRRRSA 180

Query: 210 MRRKKLGPSPLSRVVMAEDEE 148
           MRRKKLGPSPLSR+VMAE+EE
Sbjct: 181 MRRKKLGPSPLSRMVMAEEEE 201


>ref|XP_003608075.1| hypothetical protein MTR_4g087380 [Medicago truncatula]
           gi|355509130|gb|AES90272.1| hypothetical protein
           MTR_4g087380 [Medicago truncatula]
          Length = 238

 Score =  210 bits (534), Expect = 4e-52
 Identities = 116/198 (58%), Positives = 145/198 (73%), Gaps = 26/198 (13%)
 Frame = -1

Query: 669 YSQFFLFMQDPKK-SHRRKSWYQRAMEI------------------ATLWKSLLKPIELP 547
           Y QF LFMQDPK  S+ RK WYQRAM++                  +TLWK++ K  ++P
Sbjct: 37  YFQFSLFMQDPKNDSNTRKPWYQRAMDVTSLWRIIPKSTNISTSNNSTLWKAIPKSPQVP 96

Query: 546 TRS---NKPRLKKSTSLSVATSFTRVCLCAPISSYNEVFQADVPPRRSNSYPRT-KSLMV 379
           T+S   NK +L+K TSL VATSFTRVCLCAPI SYNE+ + +VPPRRSNSYPR+ K L  
Sbjct: 97  TQSSNNNKTKLRKCTSLKVATSFTRVCLCAPIYSYNEILRNEVPPRRSNSYPRSSKPLQT 156

Query: 378 PSK--RFTNVRINTENNK-VFRGKSLNDDVLMRRFVVEEKAMMHFRRRNQIEVIRKRSTM 208
            S   R  + R++TE ++ +FRGKSL DDVLM+RFV+EE+AMM  RRRNQ+EVIRKRS M
Sbjct: 157 TSHEIRTHSARLSTEGSRRIFRGKSLTDDVLMKRFVIEEEAMMQIRRRNQMEVIRKRSVM 216

Query: 207 RRKKLGPSPLSRVVMAED 154
           RRK+LGPSPLSR+V+A+D
Sbjct: 217 RRKRLGPSPLSRMVLADD 234


>emb|CAN69676.1| hypothetical protein VITISV_027733 [Vitis vinifera]
          Length = 268

 Score =  209 bits (532), Expect = 6e-52
 Identities = 111/191 (58%), Positives = 135/191 (70%), Gaps = 34/191 (17%)
 Frame = -1

Query: 618 KSWYQRAMEIATLWKSLLKPIELPTRS--------------------------NKPRLKK 517
           K WYQRAME+ATLWK++ K  E+PT +                          ++ +L+K
Sbjct: 78  KPWYQRAMEMATLWKTISKSTEIPTANTTLWKTISKSAAIRTTTTTTTTTTNPHRQKLRK 137

Query: 516 STSLSVATSFTRVCLCAPISSYNEVFQADVPPRRSNSYPRTKSLMVPSKRFTNVRINTEN 337
            TSL VATSFTRVCLCAPISSY EVF+A++PPRRSNSYPR+K    P +R +N RI+ E 
Sbjct: 138 CTSLRVATSFTRVCLCAPISSYTEVFRAELPPRRSNSYPRSKPFPSPQERISNARISMEG 197

Query: 336 N--------KVFRGKSLNDDVLMRRFVVEEKAMMHFRRRNQIEVIRKRSTMRRKKLGPSP 181
           +        +VFRGKSL DDVLMRRFVVEE+AM+  RRRNQ+EVIR+RS MRRKKLGPSP
Sbjct: 198 SARVSAEGRRVFRGKSLTDDVLMRRFVVEEEAMIQVRRRNQMEVIRRRSAMRRKKLGPSP 257

Query: 180 LSRVVMAEDEE 148
           LSR+VMAE+EE
Sbjct: 258 LSRMVMAEEEE 268


>ref|XP_003520180.1| PREDICTED: uncharacterized protein LOC100813395 [Glycine max]
          Length = 213

 Score =  208 bits (530), Expect = 1e-51
 Identities = 107/180 (59%), Positives = 129/180 (71%), Gaps = 24/180 (13%)
 Frame = -1

Query: 621 RKSWYQRAMEIATLWKSLLKPIELPTRS------------------------NKPRLKKS 514
           RK WYQRA+E+ +LWKS+ K  E+PT +                        NK +L+K 
Sbjct: 30  RKPWYQRAIEVTSLWKSVSKSTEIPTPNSSTLWKRSSSMPKSPQVPTTPSPNNKNKLRKC 89

Query: 513 TSLSVATSFTRVCLCAPISSYNEVFQADVPPRRSNSYPRTKSLMVPSKRFTNVRINTENN 334
            SL VA+SFTRVCLCAPI SYNE+ +A+VPPRRSNSYPR+K L    +R  + R++TE  
Sbjct: 90  ASLKVASSFTRVCLCAPIYSYNEILRAEVPPRRSNSYPRSKPLHASHERTPSARLSTEGR 149

Query: 333 KVFRGKSLNDDVLMRRFVVEEKAMMHFRRRNQIEVIRKRSTMRRKKLGPSPLSRVVMAED 154
           +VFRGKSL DDVLMRRFV+EE+AMM  RRRNQ+EVIRKRS MRRKKLGPSPLSR+VMA D
Sbjct: 150 RVFRGKSLTDDVLMRRFVIEEEAMMQIRRRNQMEVIRKRSMMRRKKLGPSPLSRMVMAND 209


>ref|XP_002531891.1| conserved hypothetical protein [Ricinus communis]
           gi|223528458|gb|EEF30490.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 223

 Score =  207 bits (528), Expect = 2e-51
 Identities = 111/202 (54%), Positives = 132/202 (65%), Gaps = 44/202 (21%)
 Frame = -1

Query: 621 RKSWYQRAMEIATLWKSLLKPIELP----------------------------------- 547
           RK WYQRA+E+AT WK++ K  E+P                                   
Sbjct: 10  RKPWYQRAIEMATQWKTISKSTEVPSTNSTLWKLSNPKEIPTTNATLWKSISKSTEIPIT 69

Query: 546 ---------TRSNKPRLKKSTSLSVATSFTRVCLCAPISSYNEVFQADVPPRRSNSYPRT 394
                    T  N+ +L+K TSL VATSFTRVCLCAPISSYNEVF+AD+PPRRSNSYPR+
Sbjct: 70  TTTTTTTVTTNPNRGKLRKCTSLRVATSFTRVCLCAPISSYNEVFRADIPPRRSNSYPRS 129

Query: 393 KSLMVPSKRFTNVRINTENNKVFRGKSLNDDVLMRRFVVEEKAMMHFRRRNQIEVIRKRS 214
           K      +R  + R +TE  +VFRGKSL DDVLMRRFVVEE+AMM  RRRNQ+EVIRKR+
Sbjct: 130 KPFPTTQERIPSARHSTEGRRVFRGKSLTDDVLMRRFVVEEEAMMQIRRRNQMEVIRKRN 189

Query: 213 TMRRKKLGPSPLSRVVMAEDEE 148
            MRRKKLGPSPLS++VMAE+EE
Sbjct: 190 MMRRKKLGPSPLSKMVMAEEEE 211


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