BLASTX nr result

ID: Coptis23_contig00010903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010903
         (1507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308897.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-87
ref|XP_002323256.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-84
ref|XP_002274015.1| PREDICTED: uncharacterized protein LOC100265...   172   5e-83
ref|XP_002532589.1| conserved hypothetical protein [Ricinus comm...   182   4e-82
ref|XP_002884785.1| hypothetical protein ARALYDRAFT_478351 [Arab...   179   1e-42

>ref|XP_002308897.1| predicted protein [Populus trichocarpa] gi|222854873|gb|EEE92420.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  186 bits (472), Expect(2) = 1e-87
 Identities = 96/163 (58%), Positives = 117/163 (71%)
 Frame = -2

Query: 879 DTALHVGRMDVSSNMHSAQNSHMRMIHGMNGVVIKSEPGYGDGSAFTFGADGNVLGMPPT 700
           + A    R+D   NM S Q+S++ ++ GMNG +IKSE GY   S + FGADGNVL   P+
Sbjct: 162 EIAARSSRIDAPPNMLSMQSSNIGLLQGMNGGMIKSEAGYSGTSPYMFGADGNVLEARPS 221

Query: 699 VGDTAVPSFGSVEPGPQPLNGSLLDTDTSLFGFLGQIPRNFSLSDIAADFSQSSEILESY 520
           + D +V SF SVE   Q LN S+LD DTS FGFL QIPRNFSLSD+ ADF+QSSEILE+Y
Sbjct: 222 IADASVASFSSVESSSQALNESILDADTSSFGFLSQIPRNFSLSDLTADFTQSSEILENY 281

Query: 519 SRSPFLGTDVGDFFNSPGRDCQGDNRRLDTISEGLSYDDFCSE 391
            RSP+L  D  +F +S  R+  GDNRRLDTISEG+SYDDF SE
Sbjct: 282 PRSPYLAADNDNFPDSQEREHPGDNRRLDTISEGMSYDDFGSE 324



 Score =  165 bits (417), Expect(2) = 1e-87
 Identities = 87/136 (63%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
 Frame = -3

Query: 1403 MSSGENRKVSRDDIQLVQNLIERCLQLYMNRKEVIDTLLAQAKIEPGFTELVWQKLEEEN 1224
            MSSG  R+VS  DIQ+VQNLIERCLQLYMN+ EV++TLLAQAKIEPGFTELVWQKLEEEN
Sbjct: 1    MSSGPVRRVSPKDIQVVQNLIERCLQLYMNQNEVVETLLAQAKIEPGFTELVWQKLEEEN 60

Query: 1223 REFFKAYHVRLMVKHQIMVFNRLLDRQMELMRSMYPAGVAPLPIPNGSH-SSMHQGQAPF 1047
            REFF+AY++RL VK QI  FN+LL +Q  LMR +   GV  +P  NGSH  SMHQ  A  
Sbjct: 61   REFFRAYYLRLKVKQQIEEFNKLLVQQAHLMRDLNSTGVVSMPTSNGSHIPSMHQNTA-C 119

Query: 1046 FVAEHAVPLPRTESIH 999
            +  +H  P  + ES+H
Sbjct: 120  YGPDHTGPALKPESMH 135


>ref|XP_002323256.1| predicted protein [Populus trichocarpa] gi|222867886|gb|EEF05017.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  181 bits (458), Expect(2) = 7e-84
 Identities = 93/163 (57%), Positives = 117/163 (71%)
 Frame = -2

Query: 879 DTALHVGRMDVSSNMHSAQNSHMRMIHGMNGVVIKSEPGYGDGSAFTFGADGNVLGMPPT 700
           + +    R+D   NM S Q+S++ ++ GMNG +IKSE GY   S + FGADGNVL   P+
Sbjct: 162 EISARANRIDAPPNMLSMQSSNIGLLQGMNGGMIKSEAGYSGTSPYMFGADGNVLEARPS 221

Query: 699 VGDTAVPSFGSVEPGPQPLNGSLLDTDTSLFGFLGQIPRNFSLSDIAADFSQSSEILESY 520
           + D +V SF SV+   Q LN S+LD DTS FGFL QIP+ FSLSD+ ADF+QSSEILE+Y
Sbjct: 222 IADASVASFSSVDSSSQALNESILDADTSSFGFLSQIPQVFSLSDLTADFTQSSEILENY 281

Query: 519 SRSPFLGTDVGDFFNSPGRDCQGDNRRLDTISEGLSYDDFCSE 391
           SRSPFL  D  +F +S  R+  GDNRRLD+ISEG+SYDDF SE
Sbjct: 282 SRSPFLAADNDNFPDSREREHPGDNRRLDSISEGMSYDDFGSE 324



 Score =  158 bits (399), Expect(2) = 7e-84
 Identities = 84/136 (61%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
 Frame = -3

Query: 1403 MSSGENRKVSRDDIQLVQNLIERCLQLYMNRKEVIDTLLAQAKIEPGFTELVWQKLEEEN 1224
            MSSG  R+V   DIQ+VQNLIERCLQLYMN+ EV++TLLAQAKIEPGFTELVWQKLEEEN
Sbjct: 1    MSSGPVRRVLPKDIQVVQNLIERCLQLYMNQTEVVETLLAQAKIEPGFTELVWQKLEEEN 60

Query: 1223 REFFKAYHVRLMVKHQIMVFNRLLDRQMELMRSMYPAGVAPLPIPNGSH-SSMHQGQAPF 1047
             EFF+AY++RL VK QI  FN+LL +Q  LM  +   GVAP+P  NG H S +HQ  A  
Sbjct: 61   GEFFRAYYLRLKVKQQIEEFNKLLVQQAHLMHDLNSTGVAPMPPSNGFHISPLHQNTA-C 119

Query: 1046 FVAEHAVPLPRTESIH 999
            +  +H  P  + ES+H
Sbjct: 120  YGPDHTGPTLKPESMH 135


>ref|XP_002274015.1| PREDICTED: uncharacterized protein LOC100265940 [Vitis vinifera]
            gi|297739923|emb|CBI30105.3| unnamed protein product
            [Vitis vinifera]
          Length = 325

 Score =  172 bits (437), Expect(2) = 5e-83
 Identities = 87/135 (64%), Positives = 105/135 (77%)
 Frame = -3

Query: 1403 MSSGENRKVSRDDIQLVQNLIERCLQLYMNRKEVIDTLLAQAKIEPGFTELVWQKLEEEN 1224
            MSSG  R+VSR DIQLVQNLIERCLQLYMN+KEV++TLL QAKIEP FTELVWQKL EEN
Sbjct: 1    MSSGAARRVSRQDIQLVQNLIERCLQLYMNQKEVVETLLDQAKIEPDFTELVWQKLVEEN 60

Query: 1223 REFFKAYHVRLMVKHQIMVFNRLLDRQMELMRSMYPAGVAPLPIPNGSHSSMHQGQAPFF 1044
            ++FF+AYH+RLMVKHQI VFN LL +Q++LM  + PA V  +PIPNGS  S  Q  +  +
Sbjct: 61   QDFFEAYHLRLMVKHQINVFNELLKQQVDLMHRICPARVDTVPIPNGSQLSALQQNSACY 120

Query: 1043 VAEHAVPLPRTESIH 999
             +EH  P  +  S+H
Sbjct: 121  PSEHVGPSMKPSSMH 135



 Score =  163 bits (413), Expect(2) = 5e-83
 Identities = 86/164 (52%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
 Frame = -2

Query: 879 DTALHVGRMDVSSNMHSAQNSHMRMIHGMNGVVIKSEPGYGDGSAFTFGADGNVLGMPPT 700
           D + +  R+D   +M S ++ ++ ++ GMNG +IK E GY   S F FGAD   L     
Sbjct: 162 DMSANTCRIDAPQDMLSTRSPNLGLMQGMNGGMIKPEAGYSGSSPFMFGADNTALEKRVA 221

Query: 699 VGDTAVPSFGSVEPGPQPLNGSLLDTDTSLFGFLGQIPRNFSLSDIAADFSQSSEILESY 520
           +GD +V  F SV    Q L   LLD+DTS +GFLGQIP++FSLSD+ A FSQSS+ILESY
Sbjct: 222 IGDASVTPFSSVVSNSQTLGEPLLDSDTSTYGFLGQIPQSFSLSDLTAGFSQSSDILESY 281

Query: 519 SRSPFLGTDVGDFFNSPGR-DCQGDNRRLDTISEGLSYDDFCSE 391
            RSPFL TD  +F +S GR + QGD++RLDTISEGLSY+DF S+
Sbjct: 282 PRSPFLTTDTDNFMDSRGRGENQGDSKRLDTISEGLSYEDFPSD 325


>ref|XP_002532589.1| conserved hypothetical protein [Ricinus communis]
           gi|223527677|gb|EEF29786.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 315

 Score =  182 bits (462), Expect(2) = 4e-82
 Identities = 91/163 (55%), Positives = 119/163 (73%)
 Frame = -2

Query: 879 DTALHVGRMDVSSNMHSAQNSHMRMIHGMNGVVIKSEPGYGDGSAFTFGADGNVLGMPPT 700
           + + HV R+D   NM S Q+S++ ++ G+NG +IKSE GY   + + FGADGNVL   P+
Sbjct: 153 EMSAHVNRIDAPPNMLSTQSSNIGLMQGLNGGMIKSEAGYSGTNPYMFGADGNVLEARPS 212

Query: 699 VGDTAVPSFGSVEPGPQPLNGSLLDTDTSLFGFLGQIPRNFSLSDIAADFSQSSEILESY 520
           +GD +V SF SVE   Q LN  LLD DTS +GFL  IP+ FSLSD+ ADF+QSS+ILE+Y
Sbjct: 213 LGDASVASFSSVESNSQALNEPLLDADTSSYGFLNHIPQTFSLSDLTADFAQSSDILENY 272

Query: 519 SRSPFLGTDVGDFFNSPGRDCQGDNRRLDTISEGLSYDDFCSE 391
            RSPFL +D  +F +S  ++ QGDN+RLDTISEG+SYDDF SE
Sbjct: 273 PRSPFLASDNDNFLDSREQEHQGDNKRLDTISEGVSYDDFGSE 315



 Score =  150 bits (380), Expect(2) = 4e-82
 Identities = 77/120 (64%), Positives = 97/120 (80%), Gaps = 1/120 (0%)
 Frame = -3

Query: 1355 VQNLIERCLQLYMNRKEVIDTLLAQAKIEPGFTELVWQKLEEENREFFKAYHVRLMVKHQ 1176
            VQNLIERCLQLYMN+KEV++TLLAQAKIEPGFTELVWQKLEEENREFFKAY++RL VKHQ
Sbjct: 10   VQNLIERCLQLYMNQKEVVETLLAQAKIEPGFTELVWQKLEEENREFFKAYYLRLTVKHQ 69

Query: 1175 IMVFNRLLDRQMELMRSMYPAGVAPLPIPNGSH-SSMHQGQAPFFVAEHAVPLPRTESIH 999
            I+ FN+LL++Q+ LMR + PA  A +P  NG+H   MHQ  A  + ++H+    + E++H
Sbjct: 70   IIEFNKLLEQQVRLMRQINPA--ASMPTSNGTHIPPMHQNSA-CYASDHSGSALKPENMH 126


>ref|XP_002884785.1| hypothetical protein ARALYDRAFT_478351 [Arabidopsis lyrata subsp.
            lyrata] gi|297330625|gb|EFH61044.1| hypothetical protein
            ARALYDRAFT_478351 [Arabidopsis lyrata subsp. lyrata]
          Length = 321

 Score =  179 bits (455), Expect = 1e-42
 Identities = 94/136 (69%), Positives = 110/136 (80%), Gaps = 1/136 (0%)
 Frame = -3

Query: 1403 MSSGENRKVSRDDIQLVQNLIERCLQLYMNRKEVIDTLLAQAKIEPGFTELVWQKLEEEN 1224
            MSSG  R+VSR DIQLVQNLIERCLQLYMN+KEV+DTLL QAKIEPGFTELVWQKLEEEN
Sbjct: 1    MSSGSVRRVSRQDIQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEEN 60

Query: 1223 REFFKAYHVRLMVKHQIMVFNRLLDRQMELMRSMYPAGVAPLPIPNGSH-SSMHQGQAPF 1047
            REFFKAY++RLMVKHQIM FN+LL++Q+  MR M+P GVA +   NGSH  SM+Q Q   
Sbjct: 61   REFFKAYYLRLMVKHQIMEFNKLLEQQVHHMRQMHPTGVASVQNTNGSHIQSMNQKQL-C 119

Query: 1046 FVAEHAVPLPRTESIH 999
            + +EH     ++ES H
Sbjct: 120  YPSEHTDQSLKSESAH 135



 Score =  160 bits (405), Expect = 8e-37
 Identities = 88/160 (55%), Positives = 112/160 (70%), Gaps = 1/160 (0%)
 Frame = -2

Query: 867 HVGRMDVSSNMHSAQNSHMRMIHGMNGVVIKSEPGYGDGSAFTFGADGNVLGMPPTVGDT 688
           H  R+D S NM S   SHM M+ GMNG +IKSE  + + ++F +G + N L     VGDT
Sbjct: 166 HARRVDASPNMLS---SHMPMVQGMNGGMIKSETAFTNPASFMYGGERNALEGHSAVGDT 222

Query: 687 AVPSFGSVEPGPQPLNGSLLDTDTSLFGFLGQIPRNFSLSDIAADFSQSSEILESYSRSP 508
           ++ +F + E   QPL+ +LL+ +TS  GFLGQIPRNFSLSD+ ADFSQSSEILESY RSP
Sbjct: 223 SISNFSN-ESNNQPLSDTLLEAETSTIGFLGQIPRNFSLSDLTADFSQSSEILESYDRSP 281

Query: 507 FLGTDVGDFFNSPGR-DCQGDNRRLDTISEGLSYDDFCSE 391
           FL  +  +F +S  R + QGDN+RLDTISEG SYD+  SE
Sbjct: 282 FLVANAENFLDSRERGEYQGDNKRLDTISEGFSYDNIGSE 321


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