BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010841
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...   164   7e-39
ref|XP_002304067.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arab...   155   4e-36

>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  169 bits (427), Expect = 3e-40
 Identities = 84/114 (73%), Positives = 98/114 (85%)
 Frame = -1

Query: 344 KGHQPDEELCSSLILQLGRVGAPSEAFSCYNMLRYSKRTMNKALHGKMLNILVAGGILKD 165
           KGHQP+EELCSSLI  LG++ A S+AFS YNMLRYSKRTM KALH K+L+ILVAG +LKD
Sbjct: 480 KGHQPEEELCSSLISHLGKIRAHSQAFSVYNMLRYSKRTMCKALHEKILHILVAGRLLKD 539

Query: 164 AYVVVKDNADRISHASLKKFAVSFMKKGNINLINDVVKAVHGSGHKIDQEVFGM 3
           AYVVVKDN   IS  S+KKFA +FMK GN+NLINDV+KA+HGSG+KIDQE+F M
Sbjct: 540 AYVVVKDNEGLISKPSIKKFATAFMKFGNVNLINDVMKAIHGSGYKIDQELFQM 593


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Cucumis sativus]
          Length = 668

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/112 (71%), Positives = 97/112 (86%)
 Frame = -1

Query: 344 KGHQPDEELCSSLILQLGRVGAPSEAFSCYNMLRYSKRTMNKALHGKMLNILVAGGILKD 165
           KGHQP+EELCSSLIL LG + A SEAFS YN+L+YSKRTM KALH K+L+IL+AG +LKD
Sbjct: 482 KGHQPEEELCSSLILSLGNIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKD 541

Query: 164 AYVVVKDNADRISHASLKKFAVSFMKKGNINLINDVVKAVHGSGHKIDQEVF 9
           AYVVVKDNA  IS  +++KFA  FMK GN+NLINDV+KA+HGSG+KIDQ++F
Sbjct: 542 AYVVVKDNAGVISKPAIRKFAFGFMKFGNVNLINDVMKAIHGSGYKIDQDLF 593


>ref|XP_002304067.1| predicted protein [Populus trichocarpa] gi|222841499|gb|EEE79046.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/111 (71%), Positives = 94/111 (84%)
 Frame = -1

Query: 344 KGHQPDEELCSSLILQLGRVGAPSEAFSCYNMLRYSKRTMNKALHGKMLNILVAGGILKD 165
           KGHQP EELCSSL+  LG++ A SEAFS Y+ML+YSKRTM KA H K+L+IL+AG +LKD
Sbjct: 265 KGHQPAEELCSSLLFHLGKIKAHSEAFSVYSMLKYSKRTMCKAFHEKILHILIAGKLLKD 324

Query: 164 AYVVVKDNADRISHASLKKFAVSFMKKGNINLINDVVKAVHGSGHKIDQEV 12
           AYVVVKDNA  IS A++KKFA SF+K GNINLINDV+K +HGSG+KIDQ V
Sbjct: 325 AYVVVKDNAKFISSAAIKKFAKSFVKLGNINLINDVLKVIHGSGYKIDQAV 375


>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/114 (69%), Positives = 98/114 (85%)
 Frame = -1

Query: 344 KGHQPDEELCSSLILQLGRVGAPSEAFSCYNMLRYSKRTMNKALHGKMLNILVAGGILKD 165
           KGHQP EELCSSLIL LG++ A +EAFS Y+ML+ SKRTM+KA H  +L+IL+AG +LKD
Sbjct: 383 KGHQPMEELCSSLILHLGKIKAHAEAFSVYSMLKSSKRTMSKAFHEDILHILIAGRLLKD 442

Query: 164 AYVVVKDNADRISHASLKKFAVSFMKKGNINLINDVVKAVHGSGHKIDQEVFGM 3
           AYVVVKDNA+ IS A++KKFA SF+K G+INLINDV+K +HGSG+KIDQE+F M
Sbjct: 443 AYVVVKDNAELISPAAIKKFASSFVKLGDINLINDVMKVIHGSGYKIDQELFLM 496


>ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
           lyrata] gi|297335683|gb|EFH66100.1| hypothetical protein
           ARALYDRAFT_888388 [Arabidopsis lyrata subsp. lyrata]
          Length = 665

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/112 (67%), Positives = 91/112 (81%)
 Frame = -1

Query: 344 KGHQPDEELCSSLILQLGRVGAPSEAFSCYNMLRYSKRTMNKALHGKMLNILVAGGILKD 165
           KGH+ +EELCSSLI  LG++ APSEAFS YNMLRYSKRT+ K LH K+L+IL+ G +LKD
Sbjct: 477 KGHRLEEELCSSLIYHLGKIRAPSEAFSVYNMLRYSKRTICKELHEKILHILIHGDLLKD 536

Query: 164 AYVVVKDNADRISHASLKKFAVSFMKKGNINLINDVVKAVHGSGHKIDQEVF 9
           AY+VVKDNA  IS  +LKKF  +FM  GNINL+NDV+K +HGSGHKIDQ  F
Sbjct: 537 AYIVVKDNAKMISQPTLKKFGRAFMISGNINLVNDVLKVLHGSGHKIDQVQF 588