BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010913
         (1545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2,...   528   e-147
dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinc...   528   e-147
sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch...   527   e-147
ref|XP_003551899.1| PREDICTED: tryptophan synthase beta chain 2,...   525   e-146
ref|XP_003599947.1| Tryptophan synthase beta chain [Medicago tru...   518   e-144

>ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
            [Glycine max]
          Length = 479

 Score =  528 bits (1360), Expect = e-147
 Identities = 261/300 (87%), Positives = 279/300 (93%), Gaps = 1/300 (0%)
 Frame = -1

Query: 1293 CTLTTKVASPLQIEVNEKNTN-STILQRPDSFGRFGKFGGKYVPETLIHALTELESAFRL 1117
            C+LT    S + +E + K  N S +LQRPDSFGRFGKFGGKYVPETL+HALTELE+AF  
Sbjct: 56   CSLTKDPYSVVPLEEHSKMDNGSVLLQRPDSFGRFGKFGGKYVPETLMHALTELEAAFYS 115

Query: 1116 LASDEAFQKELDGILKDYVGRETPLYFAERLTEHYKGPNGEGPDIYLKREDLNHTGAHKI 937
            L++DE FQKEL GILKDYVGRE+PLYFAERLTEHYK PNGEGP IYLKREDLNHTGAHKI
Sbjct: 116  LSADEEFQKELAGILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKI 175

Query: 936  NNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQSLNVFR 757
            NNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQ+LNVFR
Sbjct: 176  NNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFR 235

Query: 756  MRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVI 577
            MRLLGAEVR VHSGTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVREFHAVI
Sbjct: 236  MRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVI 295

Query: 576  GKETRKQAIEKWGGKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHA 397
            GKETRKQA+EKWGGKPD+L+ACVGGGSNAMGLF+EFVDD DVRLIGVEAAG G+DSG+HA
Sbjct: 296  GKETRKQALEKWGGKPDILIACVGGGSNAMGLFNEFVDDKDVRLIGVEAAGFGLDSGKHA 355


>dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinctorium]
          Length = 474

 Score =  528 bits (1359), Expect = e-147
 Identities = 258/299 (86%), Positives = 273/299 (91%)
 Frame = -1

Query: 1293 CTLTTKVASPLQIEVNEKNTNSTILQRPDSFGRFGKFGGKYVPETLIHALTELESAFRLL 1114
            C +T +      ++ +  +    +LQRPDSFGRFGKFGGKYVPETL+HAL ELE+AF  L
Sbjct: 52   CVMTREDLGAKSLKADAADQEPLLLQRPDSFGRFGKFGGKYVPETLMHALDELETAFHSL 111

Query: 1113 ASDEAFQKELDGILKDYVGRETPLYFAERLTEHYKGPNGEGPDIYLKREDLNHTGAHKIN 934
            A+D  FQKELDGILKDYVGRETPLYFAERLTEHYK PNGEGP IYLKREDLNHTGAHKIN
Sbjct: 112  ATDVEFQKELDGILKDYVGRETPLYFAERLTEHYKRPNGEGPQIYLKREDLNHTGAHKIN 171

Query: 933  NAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQSLNVFRM 754
            NAVAQALLAKRLGK RIIAETGAGQHGVATATVCARFGLECI+YMGAQDMERQSLNVFRM
Sbjct: 172  NAVAQALLAKRLGKTRIIAETGAGQHGVATATVCARFGLECIVYMGAQDMERQSLNVFRM 231

Query: 753  RLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIG 574
            RLLGAEVR VHSGTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVREFHAVIG
Sbjct: 232  RLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIG 291

Query: 573  KETRKQAIEKWGGKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHA 397
            KETRKQA+EKWGGKPDVLVACVGGGSNAMGLFHEFVDD DVRLIGVEAAG G+DSG+HA
Sbjct: 292  KETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRLIGVEAAGFGLDSGKHA 350


>sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic; Flags:
            Precursor gi|2792520|gb|AAB97087.1| tryptophan synthase
            beta subunit [Camptotheca acuminata]
            gi|2801771|gb|AAB97526.1| tryptophan synthase beta
            [Camptotheca acuminata]
          Length = 466

 Score =  527 bits (1358), Expect = e-147
 Identities = 256/288 (88%), Positives = 272/288 (94%)
 Frame = -1

Query: 1260 QIEVNEKNTNSTILQRPDSFGRFGKFGGKYVPETLIHALTELESAFRLLASDEAFQKELD 1081
            ++E         +LQRPDSFGRFGKFGGKYVPETL++ALTELESAFR L+ D+ FQKELD
Sbjct: 55   EMEKERSEREPDVLQRPDSFGRFGKFGGKYVPETLMYALTELESAFRSLSGDQVFQKELD 114

Query: 1080 GILKDYVGRETPLYFAERLTEHYKGPNGEGPDIYLKREDLNHTGAHKINNAVAQALLAKR 901
            GILKDYVGRE+PLYFAERLT HYK PNGEGP+IYLKREDLNHTGAHKINNAVAQALLAKR
Sbjct: 115  GILKDYVGRESPLYFAERLTLHYKRPNGEGPEIYLKREDLNHTGAHKINNAVAQALLAKR 174

Query: 900  LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQSLNVFRMRLLGAEVRAVH 721
            LGKKRIIAETGAGQHGVATATVCARFGL+C+IYMGAQDMERQ+LNVFRMRLLGAEVRAVH
Sbjct: 175  LGKKRIIAETGAGQHGVATATVCARFGLQCVIYMGAQDMERQALNVFRMRLLGAEVRAVH 234

Query: 720  SGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAIEKW 541
            SGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQA+EKW
Sbjct: 235  SGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKW 294

Query: 540  GGKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHA 397
            GGKPDVLVACVGGGSNAMGLFHEFVDD DVR+IGVEAAG G+DSG+HA
Sbjct: 295  GGKPDVLVACVGGGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHA 342


>ref|XP_003551899.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
            [Glycine max]
          Length = 471

 Score =  525 bits (1351), Expect = e-146
 Identities = 259/300 (86%), Positives = 280/300 (93%), Gaps = 1/300 (0%)
 Frame = -1

Query: 1293 CTLTTKVASPLQIEVNEKNTN-STILQRPDSFGRFGKFGGKYVPETLIHALTELESAFRL 1117
            C+LT   +S + +E ++K  N S +LQRPDSFGRFGKFGGKYVPETL+HAL++LE+AF  
Sbjct: 48   CSLTRDSSSVVPLEEHDKMGNGSVLLQRPDSFGRFGKFGGKYVPETLMHALSQLEAAFYS 107

Query: 1116 LASDEAFQKELDGILKDYVGRETPLYFAERLTEHYKGPNGEGPDIYLKREDLNHTGAHKI 937
            LA+DE FQ EL GILKDYVGRE+PLYFAERLTEHYK PNGEGP IYLKREDLNHTGAHKI
Sbjct: 108  LAADEEFQTELAGILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKI 167

Query: 936  NNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQSLNVFR 757
            NNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQ+LNVFR
Sbjct: 168  NNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFR 227

Query: 756  MRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVI 577
            MRLLGAEVR VHSGTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVREFHAVI
Sbjct: 228  MRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVI 287

Query: 576  GKETRKQAIEKWGGKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHA 397
            GKETRKQA+EKWGGKPDVL+ACVGGGSNA+GLF+EFVDD DVRLIGVEAAG G+DSG+HA
Sbjct: 288  GKETRKQALEKWGGKPDVLIACVGGGSNAIGLFNEFVDDKDVRLIGVEAAGFGLDSGKHA 347


>ref|XP_003599947.1| Tryptophan synthase beta chain [Medicago truncatula]
            gi|355488995|gb|AES70198.1| Tryptophan synthase beta
            chain [Medicago truncatula]
          Length = 466

 Score =  518 bits (1335), Expect = e-144
 Identities = 255/299 (85%), Positives = 274/299 (91%)
 Frame = -1

Query: 1293 CTLTTKVASPLQIEVNEKNTNSTILQRPDSFGRFGKFGGKYVPETLIHALTELESAFRLL 1114
            C++    +S L ++       S +LQRPDSFGRFGKFGGKYVPETL+HALT LE++F  L
Sbjct: 47   CSVIRDTSSVLPLQ---DANGSVVLQRPDSFGRFGKFGGKYVPETLMHALTLLEASFHSL 103

Query: 1113 ASDEAFQKELDGILKDYVGRETPLYFAERLTEHYKGPNGEGPDIYLKREDLNHTGAHKIN 934
            A DE FQKEL GILKDYVGRETPLYFAERLTEHYK  NGEGP IYLKREDLNHTGAHKIN
Sbjct: 104  AGDEDFQKELAGILKDYVGRETPLYFAERLTEHYKNANGEGPHIYLKREDLNHTGAHKIN 163

Query: 933  NAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQSLNVFRM 754
            NAVAQALLAK+LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQ+LNVFRM
Sbjct: 164  NAVAQALLAKKLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRM 223

Query: 753  RLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIG 574
            RLLGAEVR VH+GTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVREFHAVIG
Sbjct: 224  RLLGAEVRPVHAGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIG 283

Query: 573  KETRKQAIEKWGGKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHA 397
            KETRKQA+EKWGGKPD+L+ACVGGGSNAMGLFHEFVDDSDVRLIGVEAAG G++SG+HA
Sbjct: 284  KETRKQALEKWGGKPDILIACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGFGLNSGKHA 342