BLASTX nr result

ID: Coptis23_contig00010940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010940
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321488.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002321487.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002321485.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_003533358.1| PREDICTED: probable receptor-like protein ki...    59   4e-07
ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus c...    58   7e-07

>ref|XP_002321488.1| predicted protein [Populus trichocarpa] gi|222868484|gb|EEF05615.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/89 (37%), Positives = 48/89 (53%)
 Frame = -3

Query: 396 GYPGLMIKCLDYRPFINISNHLYLVQEIRYDENIVTIVDADIERQDCPQPRRNFSLSDST 217
           G+P  M+ C D RP + ISN +Y++++I Y  N + + +A +  + CP    N SL D T
Sbjct: 65  GHPNFMLTCSDKRPALTISNDVYIIKDISYATNSMRVANAAVYEETCPPLLHNISL-DRT 123

Query: 216 PYLRRDYILTDAIFFYNCTNNNHTKGLNW 130
           P L      T+  FFYNCT       +NW
Sbjct: 124 P-LTISPGYTNFSFFYNCTLKPMGFLMNW 151


>ref|XP_002321487.1| predicted protein [Populus trichocarpa] gi|222868483|gb|EEF05614.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/79 (39%), Positives = 45/79 (56%)
 Frame = -3

Query: 396 GYPGLMIKCLDYRPFINISNHLYLVQEIRYDENIVTIVDADIERQDCPQPRRNFSLSDST 217
           G+P  M+ C D RP + ISN +Y++++I Y  N + + +A +  + CP    N SL D T
Sbjct: 65  GHPNFMLTCSDKRPALTISNDVYIIKDISYATNSMRVANAAVYEETCPPLLHNISL-DRT 123

Query: 216 PYLRRDYILTDAIFFYNCT 160
           P L      T+  FFYNCT
Sbjct: 124 P-LTISPGYTNFSFFYNCT 141


>ref|XP_002321485.1| predicted protein [Populus trichocarpa] gi|222868481|gb|EEF05612.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/79 (39%), Positives = 45/79 (56%)
 Frame = -3

Query: 396 GYPGLMIKCLDYRPFINISNHLYLVQEIRYDENIVTIVDADIERQDCPQPRRNFSLSDST 217
           G+P  M+ C D RP + ISN +Y++++I Y  N + + +A +  + CP    N SL D T
Sbjct: 65  GHPNFMLTCSDKRPALTISNDVYIIKDISYATNSMRVANAAVYEETCPPLLHNISL-DRT 123

Query: 216 PYLRRDYILTDAIFFYNCT 160
           P L      T+  FFYNCT
Sbjct: 124 P-LTISPGYTNFSFFYNCT 141


>ref|XP_003533358.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Glycine max]
          Length = 835

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
 Frame = -3

Query: 396 GYPGLMIKCLDYRPFINISNHLYLVQEIRYDENIVTIVDADIERQDCPQPRRNFSLSDST 217
           GYP   I C+D  P +  SN+ +LV++I Y  +  T+ D D+    CP P  N++  D T
Sbjct: 276 GYPHFEITCMDKNPILRTSNYEFLVKDIYYSNSSFTVADIDVYEDKCPVPLYNYTF-DQT 334

Query: 216 P--YLRRDYILTDAIFFYNCT 160
           P  Y   ++ L+   FFYNC+
Sbjct: 335 PFTYSSENWNLS---FFYNCS 352


>ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus communis]
           gi|223535865|gb|EEF37526.1| hypothetical protein
           RCOM_0725500 [Ricinus communis]
          Length = 257

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = -3

Query: 396 GYPGLMIKCL-DYRPFINISNHLYLVQEIRYDENIVTIVDADIERQDCPQPRRNFSLSDS 220
           GYP L + C  D  P + + N  Y V+ I Y ++ +T+VD D+  Q CP+ R N +L D+
Sbjct: 62  GYPKLGLSCSNDDEPVLGLPNDSYYVKNINYTDSTITLVDIDVVGQTCPRARHNLTL-DN 120

Query: 219 TPYLRRDYILTDAIFFYNCTNN 154
            P    D  L +  F++NCT+N
Sbjct: 121 LPLNYTDLNL-NLSFYFNCTSN 141


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