BLASTX nr result

ID: Coptis23_contig00010979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010979
         (2384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302705.1| predicted protein [Populus trichocarpa] gi|2...   261   5e-67
ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]...   251   8e-64
ref|XP_002276345.1| PREDICTED: protein FRIGIDA-like [Vitis vinif...   230   1e-57
gb|ABR17868.1| unknown [Picea sitchensis]                             226   2e-56
ref|XP_003600257.1| ABI3-interacting protein [Medicago truncatul...   216   3e-53

>ref|XP_002302705.1| predicted protein [Populus trichocarpa] gi|222844431|gb|EEE81978.1|
            predicted protein [Populus trichocarpa]
          Length = 539

 Score =  261 bits (668), Expect = 5e-67
 Identities = 183/494 (37%), Positives = 253/494 (51%), Gaps = 58/494 (11%)
 Frame = +3

Query: 768  MEKIAEALKSSSTKKQNLKKAFDLVKLNSSSL--NSFTLEWTDLETHFDS---------- 911
            ++ I  ALK   TKK NLKKA+D ++  SS L  +S++L W DL++HF S          
Sbjct: 12   LKTIEAALKLIDTKKDNLKKAYDDLQSLSSHLLSSSYSLSWADLDSHFSSVQDNLNGRFL 71

Query: 912  -LQSSLQ--------HQFNQLLYQESSVKV------------------------------ 974
             LQSSL+        H       QES                                  
Sbjct: 72   LLQSSLESLDPVAPCHSSVGASEQESPASSNPRCLGRVDSEASRSELKPSTTLTSNTVDP 131

Query: 975  -RAELKTFCFKMDGVGMRSFIMENRKDLVTNRDDVIYGFNYASDCGKLVLDALQGFYPLK 1151
             R++L + C +MD  G+R ++ +N       RD +    + A D G  VLDA++GFY  K
Sbjct: 132  SRSDLMSLCERMDVKGLRKYMKQNASKWGEIRDRLSGAMSVAPDPGSFVLDAMEGFYSSK 191

Query: 1152 --SKKARGGELGAIRRTCVLLLEGLEVVKPFISDDVRGEAKKLAVDWRGKVSAGSDDQLE 1325
              SK  +  EL  +RRTC+ LLE L   KP +S +V   AKKLA++W+ KVS   +  LE
Sbjct: 192  ANSKGDKDTELCRLRRTCLDLLEALAKNKPTLSKEVNERAKKLALEWKRKVSLNGESPLE 251

Query: 1326 ALVFLQLLASYGLVNEFNVDEVLDLLVSIARRRQAVDLFRGLGFEDKISDFIQKLNSRGK 1505
            AL FL LL +Y L  EF+V E++D  V +AR RQAV L R +   +K +D IQKL   GK
Sbjct: 252  ALGFLHLLVAYNLEKEFDVGELVDYFVIVARFRQAVVLCRAVDLGEKTADLIQKLIDSGK 311

Query: 1506 QIXXXXXXXXXXXXXXXPPVSFLKAYLKESKKVAQEVCKKGKNSVQSQNEAIAKETAYLR 1685
            Q                 PV  LKA+LKESK++ ++VC+ GKNS+  QNEA ++E   L+
Sbjct: 312  QFLAVKFIFEFGLVDKFQPVPLLKAHLKESKRLTKKVCQDGKNSINQQNEARSREVKTLK 371

Query: 1686 AIIKGIEEYKLESQFSRESIDKRIEQLEKQKVERKRAAIVAAPLPVLKPQQHQQTGSKRL 1865
            + +  I+EYKL S++ R  + KRIE LEKQK     AA  A   P  +P++ QQ GSKR 
Sbjct: 372  SALVLIDEYKLGSEYPRMDLKKRIEMLEKQKA----AAASAVDEPSHQPKKQQQAGSKRP 427

Query: 1866 RVAGSSV----DVALPTIVPSSPTHLQPTRLFPEHMFPYMSSSNIYGLAGTASTLPHYMN 2033
            R + ++V    + + P I P   +HLQP  L        + ++  YG  G+ S    Y  
Sbjct: 428  RTSATAVQNSNNGSNPVIPPFKQSHLQPASL--------LLAAGPYGSVGSISPAILYAG 479

Query: 2034 PAAGPSGAAQLDIG 2075
            P AGP G A+   G
Sbjct: 480  PPAGPYGLARAGTG 493


>ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]
            gi|223531527|gb|EEF33358.1| Protein FRIGIDA, putative
            [Ricinus communis]
          Length = 491

 Score =  251 bits (640), Expect = 8e-64
 Identities = 177/507 (34%), Positives = 264/507 (52%), Gaps = 38/507 (7%)
 Frame = +3

Query: 768  MEKIAEALKSSSTKKQNLKKAFDLVKLNSSSLNSFTLEWTDLETHFDSLQSSLQHQFNQL 947
            ++ I  AL     KKQ LK+A+D ++ +SS L+SF+L W+DL++HF S+Q++L  +F +L
Sbjct: 12   LKTIESALNLIDIKKQTLKRAYDDLQSHSSLLSSFSLSWSDLDSHFTSVQTALTRRFLRL 71

Query: 948  --------LYQESSVK---VRAELKTFCFKMDGVGMRSFIMENRKDLVTNRDDVIYGFNY 1094
                      Q   V+    R  L  FC KMDG G+R +I E+ ++    R +++     
Sbjct: 72   QSTRPGPETVQPEPVQDNPTRKALVPFCEKMDGRGLRDYISEHSREREAIRAELVGLMGL 131

Query: 1095 ASDCGKLVLDALQGFYPLKSKKARGGELGAIRRTCVLLLEGLEVVKPF--ISDDVRGEAK 1268
             SD G+++LDA++GFY  KSK  R  +L  +R++C+ LLE L  +KP    SD+V+ +AK
Sbjct: 132  VSDPGEMILDAMEGFYLSKSKGDRDVDLYRLRKSCLDLLEVLSEIKPKPKFSDEVKIKAK 191

Query: 1269 KLAVDWRGKVSAGSDDQLEALVFLQLLASYGLVNEFN-VDEVLDLLVSIARRRQAVDLFR 1445
             LA +W+ KVS   D   EAL FL L+ ++ L + F+ V+E+L+  V IAR +QA  L R
Sbjct: 192  NLAFEWKEKVSLNGDSPSEALGFLNLIVAFELKDMFDDVNELLNYFVVIARFKQATVLAR 251

Query: 1446 GLGFEDKISDFIQKLNSRGKQIXXXXXXXXXXXXXXXPPVSFLKAYLKESKKVAQEVCKK 1625
             +G  DKI+D +QKL   GKQ+                P   L+ +LKESK+   +VCK+
Sbjct: 252  DIGLGDKINDLVQKLIDSGKQLLAVKFIFEFGLTDKFQPAPLLRDHLKESKEFTDKVCKE 311

Query: 1626 GKNSVQSQNEAIAKETAYLRAIIKGIEEYKLESQFSRESIDKRIEQLEKQKVERKRAAIV 1805
             KNSV++QNEA ++E   L+++++ I+E+ LE  +    ++KRIE LEKQK +RK    V
Sbjct: 312  EKNSVKAQNEARSREVNALKSVLRYIDEHNLEFDYPHLDLEKRIEMLEKQKADRK----V 367

Query: 1806 AAPLPVLKP-------------QQH---------QQTGSKRLRVAGSSVDVALPTIV--P 1913
            AAP P  +P             QQH         Q  G+KR R+A      A+P  +  P
Sbjct: 368  AAPSPDNRPRQQPKKQQLSKKQQQHQGKQQAKKQQLKGNKRPRMAMLPGPAAVPISIAGP 427

Query: 1914 SSPTHLQPTRLFPEHMFPYMSSSNIYGLAGTASTLPHYMNPAAGPSGAAQLDIGAXXXXX 2093
            SS                  +S+  YGLAG     P   +P      ++   + +     
Sbjct: 428  SSAG----------------ASAGPYGLAGAGMCFPGNPSPVRAHPYSSNSHMSS----- 466

Query: 2094 XXXXXXXXXXXXDRSTGFGRYGVLPTY 2174
                        DRS  FG YG  P Y
Sbjct: 467  ---------SYYDRSAAFGGYGFPPQY 484


>ref|XP_002276345.1| PREDICTED: protein FRIGIDA-like [Vitis vinifera]
          Length = 533

 Score =  230 bits (586), Expect = 1e-57
 Identities = 158/498 (31%), Positives = 244/498 (48%), Gaps = 74/498 (14%)
 Frame = +3

Query: 765  KMEKIAEALKSSSTKKQNLKKAFDLVKLNSSSLNSFTLEWT-----------DLETHFDS 911
            +++ I+ ALK    KK++L+KAF+ ++ +SSSL+SFTL W+            L   F+ 
Sbjct: 3    ELKTISAALKLIDAKKESLRKAFEDLEAHSSSLSSFTLTWSAIDAHFSSIQSSLSRQFEI 62

Query: 912  LQS-----------------SLQHQFN--------------------QLLYQESSVK--- 971
            L+S                 SL  Q N                     L  QES++    
Sbjct: 63   LESRTDSVPQNDTLPTNNAVSLPAQSNAVSLPPQNNAVSLPPQNNAVSLPPQESAISRPT 122

Query: 972  ---------------VRAELKTFCFKMDGVGMRSFIMENRKDLVTNRDDVIYGFNYASDC 1106
                              +L+  C  MD   +R +IM++  D  T R +++  F  A D 
Sbjct: 123  QNSAVSRPPQNNANPSHPQLRLLCSAMDAEALRRYIMDHPNDRETLRSELLDAFQVARDP 182

Query: 1107 GKLVLDALQGFYPLKSKKARGGELGAIRRTCVLLLEGLEVVKPFISDDVRGEAKKLAVDW 1286
             K+VLDAL GF+P  + +    EL  +RR+CV +LE L +  P I +DVR  AK LA +W
Sbjct: 183  AKMVLDALTGFFPSNANEDGSSELHTMRRSCVFMLEQLMLFSPEIGEDVRQRAKSLAQEW 242

Query: 1287 RGKVSAGSDDQLEALVFLQLLASYGLVNEFNVDEVLDLLVSIARRRQAVDLFRGLGFEDK 1466
            +GKV  G D+ L+ + FL LLA+YGL ++++  E+L+LL+ + R R+   L RGL   DK
Sbjct: 243  KGKVKVG-DNTLKPMGFLHLLAAYGLGSDYDSTELLELLIDVVRYREVFGLCRGLNLVDK 301

Query: 1467 ISDFIQKLNSRGKQIXXXXXXXXXXXXXXXPPVSFLKAYLKESKKVAQEVCKKGKNSVQS 1646
            + D IQ L   GK                 P ++ LK  ++ S+ VA++V K GK+S+QS
Sbjct: 302  VPDLIQNLIGSGKPNLAVKFVLEFKLTHKFPLIAILKDIVESSRDVARKVRKDGKHSLQS 361

Query: 1647 QNEAIAKETAYLRAIIKGIEEYKLESQFSRESIDKRIEQLEKQKVERKRAAIVAAPLPVL 1826
            QNEA +KE + L+ + K I++Y L +++    +++RI++LE Q   R  A    A  P  
Sbjct: 362  QNEATSKEISALKLVTKYIKDYDLNNEYPGAPLEERIQKLESQMAARTAAKKRPALAPAP 421

Query: 1827 KPQQHQQTGSKRLRVAG-------SSVDVALPTIVPSSPTHLQPTRLFPEHMFPYMS-SS 1982
            +P+Q ++  SK+ +          S       T  P    HLQ   L P+   P+M+ S+
Sbjct: 422  RPKQQKKQKSKQAQTTATASPSVPSGAAGTSSTAAPFQQPHLQAPGLVPDGPVPFMNPSA 481

Query: 1983 NIYGLAGTASTLPHYMNP 2036
             +YG AG     P  + P
Sbjct: 482  GLYGFAGVPMGFPGNLGP 499


>gb|ABR17868.1| unknown [Picea sitchensis]
          Length = 601

 Score =  226 bits (576), Expect = 2e-56
 Identities = 146/399 (36%), Positives = 217/399 (54%), Gaps = 18/399 (4%)
 Frame = +3

Query: 783  EALKSSSTKKQNLK-KAFDLVKLNSSSLNSFTLEWTDLETHFDSLQSSLQHQFNQLLYQE 959
            E +    TKK ++K K    V  N SSL+             D  +++ + + +     E
Sbjct: 116  EKVTDDDTKKDSIKEKENGSVNANGSSLS-------------DGPEANSKKEISPSTKSE 162

Query: 960  SSVK--VRAELKTFCFKMDGVGMRSFIMENRKDLVTNRDDVIYGFNYASDCGKLVLDALQ 1133
            + V+  VR++LKT C  MD  G+R +I+E+RKD    R++V    N A D  +LVL++L+
Sbjct: 163  AKVQAQVRSQLKTLCETMDSKGLRKYIIEHRKDAAGLRNEVPSALNSAIDPSRLVLESLE 222

Query: 1134 GFYPLKSKKARGGELG--AIRRTCVLLLEGLEVV---------KPFISDDVRGEAKKLAV 1280
            GFY L+ K +   E G  A+RR C LLLE L  V          P +  +++ +AK +A 
Sbjct: 223  GFYSLEQKSSDKKESGLPALRRACTLLLESLVPVLADPILGVEHPVLPINIKEQAKGIAD 282

Query: 1281 DWRGKVSAGSD----DQLEALVFLQLLASYGLVNEFNVDEVLDLLVSIARRRQAVDLFRG 1448
            +W+ K++   D    + LEA  FLQLLA++G+ +EF+ D++  L++++ARRRQ  +L R 
Sbjct: 283  EWKSKINLEGDVANGNSLEAQAFLQLLATFGIASEFDKDDLCKLVLAVARRRQTPELCRS 342

Query: 1449 LGFEDKISDFIQKLNSRGKQIXXXXXXXXXXXXXXXPPVSFLKAYLKESKKVAQEVCKKG 1628
            LG E K+ D ++ L + G+QI               PPV  LK YLK++KK +Q   K G
Sbjct: 343  LGLESKMPDVVETLVNSGRQIEAVNFAHAFGLTEKFPPVPLLKEYLKDAKKASQASLKSG 402

Query: 1629 KNSVQSQNEAIAKETAYLRAIIKGIEEYKLESQFSRESIDKRIEQLEKQKVERKRAAIVA 1808
             NS  +QNEA  KE +  RA+IK IEE+KLESQFS + + KR+ QLEK K +RKR+A   
Sbjct: 403  NNSTAAQNEANTKELSAYRAVIKCIEEHKLESQFSPDPLQKRVAQLEKAKADRKRSAGAV 462

Query: 1809 APLPVLKPQQHQQTGSKRLRVAGSSVDVALPTIVPSSPT 1925
               P            KR R  G +  V +P +  +  T
Sbjct: 463  KSQP------------KRPRANGGNAGVYMPPLSAAERT 489


>ref|XP_003600257.1| ABI3-interacting protein [Medicago truncatula]
            gi|355489305|gb|AES70508.1| ABI3-interacting protein
            [Medicago truncatula]
          Length = 525

 Score =  216 bits (549), Expect = 3e-53
 Identities = 156/482 (32%), Positives = 244/482 (50%), Gaps = 46/482 (9%)
 Frame = +3

Query: 768  MEKIAEALKSSSTKKQNLKKAFDLVKLNSSSLNSFTLEWTDLETHFDSLQSSLQH--QFN 941
            +E I+ AL    +KKQNLK AF+ ++  SSSL    L W  L++HF SLQ SL H  QF 
Sbjct: 5    LETISSALNLIDSKKQNLKIAFENLQSKSSSL---PLSWLQLDSHFTSLQQSLTHRFQFL 61

Query: 942  QLLYQESSVKV-------------------------RAELKTFCFKMDGVGMRSFIMENR 1046
            Q L Q+S  +                          R EL+  C K+DG+G+R++I +N 
Sbjct: 62   QSLEQQSQSRTLISNSNAETSKKTNFSTNPKDPISHRKELRVLCEKIDGIGLRNYIDKNY 121

Query: 1047 KDLVTNRDDVIYGFNYASDCGKLVLDALQGFYPLKSKKARGGELGAIRRTCVLLLEGLEV 1226
            KD +    +++  F  A D G++VL +L+GFY + S       L  + R CV+LL+ L V
Sbjct: 122  KDKIRVEAELLEEFRSAPDAGEMVLQSLEGFYRV-SGNFNDRVLRKMGRICVMLLKVLSV 180

Query: 1227 VKPFISDDVRGEAKKLAVDWRGKVSAGSDDQLEALVFLQLLASYGLVNEFNVDEVLDLLV 1406
                +S   R +A KLA+DW+ ++     + L AL FL L+  +G+V+EF    +++   
Sbjct: 181  AGVNVSGKAREKALKLAIDWKVRLLGDHGNILGALGFLYLVYGFGIVSEFRGYVLVEFAA 240

Query: 1407 SIARRRQAVDLFRGLGFEDKISDFIQKLNSRGKQIXXXXXXXXXXXXXXXPPVSFLKAYL 1586
              A   + + L R +GF DK+ + +QKL  +GK +               PPV  LKA +
Sbjct: 241  RAAINGEFMQLCRDIGFTDKVPEIVQKLVEKGKHVLAVKFVFEFSLADKIPPVPILKAAV 300

Query: 1587 KESKKVAQEVCKKGKNSVQSQNEAIAKETAYLRAIIKGIEEYKLESQFSRESIDKRIEQL 1766
             ES+K+A+   ++GK  +    E   +E   L+ +I+ IE +KLES++ R+S+++RIEQL
Sbjct: 301  DESRKLARRRSEEGKRRM----EITDRELRVLKRVIEIIEIHKLESEYPRDSLEQRIEQL 356

Query: 1767 EKQ---KVERKRAAIVAAPLPVLKPQ------QHQQTGSKRLRVAGSSVDVAL------- 1898
            + Q     +R  A+I+       + Q      Q QQ G+K  R + S    A+       
Sbjct: 357  KGQDPNMKDRTPASILNQHTLQRRQQKRRMKKQQQQNGNKVPRTSTSVGPAAVLKNDTNN 416

Query: 1899 --PTIVPSSPTHLQPTRLFPEHMFPY-MSSSNIYGLAGTASTLPHYMNPAAGPSGAAQLD 2069
               T+       + P+ LFPEH  PY +  +   G+  +  T+P Y  P+ GP G A + 
Sbjct: 417  DNSTMRQYQQPLVNPSGLFPEHPNPYKIPQATSSGMVASIPTIPSYTGPSTGPYGFAGIP 476

Query: 2070 IG 2075
            +G
Sbjct: 477  MG 478


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