BLASTX nr result

ID: Coptis23_contig00010963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010963
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002328132.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, put...   115   8e-24
ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR ...   114   1e-23
ref|XP_003526588.1| PREDICTED: LOW QUALITY PROTEIN: ser/Thr-rich...   110   2e-22

>ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|222856428|gb|EEE93975.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  117 bits (294), Expect = 1e-24
 Identities = 57/104 (54%), Positives = 75/104 (72%)
 Frame = +3

Query: 6   ERLGWSFKELLDTYGSSEVPVELMVENLMTDTTKADIHRLPGVRSFEMEYNVSSIFVEFD 185
           +RLG + K+LL  YG SE+PV+ ++E LM D  KAD  RLPG+ S + E+N+SSIFVE D
Sbjct: 156 QRLGLNLKDLLGKYGESEIPVKEVLEKLMRDKVKADKSRLPGICSIDWEFNLSSIFVEID 215

Query: 186 TPEEGYGTRSTTALSVKASGEVNFYEKYLAEEGWKDHAVNFHIE 317
           TP   YGTRST AL++ A GEV+FYE YL +  WK+  VN+ I+
Sbjct: 216 TPLGCYGTRSTAALTIGAGGEVSFYEIYLEKNVWKESTVNYRIQ 259


>ref|XP_002328132.1| predicted protein [Populus trichocarpa] gi|222837647|gb|EEE76012.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  117 bits (294), Expect = 1e-24
 Identities = 57/104 (54%), Positives = 76/104 (73%)
 Frame = +3

Query: 3   AERLGWSFKELLDTYGSSEVPVELMVENLMTDTTKADIHRLPGVRSFEMEYNVSSIFVEF 182
           A+RLG  FK+LL+ Y  +E+P + M E LMT+T K D   LPG+   E E+ +SSIF+E 
Sbjct: 159 AQRLGHGFKDLLEKYDEAELPTKEMAEILMTNTIKDDESMLPGIYPSEREHQLSSIFIEA 218

Query: 183 DTPEEGYGTRSTTALSVKASGEVNFYEKYLAEEGWKDHAVNFHI 314
           DTP   YGTRST ALSVK+SGEVNFYE+YL ++ WK+H +++ I
Sbjct: 219 DTPLGRYGTRSTCALSVKSSGEVNFYERYLDKDQWKEHTMSYQI 262


>ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, putative [Ricinus
           communis] gi|223551385|gb|EEF52871.1| Ser/Thr-rich
           protein T10 in DGCR region, putative [Ricinus communis]
          Length = 248

 Score =  115 bits (287), Expect = 8e-24
 Identities = 59/104 (56%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6   ERLGWSFKELLDTYGSS-EVPVELMVENLMTDTTKADIHRLPGVRSFEMEYNVSSIFVEF 182
           +RL  +FKE LDTYG   E+PVE M+E LM DT +A+   LPG+ S + E+N+SSIFVE 
Sbjct: 139 QRLKLNFKEQLDTYGGEDEIPVEGMLEKLMRDTVRAEKSGLPGICSLDWEHNLSSIFVEV 198

Query: 183 DTPEEGYGTRSTTALSVKASGEVNFYEKYLAEEGWKDHAVNFHI 314
            TP   YGTRSTTAL+V+A+GEV+FYE YL +  WK+  VN+ I
Sbjct: 199 HTPLGCYGTRSTTALTVRANGEVSFYETYLEDNIWKEKTVNYRI 242


>ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR region-like [Vitis
           vinifera] gi|297744476|emb|CBI37738.3| unnamed protein
           product [Vitis vinifera]
          Length = 272

 Score =  114 bits (286), Expect = 1e-23
 Identities = 58/105 (55%), Positives = 74/105 (70%)
 Frame = +3

Query: 3   AERLGWSFKELLDTYGSSEVPVELMVENLMTDTTKADIHRLPGVRSFEMEYNVSSIFVEF 182
           A RLG +FKELLD YG  E+P E MVE LM +T K D   LP +   E E+ +SSIFV+ 
Sbjct: 159 ARRLGHNFKELLDKYGEGEIPTEEMVEKLMKNTIKDDEIVLPRIYPPEREHQLSSIFVDT 218

Query: 183 DTPEEGYGTRSTTALSVKASGEVNFYEKYLAEEGWKDHAVNFHIE 317
           DTP   YGTRST+++ V+ASGEVNFYEK+L  E W+++ V + IE
Sbjct: 219 DTPLGRYGTRSTSSVCVRASGEVNFYEKHLENETWRENTVTYQIE 263


>ref|XP_003526588.1| PREDICTED: LOW QUALITY PROTEIN: ser/Thr-rich protein T10 in DGCR
           region-like [Glycine max]
          Length = 275

 Score =  110 bits (275), Expect = 2e-22
 Identities = 54/104 (51%), Positives = 74/104 (71%)
 Frame = +3

Query: 3   AERLGWSFKELLDTYGSSEVPVELMVENLMTDTTKADIHRLPGVRSFEMEYNVSSIFVEF 182
           A RL +SFKE +  YG  E+PV+ +++ LM D  KAD   LP + S + E+N+SSIFVE 
Sbjct: 159 ALRLEFSFKEHVAKYGEGEIPVKEVIQKLMKDKVKADKSSLPRICSPDWEFNLSSIFVEV 218

Query: 183 DTPEEGYGTRSTTALSVKASGEVNFYEKYLAEEGWKDHAVNFHI 314
           +TP   YGTRS+ AL+V++ GE NFYE YL +  WK+HA++FHI
Sbjct: 219 ETPLGLYGTRSSAALTVRSRGEANFYEVYLDDTKWKEHAIDFHI 262


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