BLASTX nr result

ID: Coptis23_contig00010831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010831
         (2091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27158.3| unnamed protein product [Vitis vinifera]               60   2e-06

>emb|CBI27158.3| unnamed protein product [Vitis vinifera]
          Length = 1664

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 122/502 (24%), Positives = 189/502 (37%), Gaps = 46/502 (9%)
 Frame = -3

Query: 2083 NRLAMDN--EPINLAKYPGLCRSNPNVSVLSDKQFLEQGNSIFGGQRGLSSIECSSMKQR 1910
            N   MDN  EP    +Y  LC+ N N    S KQ     NS              S +  
Sbjct: 506  NECQMDNNIEPAISTEY--LCKPNLNRLDYSGKQIKGTDNS--------------SAQPY 549

Query: 1909 SPNLLFCAPLRDDAVEQVNNLFSTSFRSKTG---FSAVDSSSVGIADKNSPQALASYPKN 1739
              +  FC   +  + E      +  +RS T    +S + S  +     +S  ++   P  
Sbjct: 550  FESSAFCLREQRTSCEDTIATSTDPYRSGTPTIHYSGLPSCGL----YHSSNSVQECPHC 605

Query: 1738 SADG-LFPFSRSKVVPFLVETENSNLPPMRSGSLSIPDSFGDYIPLDSINNFECTSPSIL 1562
            S+ G  F   ++K  PF  E+         +  L I    G+ +   + N++EC+     
Sbjct: 606  SSLGNAFSSPKNKSPPFHAESRGV------TRCLDITSGLGNCVSSPTPNDYECSCYRTT 659

Query: 1561 FPETLS--SRCKSVDPTKLQVCRGLTFPEPSLTSFPPSRHLSFGRKDMDPSFSRGEDPST 1388
             P +    S  K+V+ + L+  RG +F   SL   P    L  G  D    +S      T
Sbjct: 660  MPFSGPGYSESKAVEFSDLEGYRGSSFAG-SLLPVP----LLKGENDGPAPYSFWPIEET 714

Query: 1387 P-DVCRPERLRHEEPLYTNCEPSCTIFPN-------KFHLQVGFDPLDSQSTDSQGELEQ 1232
            P D   PE   ++  L            N       + H Q     L+++S +       
Sbjct: 715  PYDYGYPEASHYKNKLLPKGGDGEAYAANVPLSNEVQCHSQGDLCSLEAKSLNFHENNMS 774

Query: 1231 D---KPTSPYPGLRSDIPDKRPSVFSRLNVKKVASVPDDDE-ISISKH-VDLSVNQIMDT 1067
            D   +    + G+ S     R SVFSRL     A   D+D  +  ++H VD SV+++MD 
Sbjct: 775  DHDFQSRKKFRGMYSAHQKSRNSVFSRLTFAAEACAEDNDSPVDYNEHNVDTSVDELMDM 834

Query: 1066 LYTYEKIWGKSTKKSQCRVMKSYVDYSSNAEDTHN-VCKDSSLPSEEKQCNL-------- 914
            L+     W K  +KS     K  + +  N E+  N   K      E  QC L        
Sbjct: 835  LHDSSYHWAKKLRKS-----KPLIGHHDNGENIRNKKLKTIYSEMERDQCTLFPIQKNMD 889

Query: 913  -----------ETVEEIPINFRRRSKIRK----VQXXXXXXXXXXXGLAAATSHKRRKLI 779
                        T  +  ++F+RRS+  K    ++           GL  A   KRRKL+
Sbjct: 890  ATLGNGESDHERTKGKPAVHFKRRSETGKNRDEIKTGGFVESTGSNGLLGA-HQKRRKLV 948

Query: 778  RPSFASG-GTDDKGAVGENCGN 716
            RP+F+    + +K  +GEN  N
Sbjct: 949  RPNFSKNEPSHEKDVIGENTPN 970


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