BLASTX nr result

ID: Coptis23_contig00010950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010950
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134650.1| PREDICTED: uncharacterized protein LOC101212...   100   2e-19
ref|XP_002881345.1| hypothetical protein ARALYDRAFT_902544 [Arab...    99   4e-19
ref|XP_002519671.1| conserved hypothetical protein [Ricinus comm...    98   6e-19
ref|NP_565793.1| uncharacterized protein [Arabidopsis thaliana] ...    97   2e-18
ref|XP_003593909.1| hypothetical protein MTR_2g019240 [Medicago ...    96   3e-18

>ref|XP_004134650.1| PREDICTED: uncharacterized protein LOC101212042 [Cucumis sativus]
           gi|449519468|ref|XP_004166757.1| PREDICTED:
           uncharacterized protein LOC101224807 [Cucumis sativus]
          Length = 86

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/65 (66%), Positives = 55/65 (84%)
 Frame = -3

Query: 430 MGAVTASVIAIAGLILGWITMEIACKPCLDKGKEAIDRSLDPNYDPDDHDNSIHAPLNPN 251
           MGA+T +VIAI  ++ GWIT+EIACKPCL+KG+EAIDRSL+P++DPDD  + I APLNPN
Sbjct: 1   MGAITTAVIAIGAVVAGWITIEIACKPCLEKGREAIDRSLNPDFDPDDEVSDIRAPLNPN 60

Query: 250 PDGRP 236
           P+  P
Sbjct: 61  PNFTP 65


>ref|XP_002881345.1| hypothetical protein ARALYDRAFT_902544 [Arabidopsis lyrata subsp.
           lyrata] gi|297327184|gb|EFH57604.1| hypothetical protein
           ARALYDRAFT_902544 [Arabidopsis lyrata subsp. lyrata]
          Length = 81

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/81 (58%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
 Frame = -3

Query: 430 MGAVTASVIAIAGLILGWITMEIACKPCLDKGKEAIDRSLDPNYDPDDHD----NSIHAP 263
           M A+T++VIAIAG+ILGWIT+E+ACKPCL+ G+EAIDRSL+P+YDPDD D    + +HAP
Sbjct: 1   MAAITSAVIAIAGIILGWITIELACKPCLETGREAIDRSLNPDYDPDDQDVDTSSDLHAP 60

Query: 262 LNPNPDGRPQPEDGATSVKLV 200
           L PN        D +T++K V
Sbjct: 61  LIPNLPPDNSDPDPSTAIKSV 81


>ref|XP_002519671.1| conserved hypothetical protein [Ricinus communis]
           gi|223541088|gb|EEF42644.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 75

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 43/73 (58%), Positives = 62/73 (84%)
 Frame = -3

Query: 430 MGAVTASVIAIAGLILGWITMEIACKPCLDKGKEAIDRSLDPNYDPDDHDNSIHAPLNPN 251
           M A+T+++IA+AG+ILGWI +E+ACKPCL++G+ AI RSL+P+YDPDD D ++HAPLNPN
Sbjct: 1   MAAITSALIAVAGVILGWIAIEMACKPCLEQGRNAIGRSLNPDYDPDD-DLNVHAPLNPN 59

Query: 250 PDGRPQPEDGATS 212
           P+  P P D +++
Sbjct: 60  PN--PDPSDSSSN 70


>ref|NP_565793.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20197084|gb|AAM14909.1| Expressed protein
           [Arabidopsis thaliana] gi|21554021|gb|AAM63102.1|
           unknown [Arabidopsis thaliana]
           gi|51968766|dbj|BAD43075.1| hypothetical protein
           [Arabidopsis thaliana] gi|51970512|dbj|BAD43948.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|51970622|dbj|BAD44003.1| hypothetical protein
           [Arabidopsis thaliana] gi|51971725|dbj|BAD44527.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|51971883|dbj|BAD44606.1| hypothetical protein
           [Arabidopsis thaliana] gi|51971887|dbj|BAD44608.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|88010859|gb|ABD38864.1| At2g34585 [Arabidopsis
           thaliana] gi|330253901|gb|AEC08995.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 81

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/81 (56%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
 Frame = -3

Query: 430 MGAVTASVIAIAGLILGWITMEIACKPCLDKGKEAIDRSLDPNYDPDDHD----NSIHAP 263
           M A+T++VIAIAG+ILGWIT+E+ACKPCL+ G+EAIDRSL+P+YDPDD D    + + AP
Sbjct: 1   MAAITSAVIAIAGIILGWITIELACKPCLESGREAIDRSLNPDYDPDDQDVDSSSDVRAP 60

Query: 262 LNPNPDGRPQPEDGATSVKLV 200
           L PN        D  T++K V
Sbjct: 61  LIPNHPPDNSDPDPTTAIKSV 81


>ref|XP_003593909.1| hypothetical protein MTR_2g019240 [Medicago truncatula]
           gi|355482957|gb|AES64160.1| hypothetical protein
           MTR_2g019240 [Medicago truncatula]
          Length = 70

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 41/63 (65%), Positives = 56/63 (88%), Gaps = 2/63 (3%)
 Frame = -3

Query: 430 MGAVTASVIAIAGLILGWITMEIACKPCLDKGKEAIDRSLDPNYDPDDHDN--SIHAPLN 257
           MGA+T +VIA+ G+ILGWIT+EIACKPCL++G++AIDR+L+P+YDPDD D+  ++ APLN
Sbjct: 1   MGAITGAVIAVVGVILGWITIEIACKPCLEQGRQAIDRNLNPDYDPDDEDSAAAVRAPLN 60

Query: 256 PNP 248
           P P
Sbjct: 61  PAP 63


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