BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010810
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   417   e-114
ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putat...   404   e-110
emb|CBI24406.3| unnamed protein product [Vitis vinifera]              404   e-110
ref|XP_004140175.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   370   e-100
ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   363   6e-98

>ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
            vinifera]
          Length = 882

 Score =  417 bits (1073), Expect = e-114
 Identities = 213/360 (59%), Positives = 263/360 (73%), Gaps = 5/360 (1%)
 Frame = -2

Query: 1067 PLDDVTETSLPEEDDGRVYFVPYRWWKEAQKGSVVSEDDENNRGGILYTARSSSNSYVAV 888
            P +D+++++ P+ DD RVYFVPYRWWKEAQ  ++    D N + G+LY+AR  S+    +
Sbjct: 4    PSEDLSDSTHPQNDDVRVYFVPYRWWKEAQDSNLA---DGNAKRGVLYSARPGSSYVGPM 60

Query: 887  KFINQYFNSDIVFNLHREDES-HQNGSVEEGVSGRDYALVSGEMWLKALRWHSDSNAVAK 711
            K IN  FNSD+VFNL RE++S H N + E GVSGRDYALV G++WL+AL+WH+DS    K
Sbjct: 61   KIINNIFNSDLVFNLRREEDSGHSNENGEVGVSGRDYALVPGDLWLQALKWHTDSRVATK 120

Query: 710  DAGNNTTVEEDTAEVYPLQLRLSVLRETNLLTVKISKKENTVELYKRACKIFNVEYEGLR 531
            D    + +E+D A+VYPL LRLS+LRETN L VKI+KK+N VE ++RACKIF+VE E L 
Sbjct: 121  DGRTFSVMEDDMADVYPLLLRLSILRETNSLGVKITKKDNAVEFFRRACKIFSVESELLH 180

Query: 530  IWDFSGRTTLFSVIDVNKFPKDCRRQSDQEIFLELQVYGLSDFTKSREGKKDDSASQQTK 351
            IWDFSG+TTLF + D NK PKDC+RQSDQEI LELQVYGLSD  + REGKKD+ A+Q + 
Sbjct: 181  IWDFSGQTTLFFINDKNKLPKDCQRQSDQEILLELQVYGLSDSLRCREGKKDEMAAQHSN 240

Query: 350  MSVFSSGVSFMNNGSTGNMESCLFLSNS----SAPSTAXXXXXXXXXXXXXTCFMNSALQ 183
            ++  S G S M NGS   M S    +NS     +   A             TCFMNS+LQ
Sbjct: 241  LAGSSCGASLMMNGSLACMNSNSVHTNSPVFYGSSGEAGSLGLTGLQNLGNTCFMNSSLQ 300

Query: 182  CLAHTPKLTDYFLGDYNREINPDNPLGMNGELALAFGDLIRKLWAPGAAPVAPRLFKSKL 3
            CLAHTPKL DYFLGDY+REIN +N LGM+GE+ALAFGDLIRKLWAPGA PVAPR+FKSKL
Sbjct: 301  CLAHTPKLVDYFLGDYSREINHENALGMDGEIALAFGDLIRKLWAPGATPVAPRMFKSKL 360


>ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223545031|gb|EEF46545.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 889

 Score =  404 bits (1038), Expect = e-110
 Identities = 219/366 (59%), Positives = 258/366 (70%), Gaps = 7/366 (1%)
 Frame = -2

Query: 1079 DNTTPLDDVTETSLPEED--DGRVYFVPYRWWKEAQKGSVVSEDDENNRGGILYTARSSS 906
            D +  L D+T    P+ D  D R+YFVPYRWWK+AQ  ++ SE D   + G+LY   S S
Sbjct: 5    DVSEDLSDLTHRQ-PDSDNNDQRLYFVPYRWWKDAQDSTISSESD--GKRGVLYMGTSGS 61

Query: 905  NSYVAVKFINQYFNSDIVFNLHREDESHQNG-SVEEGVSGRDYALVSGEMWLKALRWHSD 729
            +    +K IN  FNSD+V NL RE+ES QNG + E GVSGRDYALVSGEMWLKAL+WHSD
Sbjct: 62   SYAGPMKLINNIFNSDLVLNLRREEESLQNGENGEVGVSGRDYALVSGEMWLKALKWHSD 121

Query: 728  SNAVAKDAGNNTTVEEDTAEVYPLQLRLSVLRETNLLTVKISKKENTVELYKRACKIFNV 549
            +   +K +   +  E+D ++VYPLQLRLSVLRE N L VKISKKEN  EL++RACKIF+V
Sbjct: 122  AKVASKSSKTFSAAEDDMSDVYPLQLRLSVLREVNSLGVKISKKENATELFRRACKIFSV 181

Query: 548  EYEGLRIWDFSGRTTLFSVIDVNKFPKDCRRQSDQEIFLELQVYGLSDFTKSREGKKDDS 369
            + E LRIWDFSG+TTLF V D +K PK+ +RQ DQEI LELQVYGLSD  K R+GKKDD+
Sbjct: 182  DSEMLRIWDFSGQTTLFFVNDKSKSPKESQRQLDQEIVLELQVYGLSDNMKCRDGKKDDA 241

Query: 368  ASQQTKMSVFSSGVSFMNNGSTGNMESCLFLSNSSA----PSTAXXXXXXXXXXXXXTCF 201
             +Q       SSG S M NGS  N  +  F  +SSA       A             TCF
Sbjct: 242  VAQNCN-GTHSSGTSLM-NGSVSNTSTSFFRCDSSALFGKSGEAGSLGLTGLQNLGNTCF 299

Query: 200  MNSALQCLAHTPKLTDYFLGDYNREINPDNPLGMNGELALAFGDLIRKLWAPGAAPVAPR 21
            MNSA+QCLAHTPKL DYFLGDY REIN DNPLGM+GE+ALAFGDL+RKLWAPGA PVAPR
Sbjct: 300  MNSAIQCLAHTPKLVDYFLGDYGREINHDNPLGMDGEIALAFGDLLRKLWAPGATPVAPR 359

Query: 20   LFKSKL 3
             FKSKL
Sbjct: 360  TFKSKL 365


>emb|CBI24406.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  404 bits (1037), Expect = e-110
 Identities = 208/356 (58%), Positives = 259/356 (72%), Gaps = 1/356 (0%)
 Frame = -2

Query: 1067 PLDDVTETSLPEEDDGRVYFVPYRWWKEAQKGSVVSEDDENNRGGILYTARSSSNSYVAV 888
            P +D+++++ P+ DD RVYFVPYRWWKEAQ  ++    D N + G+LY+AR  S+    +
Sbjct: 4    PSEDLSDSTHPQNDDVRVYFVPYRWWKEAQDSNLA---DGNAKRGVLYSARPGSSYVGPM 60

Query: 887  KFINQYFNSDIVFNLHREDES-HQNGSVEEGVSGRDYALVSGEMWLKALRWHSDSNAVAK 711
            K IN  FNSD+VFNL RE++S H N + E GVSGRDYALV G++WL+AL+WH+DS    K
Sbjct: 61   KIINNIFNSDLVFNLRREEDSGHSNENGEVGVSGRDYALVPGDLWLQALKWHTDSRVATK 120

Query: 710  DAGNNTTVEEDTAEVYPLQLRLSVLRETNLLTVKISKKENTVELYKRACKIFNVEYEGLR 531
            D    + +E+D A+VYPL LRLS+LRETN L VKI+KK+N VE ++RACKIF+VE E L 
Sbjct: 121  DGRTFSVMEDDMADVYPLLLRLSILRETNSLGVKITKKDNAVEFFRRACKIFSVESELLH 180

Query: 530  IWDFSGRTTLFSVIDVNKFPKDCRRQSDQEIFLELQVYGLSDFTKSREGKKDDSASQQTK 351
            IWDFSG+TTLF + D NK PKDC+RQSDQEI LELQVYGLSD  + REGKKD+ A+Q + 
Sbjct: 181  IWDFSGQTTLFFINDKNKLPKDCQRQSDQEILLELQVYGLSDSLRCREGKKDEMAAQHSN 240

Query: 350  MSVFSSGVSFMNNGSTGNMESCLFLSNSSAPSTAXXXXXXXXXXXXXTCFMNSALQCLAH 171
            +    +G SF   GS+G   S       +  +T               CFMNS+LQCLAH
Sbjct: 241  L----AGSSFF-YGSSGEAGSLGLTGLQNLGNT---------------CFMNSSLQCLAH 280

Query: 170  TPKLTDYFLGDYNREINPDNPLGMNGELALAFGDLIRKLWAPGAAPVAPRLFKSKL 3
            TPKL DYFLGDY+REIN +N LGM+GE+ALAFGDLIRKLWAPGA PVAPR+FKSKL
Sbjct: 281  TPKLVDYFLGDYSREINHENALGMDGEIALAFGDLIRKLWAPGATPVAPRMFKSKL 336


>ref|XP_004140175.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis
            sativus]
          Length = 877

 Score =  370 bits (950), Expect = e-100
 Identities = 204/361 (56%), Positives = 253/361 (70%), Gaps = 8/361 (2%)
 Frame = -2

Query: 1061 DDVTETSLP--EEDDGRVYFVPYRWWKEAQKGSVVSEDDENNRGGILYTARSSSNSYVAV 888
            +D++ +SL    + D RVYFVPYRWWK+AQ        D + + G  + A   S+    +
Sbjct: 6    EDLSSSSLNLHSDTDQRVYFVPYRWWKDAQDSLT---GDADGKRGHSFLASPGSSYAGPM 62

Query: 887  KFINQYFNSDIVFNLHREDESHQNG-SVEEGVSGRDYALVSGEMWLKALRWHSDSNAVAK 711
            K IN  F+SD+VFNL RE++S QN  + E G+SGRDYALVSGEMW++AL+WHSDS +  +
Sbjct: 63   KIINSIFSSDLVFNLRREEDSSQNSENGEVGISGRDYALVSGEMWVEALKWHSDSKSSTR 122

Query: 710  DAGNNTTVEEDTAEVYPLQLRLSVLRETNLLTVKISKKENTVELYKRACKIFNVEYEGLR 531
            + G+ +  E++ A+VYPLQLRLS+ RE NLL V+ISKK+N VEL++RACK+FNVE E LR
Sbjct: 123  NGGSFSVAEDNIADVYPLQLRLSIQREANLLGVRISKKDNVVELFRRACKLFNVESELLR 182

Query: 530  IWDFSGRT-TLFSVIDVNKFPKDCRRQSDQEIFLELQVYGLSDFTKSREGKKDDSASQQT 354
            IWDFSG T +LFS  + NK     +RQSDQE+ LELQVYGLSDF K +EGKKD+ A+   
Sbjct: 183  IWDFSGHTISLFS--NSNK-----QRQSDQEVLLELQVYGLSDFIKCKEGKKDELAN--- 232

Query: 353  KMSVFSSGVSFMNNGSTGNMESCLFLSNSSAPS----TAXXXXXXXXXXXXXTCFMNSAL 186
             +   SS  S M NG++G   +  F  NSS  S     A             TCFMNSAL
Sbjct: 233  SILGNSSATSLMMNGASGTGSASCFRVNSSVFSGSSREAGSLGLTGLQNLGNTCFMNSAL 292

Query: 185  QCLAHTPKLTDYFLGDYNREINPDNPLGMNGELALAFGDLIRKLWAPGAAPVAPRLFKSK 6
            QCL HTPKL DYFLGDY REIN DNPLGMNGE+ALAFGD++RKLWAPGA+PVAPR FKSK
Sbjct: 293  QCLVHTPKLVDYFLGDYGREINHDNPLGMNGEIALAFGDMLRKLWAPGASPVAPRTFKSK 352

Query: 5    L 3
            L
Sbjct: 353  L 353


>ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine max]
          Length = 874

 Score =  363 bits (931), Expect = 6e-98
 Identities = 196/344 (56%), Positives = 239/344 (69%), Gaps = 3/344 (0%)
 Frame = -2

Query: 1025 DGRVYFVPYRWWKEAQKGSVVSEDDENNRGGILYTARSSSNSYVAVKFINQYFNSDIVFN 846
            D RVYFVP+RWWK+AQ    + E D + + GI + +   S+    +K IN  FNSD+VF+
Sbjct: 20   DQRVYFVPHRWWKDAQDS--MPEADSDKKKGIAFASFPGSSYAGPMKIINNIFNSDLVFS 77

Query: 845  LHREDES---HQNGSVEEGVSGRDYALVSGEMWLKALRWHSDSNAVAKDAGNNTTVEEDT 675
            L RE++S    +NG V  GVSGRD+ALVSG+MWL+AL+WHSDS  V KD    +  + D 
Sbjct: 78   LRREEDSPRIRENGEV--GVSGRDFALVSGDMWLQALKWHSDSKNVMKDDKGFSATDSDM 135

Query: 674  AEVYPLQLRLSVLRETNLLTVKISKKENTVELYKRACKIFNVEYEGLRIWDFSGRTTLFS 495
            A+VYPLQLRLSV RETN   V+ISKK+N VEL+KRACK+F+V+ E L IWD+S + T F 
Sbjct: 136  ADVYPLQLRLSVQRETNSFGVRISKKDNAVELFKRACKMFSVDSEMLCIWDYSDQIT-FL 194

Query: 494  VIDVNKFPKDCRRQSDQEIFLELQVYGLSDFTKSREGKKDDSASQQTKMSVFSSGVSFMN 315
            + D N+ P DC+RQSDQEI LELQVYGLSD  + REGKKD+ A+     S+  +G     
Sbjct: 195  MNDNNQVPVDCQRQSDQEILLELQVYGLSDSIRCREGKKDEMANFSGSASLKMNGTYDGA 254

Query: 314  NGSTGNMESCLFLSNSSAPSTAXXXXXXXXXXXXXTCFMNSALQCLAHTPKLTDYFLGDY 135
            N    N  S  F   SS P  A             TCFMNS+LQCLAHTPKL DYFL DY
Sbjct: 255  NSDCMNANSLTF---SSGPGEAGSLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDYFLEDY 311

Query: 134  NREINPDNPLGMNGELALAFGDLIRKLWAPGAAPVAPRLFKSKL 3
             REIN DNPLGMNGE+ALAFGDL+RKLWAPGA+PV+PR+FKSKL
Sbjct: 312  IREINHDNPLGMNGEIALAFGDLLRKLWAPGASPVSPRIFKSKL 355