BLASTX nr result

ID: Coptis23_contig00010975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010975
         (1410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280371.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...   426   e-116
ref|XP_003537791.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...   407   e-111
ref|XP_002533349.1| poly(ADP-ribose) glycohydrolase, putative [R...   403   e-110
ref|XP_002309711.1| predicted protein [Populus trichocarpa] gi|2...   387   e-105
ref|XP_003599151.1| Poly(ADP-ribose) glycohydrolase [Medicago tr...   385   e-104

>ref|XP_002280371.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1 [Vitis vinifera]
            gi|296084375|emb|CBI24763.3| unnamed protein product
            [Vitis vinifera]
          Length = 562

 Score =  426 bits (1094), Expect = e-116
 Identities = 215/349 (61%), Positives = 253/349 (72%), Gaps = 13/349 (3%)
 Frame = -1

Query: 1026 PSTIRRGKHLPIINFDHLFASLCPSYSQNQENKILCLVHYFKRICLCMPKGFVSFERKVL 847
            P T R  KHLP+INFDHLF+ L   Y +  ENKI C+VHYF+RIC  MP G VSFERKVL
Sbjct: 161  PITNRDAKHLPMINFDHLFSCLYDIYDEKMENKIKCIVHYFERICSQMPTGLVSFERKVL 220

Query: 846  PLHDNCNCVSYPKSDIWSKSTVPLCRFEVCHSGLIEDHLNEALEVDFANKYLGGGALSRG 667
            PL D+  CV+YPK+D+WSKS VPLC FEV  SGLIED   EALEVDFAN+Y+GGGAL RG
Sbjct: 221  PLEDSPFCVTYPKADLWSKSAVPLCHFEVHRSGLIEDQSKEALEVDFANRYIGGGALRRG 280

Query: 666  CVQEEIRFMINPELIVGMLFLPSMSDNEAIEIVGAERFSNYSGYASTFRFSGDYLDRKPM 487
            CVQEEIRFMINPELI GMLFLPSM+DNEAIE+VG ERFSNY+GYAS+F F+GDY+D++ +
Sbjct: 281  CVQEEIRFMINPELIAGMLFLPSMADNEAIEVVGPERFSNYTGYASSFHFAGDYVDKRDV 340

Query: 486  DCMGRRRTRIIAIDALCSPKMRQYGVDCLLREINKAFCGFFDESKYQLYQKLLEDDDFCK 307
            D MGRR+T++IAIDALC  +MRQY ++CLLREINKAFCGFFD+SK Q YQ+L + D  C 
Sbjct: 341  DFMGRRKTKMIAIDALCDMRMRQYRLECLLREINKAFCGFFDQSKCQQYQRLFKGDGLCG 400

Query: 306  DRLVK-------------QLHESPSTVXXXXXXXXXXEWIVNCHNGESRKNFDFNNIIGV 166
              L +              L E+P             + I N    +   +      IGV
Sbjct: 401  AHLDQGVQGPDSISWNNLLLQEAPYASVGTNEGIYGDQQIRNAEE-KGGHSLGHRYDIGV 459

Query: 165  VTGNWGCGAFGGDVELKAVIQWLAASQALRPFILYYTFEEAALSCLDQI 19
            VTGNWGCGAFGGD ELK +IQWLAASQALRPFI Y+TF   AL  LD++
Sbjct: 460  VTGNWGCGAFGGDPELKTIIQWLAASQALRPFISYHTFGVEALKTLDKV 508


>ref|XP_003537791.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1-like [Glycine max]
          Length = 547

 Score =  407 bits (1045), Expect = e-111
 Identities = 207/328 (63%), Positives = 244/328 (74%)
 Frame = -1

Query: 1002 HLPIINFDHLFASLCPSYSQNQENKILCLVHYFKRICLCMPKGFVSFERKVLPLHDNCNC 823
            HLP+INFD LF SL   YSQ QENKI C+VHYF+RI   MPKG VSFERKVLP  ++   
Sbjct: 171  HLPMINFDVLFGSLYDDYSQKQENKIWCIVHYFQRISSEMPKGIVSFERKVLPFKNDSIH 230

Query: 822  VSYPKSDIWSKSTVPLCRFEVCHSGLIEDHLNEALEVDFANKYLGGGALSRGCVQEEIRF 643
            +SYP ++ WS S +PLCRFEV  SGLIED  + A+EVDFANKYLGGGAL RGCVQEEIRF
Sbjct: 231  ISYPDANFWSTSAIPLCRFEVHSSGLIEDQSSGAVEVDFANKYLGGGALGRGCVQEEIRF 290

Query: 642  MINPELIVGMLFLPSMSDNEAIEIVGAERFSNYSGYASTFRFSGDYLDRKPMDCMGRRRT 463
            M++PEL+VGMLFLP+M+DNEAIEIVG ERFS+Y+GYAS+FRFSGDY+D + +D +GRR+T
Sbjct: 291  MVSPELMVGMLFLPAMADNEAIEIVGVERFSSYTGYASSFRFSGDYVDEREVDTLGRRKT 350

Query: 462  RIIAIDALCSPKMRQYGVDCLLREINKAFCGFFDESKYQLYQKLLEDDDFCKDRLVKQLH 283
            RI+AIDALCSP MRQY  + LLREINKAFCGF  + KYQ YQK+L+++  C   L    +
Sbjct: 351  RIVAIDALCSPGMRQYRANFLLREINKAFCGFLYQCKYQPYQKILQENG-CTSAL---FY 406

Query: 282  ESPSTVXXXXXXXXXXEWIVNCHNGESRKNFDFNNIIGVVTGNWGCGAFGGDVELKAVIQ 103
             + ST             I N  N       D  N IGV TGNWGCGAFGGD E+K +IQ
Sbjct: 407  AATSTSMETDEGEISNHKITNSQN--DYHGMDQGNNIGVATGNWGCGAFGGDPEVKTIIQ 464

Query: 102  WLAASQALRPFILYYTFEEAALSCLDQI 19
            WLAASQALRPFI YYTF   AL  LD++
Sbjct: 465  WLAASQALRPFIAYYTFGLEALQSLDEV 492


>ref|XP_002533349.1| poly(ADP-ribose) glycohydrolase, putative [Ricinus communis]
            gi|223526814|gb|EEF29034.1| poly(ADP-ribose)
            glycohydrolase, putative [Ricinus communis]
          Length = 553

 Score =  403 bits (1036), Expect = e-110
 Identities = 205/351 (58%), Positives = 250/351 (71%), Gaps = 15/351 (4%)
 Frame = -1

Query: 1026 PSTIRRGKHLPIINFDHLFASLCPSYSQNQENKILCLVHYFKRICLCMPKGFVSFERKVL 847
            P T R  +HLP+INFDHLF  L  +YS+ QENKI C++HYF+RIC C P G VSFERKVL
Sbjct: 161  PVTGRGVRHLPVINFDHLFEILYDNYSEKQENKIKCIIHYFERICSCTPVGSVSFERKVL 220

Query: 846  PLHDNCNCVSYPKSDIWSKSTVPLCRFEVCHSGLIEDHLNEALEVDFANKYLGGGALSRG 667
            PL     C+SYPK+D W++S VPLC FEV +SG IED +++ALEVDFANKYLGGGAL  G
Sbjct: 221  PLEQLPECISYPKADFWNESAVPLCPFEVHNSGFIEDQISDALEVDFANKYLGGGALHSG 280

Query: 666  CVQEEIRFMINPELIVGMLFLPSMSDNEAIEIVGAERFSNYSGYASTFRFSGDYLDRKPM 487
            CVQEEIRFMINPELI GM FLP M DNEAIEIVGAERFS+Y+GYAS+FRFSGDY+D+  +
Sbjct: 281  CVQEEIRFMINPELIAGMFFLPCMEDNEAIEIVGAERFSDYTGYASSFRFSGDYVDKSNI 340

Query: 486  DCMGRRRTRIIAIDALCSPKMRQYGVDCLLREINKAFCGFFDESKYQLYQKLLE------ 325
            D  GR +TRI+AIDALCSP +RQY +  LLREINKAFCGF+D+SK   +++ ++      
Sbjct: 341  DSFGRHKTRIVAIDALCSPGLRQYELKYLLREINKAFCGFYDQSKCDYHKRSIQHTPLQG 400

Query: 324  -----DDDFCKDRLVKQLHESPSTVXXXXXXXXXXEWIVNCHNGESRKNFD----FNNII 172
                 D++F         +E+PS               +N   G+S K         + +
Sbjct: 401  TWSKLDNNFLS-------NEAPSASADTEMYEGEP---LNGMVGDSDKKHSSCLRIEDRV 450

Query: 171  GVVTGNWGCGAFGGDVELKAVIQWLAASQALRPFILYYTFEEAALSCLDQI 19
            G+ TGNWGCGAFGGD ELKA+IQWLAASQA RPF+LYYTF   AL  LD++
Sbjct: 451  GIATGNWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFGTEALRNLDKV 501


>ref|XP_002309711.1| predicted protein [Populus trichocarpa] gi|222852614|gb|EEE90161.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  387 bits (993), Expect = e-105
 Identities = 201/336 (59%), Positives = 238/336 (70%)
 Frame = -1

Query: 1026 PSTIRRGKHLPIINFDHLFASLCPSYSQNQENKILCLVHYFKRICLCMPKGFVSFERKVL 847
            P + R  K LP INFDHLF  +  SYS+ QENKI C++HYF+RICL MP+G VSFERKVL
Sbjct: 162  PVSDRDDKRLPTINFDHLFEDIYSSYSEKQENKIKCIIHYFERICLSMPEGSVSFERKVL 221

Query: 846  PLHDNCNCVSYPKSDIWSKSTVPLCRFEVCHSGLIEDHLNEALEVDFANKYLGGGALSRG 667
            PL     CV YPK+D W KS V LC  EV  SG IED  + ALEVDF+NKYLGGGAL RG
Sbjct: 222  PLEQLPLCVFYPKADFWIKSVVSLCTLEVHSSGFIEDQSSGALEVDFSNKYLGGGALHRG 281

Query: 666  CVQEEIRFMINPELIVGMLFLPSMSDNEAIEIVGAERFSNYSGYASTFRFSGDYLDRKPM 487
            CVQEEIRFMINPELI GMLFLP M DNEAIEIVGAERFSNY+GYAS+FRFSGD++D + +
Sbjct: 282  CVQEEIRFMINPELIAGMLFLPCMEDNEAIEIVGAERFSNYTGYASSFRFSGDHVDERDV 341

Query: 486  DCMGRRRTRIIAIDALCSPKMRQYGVDCLLREINKAFCGFFDESKYQLYQKLLEDDDFCK 307
            D   RRRTRI+AIDALC+  M QY ++ LLRE NKAFCGF D+SK   +++L +D     
Sbjct: 342  DSFRRRRTRIVAIDALCNAGMEQYKLEYLLRETNKAFCGFLDQSKCD-HKRLFQDAPSTS 400

Query: 306  DRLVKQLHESPSTVXXXXXXXXXXEWIVNCHNGESRKNFDFNNIIGVVTGNWGCGAFGGD 127
              +     ES + V           W   C + E++        IG+ TGNWGCGAFGGD
Sbjct: 401  VEIALNGEESVNQV--IRYSDKKGSW---CEDPEAK--------IGIATGNWGCGAFGGD 447

Query: 126  VELKAVIQWLAASQALRPFILYYTFEEAALSCLDQI 19
             ELK++IQWLAASQALRP +LYYTF   +L  L+Q+
Sbjct: 448  PELKSIIQWLAASQALRPSVLYYTFGLKSLQNLNQV 483


>ref|XP_003599151.1| Poly(ADP-ribose) glycohydrolase [Medicago truncatula]
            gi|355488199|gb|AES69402.1| Poly(ADP-ribose)
            glycohydrolase [Medicago truncatula]
          Length = 529

 Score =  385 bits (988), Expect = e-104
 Identities = 200/333 (60%), Positives = 238/333 (71%), Gaps = 1/333 (0%)
 Frame = -1

Query: 1014 RRGKHLPIINFDHLFASLCPSYSQNQENKILCLVHYFKRICLCMPKGFVSFERKVLPLHD 835
            R  K L  +NFD LFASL   Y+Q QE+KI C++HYF+RI   MPKG VSFERKVLP  D
Sbjct: 165  RYEKQLQPVNFDELFASLYNDYTQKQEDKIWCIIHYFQRITSNMPKGVVSFERKVLPWED 224

Query: 834  NCNCVSYPKSDIWSKSTVPLCRFEVCHSGLIEDHLNEALEVDFANKYLGGGALSRGCVQE 655
            +C  +SYP +  WS S  PLCRFEV  SGLIEDH +E +EVDFAN+YLGGGAL RGCVQE
Sbjct: 225  DCIHISYPNASFWSTSVKPLCRFEVKSSGLIEDHSSETVEVDFANEYLGGGALRRGCVQE 284

Query: 654  EIRFMINPELIVGMLFLPSMSDNEAIEIVGAERFSNYSGYASTFRFSGDYLDRKPMDCMG 475
            EIRFMI+PELI GM+FLPSM+DNEAI+IVG ERFS+Y+GYAS+FRFSGDY+D K +D  G
Sbjct: 285  EIRFMISPELIAGMIFLPSMADNEAIDIVGVERFSSYTGYASSFRFSGDYVDDKEVDPFG 344

Query: 474  RRRTRIIAIDALCSPKMRQYGVDCLLREINKAFCGFFDESKYQLYQKLLEDD-DFCKDRL 298
            RR+TRI+AIDALC P MRQY    LLREINKAFCGF  +S+YQ  QK+ +++ D  +   
Sbjct: 345  RRKTRIVAIDALCGPGMRQYREKFLLREINKAFCGFLQQSQYQRDQKIPQENFDAMETSE 404

Query: 297  VKQLHESPSTVXXXXXXXXXXEWIVNCHNGESRKNFDFNNIIGVVTGNWGCGAFGGDVEL 118
             K  ++                 I N  N       + +N IGV TGNWGCGAFGGD E+
Sbjct: 405  GKYSYQE----------------IRNSQNDYDM--MENSNDIGVATGNWGCGAFGGDPEV 446

Query: 117  KAVIQWLAASQALRPFILYYTFEEAALSCLDQI 19
            K +IQWLAASQA RPFI YYTF   AL  LD++
Sbjct: 447  KTIIQWLAASQAGRPFIAYYTFGSGALQNLDKV 479


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