BLASTX nr result

ID: Coptis23_contig00010902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010902
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190002.2| Outer membrane OMP85 family protein [Arabidopsi...   229   2e-70
ref|XP_002877323.1| hypothetical protein ARALYDRAFT_484837 [Arab...   228   4e-70
ref|XP_002264436.1| PREDICTED: outer envelope protein of 80 kDa,...   226   6e-70
ref|XP_003543408.1| PREDICTED: outer envelope protein of 80 kDa,...   228   9e-69
gb|AFK35820.1| unknown [Lotus japonicus]                              228   3e-68

>ref|NP_190002.2| Outer membrane OMP85 family protein [Arabidopsis thaliana]
           gi|56121918|gb|AAV74240.1| At3g44160 [Arabidopsis
           thaliana] gi|60543353|gb|AAX22274.1| At3g44160
           [Arabidopsis thaliana] gi|332644349|gb|AEE77870.1| Outer
           membrane OMP85 family protein [Arabidopsis thaliana]
          Length = 362

 Score =  229 bits (584), Expect(2) = 2e-70
 Identities = 105/129 (81%), Positives = 118/129 (91%)
 Frame = -2

Query: 388 SLCIKHPNLFGGSEKLDVSWDKGLYDSSVLIAYRRPRPEWLSQQSFVVQHSISPEIGVHG 209
           SLCIKHPNLFGGSEKLDVSWDKGLYDS+VL+A+RRPRPEW  QQ F +QHS+SPEIGVHG
Sbjct: 46  SLCIKHPNLFGGSEKLDVSWDKGLYDSNVLVAFRRPRPEWRPQQCFFIQHSLSPEIGVHG 105

Query: 208 FPVENFSRSGSSGVNLSRFSVGVDLSEPASSHWSSTTSIKLEHVRPINDGGRSISRDLDG 29
            PV+NFSRSGS GVNLS+ ++G+DLSEPASS WSSTTSIK EHVRPIND GR+I+RDLDG
Sbjct: 106 TPVDNFSRSGSGGVNLSKLALGLDLSEPASSKWSSTTSIKFEHVRPINDDGRAITRDLDG 165

Query: 28  FPVTCSGGT 2
           FP+TCSG T
Sbjct: 166 FPITCSGNT 174



 Score = 63.2 bits (152), Expect(2) = 2e-70
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = -3

Query: 633 MGAQQSIHAGKAKIDVNVDFTPKLITALTLPPPFRNSSNPLSQIIG 496
           MGAQ+SIHAG+AKIDVNVDFT KL T+L   P FR++S+PLS +IG
Sbjct: 1   MGAQKSIHAGRAKIDVNVDFTHKLCTSLMF-PAFRDTSSPLSLVIG 45


>ref|XP_002877323.1| hypothetical protein ARALYDRAFT_484837 [Arabidopsis lyrata subsp.
           lyrata] gi|297323161|gb|EFH53582.1| hypothetical protein
           ARALYDRAFT_484837 [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  228 bits (582), Expect(2) = 4e-70
 Identities = 104/128 (81%), Positives = 117/128 (91%)
 Frame = -2

Query: 385 LCIKHPNLFGGSEKLDVSWDKGLYDSSVLIAYRRPRPEWLSQQSFVVQHSISPEIGVHGF 206
           LCIKHPNLFGGSEKLDVSWDKGLYDS+VL+A+RRPRPEW  QQ F +QHS+SPEIGVHG 
Sbjct: 50  LCIKHPNLFGGSEKLDVSWDKGLYDSNVLVAFRRPRPEWRPQQCFFIQHSLSPEIGVHGT 109

Query: 205 PVENFSRSGSSGVNLSRFSVGVDLSEPASSHWSSTTSIKLEHVRPINDGGRSISRDLDGF 26
           PV+NFSRSGS GVNLS+ +VG+DLSEPASS WSSTTS+K EHVRPIND GR+I+RDLDGF
Sbjct: 110 PVDNFSRSGSGGVNLSKLAVGLDLSEPASSKWSSTTSVKFEHVRPINDDGRAITRDLDGF 169

Query: 25  PVTCSGGT 2
           P+TCSG T
Sbjct: 170 PITCSGNT 177



 Score = 63.2 bits (152), Expect(2) = 4e-70
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = -3

Query: 633 MGAQQSIHAGKAKIDVNVDFTPKLITALTLPPPFRNSSNPLSQIIG 496
           MGAQ+SIHAG+AKIDVNVDFT KL T+L   P FR++S+PLS +IG
Sbjct: 1   MGAQKSIHAGRAKIDVNVDFTHKLCTSLMF-PAFRDTSSPLSLVIG 45


>ref|XP_002264436.1| PREDICTED: outer envelope protein of 80 kDa, chloroplastic [Vitis
           vinifera] gi|296084049|emb|CBI24437.3| unnamed protein
           product [Vitis vinifera]
          Length = 360

 Score =  226 bits (575), Expect(2) = 6e-70
 Identities = 103/127 (81%), Positives = 119/127 (93%)
 Frame = -2

Query: 388 SLCIKHPNLFGGSEKLDVSWDKGLYDSSVLIAYRRPRPEWLSQQSFVVQHSISPEIGVHG 209
           SLCIKHPNLFG SEKLDVSWDKGL+DS++LIAYRRPRPEWL+QQSF++QHS+SPEIGVHG
Sbjct: 46  SLCIKHPNLFGRSEKLDVSWDKGLFDSNILIAYRRPRPEWLAQQSFIIQHSLSPEIGVHG 105

Query: 208 FPVENFSRSGSSGVNLSRFSVGVDLSEPASSHWSSTTSIKLEHVRPINDGGRSISRDLDG 29
           F  +NFSRS S GVNLSRFSVG+DL++PASS+WS+TTSI+ EHVRPI+D GRS+SRD DG
Sbjct: 106 FTTDNFSRSVSGGVNLSRFSVGMDLNDPASSNWSNTTSIRFEHVRPISDDGRSVSRDRDG 165

Query: 28  FPVTCSG 8
           FPVTCSG
Sbjct: 166 FPVTCSG 172



 Score = 65.1 bits (157), Expect(2) = 6e-70
 Identities = 34/46 (73%), Positives = 38/46 (82%)
 Frame = -3

Query: 633 MGAQQSIHAGKAKIDVNVDFTPKLITALTLPPPFRNSSNPLSQIIG 496
           MGA++SIHAGKA IDVNVDFT KL TAL L  PFR+S  PLSQ+IG
Sbjct: 1   MGARKSIHAGKATIDVNVDFTHKLCTALML-QPFRDSGGPLSQVIG 45


>ref|XP_003543408.1| PREDICTED: outer envelope protein of 80 kDa, chloroplastic-like
           [Glycine max]
          Length = 360

 Score =  228 bits (582), Expect(2) = 9e-69
 Identities = 106/127 (83%), Positives = 116/127 (91%)
 Frame = -2

Query: 388 SLCIKHPNLFGGSEKLDVSWDKGLYDSSVLIAYRRPRPEWLSQQSFVVQHSISPEIGVHG 209
           SLCIKHPNLFGGSEKLDVSWDKGLYDS+VL+AYRRPRPEWL+QQSFV+QHS+SPEIGVHG
Sbjct: 46  SLCIKHPNLFGGSEKLDVSWDKGLYDSNVLVAYRRPRPEWLAQQSFVLQHSLSPEIGVHG 105

Query: 208 FPVENFSRSGSSGVNLSRFSVGVDLSEPASSHWSSTTSIKLEHVRPINDGGRSISRDLDG 29
            PV NFSRSGS G+NLSR SVG+DL EPASS WSSTTSIK EHVRP+ND GR+I RD DG
Sbjct: 106 IPVNNFSRSGSGGINLSRLSVGMDLKEPASSKWSSTTSIKFEHVRPLNDDGRAICRDYDG 165

Query: 28  FPVTCSG 8
           FP+T SG
Sbjct: 166 FPLTSSG 172



 Score = 58.5 bits (140), Expect(2) = 9e-69
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = -3

Query: 633 MGAQQSIHAGKAKIDVNVDFTPKLITALTLPPPFRNSSNPLSQIIG 496
           MGAQ+SIHAGKAKIDVNVDFT KL  +L L P  R++ +P S +IG
Sbjct: 1   MGAQKSIHAGKAKIDVNVDFTHKLCASLML-PTLRSTGSPFSLVIG 45


>gb|AFK35820.1| unknown [Lotus japonicus]
          Length = 360

 Score =  228 bits (580), Expect(2) = 3e-68
 Identities = 103/129 (79%), Positives = 116/129 (89%)
 Frame = -2

Query: 388 SLCIKHPNLFGGSEKLDVSWDKGLYDSSVLIAYRRPRPEWLSQQSFVVQHSISPEIGVHG 209
           SLCIKHPNLFGGSEKLDVSWDKGLYDS++L+AYRRPRPEWL+QQSFV+QHS+SPEI VHG
Sbjct: 46  SLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPEWLAQQSFVLQHSLSPEIAVHG 105

Query: 208 FPVENFSRSGSSGVNLSRFSVGVDLSEPASSHWSSTTSIKLEHVRPINDGGRSISRDLDG 29
            P+ NFSRSGS GVNLS+ SVG+DL EP S+ WSSTT IK EHVRP+ND GR+ISRD DG
Sbjct: 106 IPINNFSRSGSGGVNLSKLSVGLDLKEPMSTKWSSTTGIKFEHVRPLNDDGRAISRDYDG 165

Query: 28  FPVTCSGGT 2
           FP+TCSG T
Sbjct: 166 FPLTCSGST 174



 Score = 57.4 bits (137), Expect(2) = 3e-68
 Identities = 30/46 (65%), Positives = 34/46 (73%)
 Frame = -3

Query: 633 MGAQQSIHAGKAKIDVNVDFTPKLITALTLPPPFRNSSNPLSQIIG 496
           MGAQ+SIHAGKAKIDVNVDFT KL  +L   P  R+  NPL  +IG
Sbjct: 1   MGAQKSIHAGKAKIDVNVDFTHKLCASLMF-PTLRSYENPLRLVIG 45


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