BLASTX nr result

ID: Coptis23_contig00010932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010932
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512912.1| conserved hypothetical protein [Ricinus comm...   248   8e-64
ref|XP_002313791.1| predicted protein [Populus trichocarpa] gi|2...   247   2e-63
emb|CBI37656.3| unnamed protein product [Vitis vinifera]              235   9e-60
ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like ...   235   9e-60
ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like ...   228   1e-57

>ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
           gi|223547923|gb|EEF49415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 444

 Score =  248 bits (634), Expect = 8e-64
 Identities = 127/198 (64%), Positives = 150/198 (75%), Gaps = 9/198 (4%)
 Frame = -1

Query: 761 AERVRREKISERMRYLQDLVPGCNKIIGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 582
           AERVRREKISERM+YLQDLVPGCNKI GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR
Sbjct: 248 AERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 307

Query: 581 IDDNIDNFFAKEMLESCTDSFPPVGMLAEVINPTYHQFN---------QVQQVLSCGGSG 429
           +D NIDN  AKE    C  +FP +G+ +++ NP Y QFN         Q QQ+++C G  
Sbjct: 308 LDFNIDNLIAKETFPPCPTNFPAIGLSSDMTNPAYLQFNPVQQQQQQQQQQQLVTCCGLD 367

Query: 428 LEINHTQMSLGRTTSAPVSVPEEYLDSSCFPLSQPQSAWENDLQSVYNIAFHHQGRSTSF 249
           + IN+  M + RT SAPVS+PE Y+DSSCF   Q  S W+ DLQ++YN+AF  QGRSTSF
Sbjct: 368 MGINNPDMGIRRTISAPVSIPESYIDSSCFNQIQSSSTWDADLQNLYNVAF-DQGRSTSF 426

Query: 248 PSEPFTGNPAANNLKMEI 195
           P++PFTG   A NLKME+
Sbjct: 427 PTQPFTGAIDAGNLKMEM 444


>ref|XP_002313791.1| predicted protein [Populus trichocarpa] gi|222850199|gb|EEE87746.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  247 bits (631), Expect = 2e-63
 Identities = 123/190 (64%), Positives = 151/190 (79%), Gaps = 1/190 (0%)
 Frame = -1

Query: 761 AERVRREKISERMRYLQDLVPGCNKIIGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 582
           AERVRREKISERM+YLQDLVPGCNKI GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR
Sbjct: 251 AERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 310

Query: 581 IDDNIDNFFAKEMLESCTDSFPPVGMLAEVINPTYHQFNQV-QQVLSCGGSGLEINHTQM 405
           +D N DN FA+E   +C+ +FP +GM +++ NP Y QFN   QQ+++C G  +  +   M
Sbjct: 311 LDFNFDNLFAREAFPACSVNFPTIGMSSDMTNPAYLQFNPAQQQLVTCCGLDMGTDPPDM 370

Query: 404 SLGRTTSAPVSVPEEYLDSSCFPLSQPQSAWENDLQSVYNIAFHHQGRSTSFPSEPFTGN 225
            L RTTS+P S+PE +LDSSCF  + P  AW+ DLQ++YN+AF  QGR TSFP++PFTG+
Sbjct: 371 GLKRTTSSPESIPETFLDSSCFTQAHPPPAWDADLQNLYNVAF-DQGRQTSFPTQPFTGS 429

Query: 224 PAANNLKMEI 195
             A+NLKME+
Sbjct: 430 IEASNLKMEM 439


>emb|CBI37656.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  235 bits (599), Expect = 9e-60
 Identities = 123/190 (64%), Positives = 149/190 (78%), Gaps = 1/190 (0%)
 Frame = -1

Query: 761 AERVRREKISERMRYLQDLVPGCNKIIGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 582
           AERVRREKISERM+YLQDLVPGCNKI GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR
Sbjct: 159 AERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 218

Query: 581 IDDNIDNFFAKEMLESCTDSFPPVGMLAEVINPTYHQFNQVQQVLSCGGSGLEINHTQMS 402
           +D NIDNF AKE+  +C  +FP +GM +E+ NP+Y  ++ +QQV +CG   + IN  +++
Sbjct: 219 LDFNIDNFLAKEVFPACAANFPTIGMSSEMTNPSYLHYDPIQQVATCGVE-MGINPAEIA 277

Query: 401 LGRTTSAPVSVPEEYLDSSCFPLSQPQSAWENDLQSVYNIAFHHQGRSTSFPSE-PFTGN 225
           L RT SAPVS+P+ +LD SCF   QP S W+ DLQ++Y   F HQGR  SFPS+  FTG 
Sbjct: 278 LRRTISAPVSIPDTFLD-SCFTQIQPSSTWDADLQNLYGPEF-HQGRLMSFPSQAAFTGP 335

Query: 224 PAANNLKMEI 195
             A+NLKME+
Sbjct: 336 IDASNLKMEM 345


>ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
          Length = 456

 Score =  235 bits (599), Expect = 9e-60
 Identities = 123/190 (64%), Positives = 149/190 (78%), Gaps = 1/190 (0%)
 Frame = -1

Query: 761 AERVRREKISERMRYLQDLVPGCNKIIGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 582
           AERVRREKISERM+YLQDLVPGCNKI GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR
Sbjct: 270 AERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 329

Query: 581 IDDNIDNFFAKEMLESCTDSFPPVGMLAEVINPTYHQFNQVQQVLSCGGSGLEINHTQMS 402
           +D NIDNF AKE+  +C  +FP +GM +E+ NP+Y  ++ +QQV +CG   + IN  +++
Sbjct: 330 LDFNIDNFLAKEVFPACAANFPTIGMSSEMTNPSYLHYDPIQQVATCGVE-MGINPAEIA 388

Query: 401 LGRTTSAPVSVPEEYLDSSCFPLSQPQSAWENDLQSVYNIAFHHQGRSTSFPSE-PFTGN 225
           L RT SAPVS+P+ +LD SCF   QP S W+ DLQ++Y   F HQGR  SFPS+  FTG 
Sbjct: 389 LRRTISAPVSIPDTFLD-SCFTQIQPSSTWDADLQNLYGPEF-HQGRLMSFPSQAAFTGP 446

Query: 224 PAANNLKMEI 195
             A+NLKME+
Sbjct: 447 IDASNLKMEM 456


>ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
          Length = 420

 Score =  228 bits (581), Expect = 1e-57
 Identities = 123/197 (62%), Positives = 146/197 (74%), Gaps = 8/197 (4%)
 Frame = -1

Query: 761 AERVRREKISERMRYLQDLVPGCNKIIGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 582
           AERVRREKISERM+YLQDLVPGCNK+ GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR
Sbjct: 225 AERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 284

Query: 581 IDDNIDNFFAKEMLESCTDSFPPVGMLAEVI---NPTYHQFNQVQQVLSCGG---SGLEI 420
           +D N+D  F KE+  SC  SFP +GM  ++    NP+Y  FN  QQ++SC G   + + I
Sbjct: 285 LDFNLDELFTKEVFPSCAQSFPNIGMPLDMSMSNNPSYLPFNSAQQLVSCCGGLINNMGI 344

Query: 419 NHTQMSLGRTTS-APVSVPEEYLDSSCFPLSQPQSAWE-NDLQSVYNIAFHHQGRSTSFP 246
           +   M L R  S +PV +PE +LDSSCF    P S WE  D QS+YN+AF  QGR+ SFP
Sbjct: 345 SPPNMGLRRNISTSPVPLPETFLDSSCFTQILPSSNWEGGDFQSLYNVAF-DQGRTASFP 403

Query: 245 SEPFTGNPAANNLKMEI 195
           S+PFTG   A+NLKME+
Sbjct: 404 SQPFTGLVEASNLKMEM 420


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