BLASTX nr result

ID: Coptis23_contig00010854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010854
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323992.1| predicted protein [Populus trichocarpa] gi|2...   321   2e-85
emb|CBI40064.3| unnamed protein product [Vitis vinifera]              310   3e-82
ref|XP_002270526.1| PREDICTED: 50S ribosomal protein L13-like [V...   310   3e-82
gb|ABK95352.1| unknown [Populus trichocarpa]                          307   3e-81
ref|XP_002300092.1| predicted protein [Populus trichocarpa] gi|2...   307   3e-81

>ref|XP_002323992.1| predicted protein [Populus trichocarpa] gi|222866994|gb|EEF04125.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  321 bits (823), Expect = 2e-85
 Identities = 159/205 (77%), Positives = 178/205 (86%)
 Frame = -3

Query: 991 MATTAAASTLNRNMKTALAGLRRINLEGLRWRVFDARGQVLGRLAAQISTVIQGKDKPTY 812
           MA+ AAAS  N NMK ALAGL+RINLEGLRWRVFDA+GQVLGRLA+QISTVIQGKDKPTY
Sbjct: 1   MASQAAASAFNGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTY 60

Query: 811 TPHREEGDMCVVLNAKDICVTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA 632
            P+R++GD+CVVLNAKD+CVTGRK+TDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA
Sbjct: 61  APYRDDGDICVVLNAKDVCVTGRKMTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA 120

Query: 631 VLRMLPRNXXXXXXXXXXRIFVDNEHPFHDRPLEPYIMPPRSVRELRPRARRAMIRAQKK 452
           VLRMLPRN          RIF D+EHPF DRPLEPY+MPPR VRE+RPRARRAMIRAQKK
Sbjct: 121 VLRMLPRNKLRDDRDRKLRIFPDSEHPFGDRPLEPYVMPPRQVREMRPRARRAMIRAQKK 180

Query: 451 AENQQQKGDSGKIARRKREINNEIT 377
           AE QQ++G + K   +KRE+  E+T
Sbjct: 181 AE-QQEQGGNDKRKGKKREVEAELT 204


>emb|CBI40064.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  310 bits (795), Expect = 3e-82
 Identities = 154/200 (77%), Positives = 173/200 (86%)
 Frame = -3

Query: 976 AASTLNRNMKTALAGLRRINLEGLRWRVFDARGQVLGRLAAQISTVIQGKDKPTYTPHRE 797
           A S+ N NMK ALAGLRRINLEGLRWRVFDA+GQVLGRLA+QISTVIQGKDKPTYTP+RE
Sbjct: 2   ATSSFNGNMKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYTPNRE 61

Query: 796 EGDMCVVLNAKDICVTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKAVLRML 617
           +GDMC+VLNAKDI VTGRKLT+KFYRWHTGYIGHLKERSLKDQ+AKDPTEVIRKAVLRML
Sbjct: 62  DGDMCIVLNAKDISVTGRKLTNKFYRWHTGYIGHLKERSLKDQLAKDPTEVIRKAVLRML 121

Query: 616 PRNXXXXXXXXXXRIFVDNEHPFHDRPLEPYIMPPRSVRELRPRARRAMIRAQKKAENQQ 437
           PRN          RIF  +EHPF+DRPLEPY+MPPR VRE+RPRARRA IRAQKKAE QQ
Sbjct: 122 PRNKLRDDRDRKLRIFAGDEHPFNDRPLEPYVMPPRQVREMRPRARRATIRAQKKAE-QQ 180

Query: 436 QKGDSGKIARRKREINNEIT 377
           Q+G +    +RK+E+  E++
Sbjct: 181 QQGTTDTRKKRKKEVEPEVS 200


>ref|XP_002270526.1| PREDICTED: 50S ribosomal protein L13-like [Vitis vinifera]
          Length = 216

 Score =  310 bits (795), Expect = 3e-82
 Identities = 154/200 (77%), Positives = 173/200 (86%)
 Frame = -3

Query: 976 AASTLNRNMKTALAGLRRINLEGLRWRVFDARGQVLGRLAAQISTVIQGKDKPTYTPHRE 797
           A S+ N NMK ALAGLRRINLEGLRWRVFDA+GQVLGRLA+QISTVIQGKDKPTYTP+RE
Sbjct: 2   ATSSFNGNMKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYTPNRE 61

Query: 796 EGDMCVVLNAKDICVTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKAVLRML 617
           +GDMC+VLNAKDI VTGRKLT+KFYRWHTGYIGHLKERSLKDQ+AKDPTEVIRKAVLRML
Sbjct: 62  DGDMCIVLNAKDISVTGRKLTNKFYRWHTGYIGHLKERSLKDQLAKDPTEVIRKAVLRML 121

Query: 616 PRNXXXXXXXXXXRIFVDNEHPFHDRPLEPYIMPPRSVRELRPRARRAMIRAQKKAENQQ 437
           PRN          RIF  +EHPF+DRPLEPY+MPPR VRE+RPRARRA IRAQKKAE QQ
Sbjct: 122 PRNKLRDDRDRKLRIFAGDEHPFNDRPLEPYVMPPRQVREMRPRARRATIRAQKKAE-QQ 180

Query: 436 QKGDSGKIARRKREINNEIT 377
           Q+G +    +RK+E+  E++
Sbjct: 181 QQGTTDTRKKRKKEVEPEVS 200


>gb|ABK95352.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  307 bits (787), Expect = 3e-81
 Identities = 152/205 (74%), Positives = 174/205 (84%)
 Frame = -3

Query: 991 MATTAAASTLNRNMKTALAGLRRINLEGLRWRVFDARGQVLGRLAAQISTVIQGKDKPTY 812
           MA+ AAAS  N +MK A AGL+RINLEGLRWRVFDA+GQVLGRLA+QISTVIQGKDKPTY
Sbjct: 1   MASQAAASAFNSSMKKAHAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTY 60

Query: 811 TPHREEGDMCVVLNAKDICVTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA 632
            P+R++GDMCVVLNAKD+CVTGRK+TDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA
Sbjct: 61  APYRDDGDMCVVLNAKDVCVTGRKMTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA 120

Query: 631 VLRMLPRNXXXXXXXXXXRIFVDNEHPFHDRPLEPYIMPPRSVRELRPRARRAMIRAQKK 452
           VLRMLPRN          RIF D+EHPF D+P+E Y+MPPR VRE+RPRA+RAMIRAQKK
Sbjct: 121 VLRMLPRNKLRDDRDRKLRIFPDSEHPFGDQPVEAYVMPPRKVREMRPRAQRAMIRAQKK 180

Query: 451 AENQQQKGDSGKIARRKREINNEIT 377
           AE  +Q G+  K   +KRE+  ++T
Sbjct: 181 AEQLEQAGND-KRKGKKREVEADLT 204


>ref|XP_002300092.1| predicted protein [Populus trichocarpa] gi|222847350|gb|EEE84897.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  307 bits (786), Expect = 3e-81
 Identities = 152/205 (74%), Positives = 174/205 (84%)
 Frame = -3

Query: 991 MATTAAASTLNRNMKTALAGLRRINLEGLRWRVFDARGQVLGRLAAQISTVIQGKDKPTY 812
           MA+ AAAS  N +MK A AGL+RINLEGLRWRVFDA+GQVLGRLA+QISTVIQGKDKPTY
Sbjct: 1   MASQAAASAFNGSMKKAHAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTY 60

Query: 811 TPHREEGDMCVVLNAKDICVTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA 632
            P+R++GDMCVVLNAKD+CVTGRK+TDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA
Sbjct: 61  APYRDDGDMCVVLNAKDVCVTGRKMTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA 120

Query: 631 VLRMLPRNXXXXXXXXXXRIFVDNEHPFHDRPLEPYIMPPRSVRELRPRARRAMIRAQKK 452
           VLRMLPRN          RIF D+EHPF D+P+E Y+MPPR VRE+RPRA+RAMIRAQKK
Sbjct: 121 VLRMLPRNKLRDDRDRKLRIFPDSEHPFGDQPVEAYVMPPRKVREMRPRAQRAMIRAQKK 180

Query: 451 AENQQQKGDSGKIARRKREINNEIT 377
           AE  +Q G+  K   +KRE+  ++T
Sbjct: 181 AEQLEQAGND-KRKGKKREVEADLT 204


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