BLASTX nr result

ID: Coptis23_contig00010857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010857
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple...   164   5e-39
emb|CBI38713.3| unnamed protein product [Vitis vinifera]              164   5e-39
ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana] ...   157   1e-36
ref|NP_001154198.1| uncharacterized protein [Arabidopsis thalian...   157   1e-36
emb|CAB80949.1| hypothetical protein [Arabidopsis thaliana]           157   1e-36

>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
            vinifera]
          Length = 1105

 Score =  164 bits (416), Expect = 5e-39
 Identities = 80/91 (87%), Positives = 83/91 (91%)
 Frame = -2

Query: 273  HEIEEQCVEVFSAPADREKVKSCLSELGEMNNSFKQVLNGGMEQLVTTVTPRIRPVLDSV 94
            HEIEEQC EVF  PADREKVKSCLSELGEM+N FKQ LN GMEQLV TVTPRIRPVLDSV
Sbjct: 888  HEIEEQCAEVFPTPADREKVKSCLSELGEMSNIFKQTLNAGMEQLVATVTPRIRPVLDSV 947

Query: 93   GIISYELSEAEYAENEVNDPWVQKLLHAVET 1
            G ISYELSEAEYA+NEVNDPWVQ+LLHAVET
Sbjct: 948  GTISYELSEAEYADNEVNDPWVQRLLHAVET 978


>emb|CBI38713.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  164 bits (416), Expect = 5e-39
 Identities = 80/91 (87%), Positives = 83/91 (91%)
 Frame = -2

Query: 273 HEIEEQCVEVFSAPADREKVKSCLSELGEMNNSFKQVLNGGMEQLVTTVTPRIRPVLDSV 94
           HEIEEQC EVF  PADREKVKSCLSELGEM+N FKQ LN GMEQLV TVTPRIRPVLDSV
Sbjct: 490 HEIEEQCAEVFPTPADREKVKSCLSELGEMSNIFKQTLNAGMEQLVATVTPRIRPVLDSV 549

Query: 93  GIISYELSEAEYAENEVNDPWVQKLLHAVET 1
           G ISYELSEAEYA+NEVNDPWVQ+LLHAVET
Sbjct: 550 GTISYELSEAEYADNEVNDPWVQRLLHAVET 580


>ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana]
            gi|332656619|gb|AEE82019.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 1110

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/91 (80%), Positives = 84/91 (92%)
 Frame = -2

Query: 273  HEIEEQCVEVFSAPADREKVKSCLSELGEMNNSFKQVLNGGMEQLVTTVTPRIRPVLDSV 94
            HEIEEQC EVF APADRE++KSCLSELGE++++FKQ+LN GMEQLV TVTPRIRPVLD+V
Sbjct: 893  HEIEEQCTEVFPAPADRERIKSCLSELGELSSTFKQLLNSGMEQLVATVTPRIRPVLDTV 952

Query: 93   GIISYELSEAEYAENEVNDPWVQKLLHAVET 1
              ISYEL+E EYAENEVNDPWVQ+LLH+VET
Sbjct: 953  ATISYELTETEYAENEVNDPWVQRLLHSVET 983


>ref|NP_001154198.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75154279|sp|Q8L838.1|COG4_ARATH RecName:
           Full=Conserved oligomeric Golgi complex subunit 4;
           Short=COG complex subunit 4; AltName: Full=Component of
           oligomeric Golgi complex 4 gi|21539537|gb|AAM53321.1|
           unknown protein [Arabidopsis thaliana]
           gi|34098793|gb|AAQ56779.1| At4g01400 [Arabidopsis
           thaliana] gi|332656620|gb|AEE82020.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 738

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/91 (80%), Positives = 84/91 (92%)
 Frame = -2

Query: 273 HEIEEQCVEVFSAPADREKVKSCLSELGEMNNSFKQVLNGGMEQLVTTVTPRIRPVLDSV 94
           HEIEEQC EVF APADRE++KSCLSELGE++++FKQ+LN GMEQLV TVTPRIRPVLD+V
Sbjct: 521 HEIEEQCTEVFPAPADRERIKSCLSELGELSSTFKQLLNSGMEQLVATVTPRIRPVLDTV 580

Query: 93  GIISYELSEAEYAENEVNDPWVQKLLHAVET 1
             ISYEL+E EYAENEVNDPWVQ+LLH+VET
Sbjct: 581 ATISYELTETEYAENEVNDPWVQRLLHSVET 611


>emb|CAB80949.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1117

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/91 (80%), Positives = 84/91 (92%)
 Frame = -2

Query: 273  HEIEEQCVEVFSAPADREKVKSCLSELGEMNNSFKQVLNGGMEQLVTTVTPRIRPVLDSV 94
            HEIEEQC EVF APADRE++KSCLSELGE++++FKQ+LN GMEQLV TVTPRIRPVLD+V
Sbjct: 900  HEIEEQCTEVFPAPADRERIKSCLSELGELSSTFKQLLNSGMEQLVATVTPRIRPVLDTV 959

Query: 93   GIISYELSEAEYAENEVNDPWVQKLLHAVET 1
              ISYEL+E EYAENEVNDPWVQ+LLH+VET
Sbjct: 960  ATISYELTETEYAENEVNDPWVQRLLHSVET 990


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