BLASTX nr result

ID: Coptis23_contig00010807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010807
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277747.2| PREDICTED: zinc finger CCCH domain-containin...   101   5e-20
emb|CBI29869.3| unnamed protein product [Vitis vinifera]              101   5e-20
emb|CAN64254.1| hypothetical protein VITISV_007408 [Vitis vinifera]   101   5e-20
gb|ADE74631.1| unknown [Vitis vinifera]                               100   2e-19
ref|XP_004136593.1| PREDICTED: zinc finger CCCH domain-containin...   100   2e-19

>ref|XP_002277747.2| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Vitis vinifera]
          Length = 703

 Score =  101 bits (252), Expect = 5e-20
 Identities = 53/76 (69%), Positives = 60/76 (78%), Gaps = 3/76 (3%)
 Frame = +1

Query: 1   FETGNNGGDEPDLSWVQSLVKESPPEIKEK---PVVPTSAVAPSGENSNSKAQIESLDHA 171
           FE GNNG +EPDLSWVQSLVKESP E KEK   P + T+  + S + SN  +QIES+DHA
Sbjct: 628 FELGNNG-EEPDLSWVQSLVKESPTETKEKAATPALDTAEASSSSDGSNLNSQIESIDHA 686

Query: 172 VLGAWLEQMQLDQLVA 219
           VLGAWLEQMQLDQLVA
Sbjct: 687 VLGAWLEQMQLDQLVA 702


>emb|CBI29869.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  101 bits (252), Expect = 5e-20
 Identities = 53/76 (69%), Positives = 60/76 (78%), Gaps = 3/76 (3%)
 Frame = +1

Query: 1   FETGNNGGDEPDLSWVQSLVKESPPEIKEK---PVVPTSAVAPSGENSNSKAQIESLDHA 171
           FE GNNG +EPDLSWVQSLVKESP E KEK   P + T+  + S + SN  +QIES+DHA
Sbjct: 544 FELGNNG-EEPDLSWVQSLVKESPTETKEKAATPALDTAEASSSSDGSNLNSQIESIDHA 602

Query: 172 VLGAWLEQMQLDQLVA 219
           VLGAWLEQMQLDQLVA
Sbjct: 603 VLGAWLEQMQLDQLVA 618


>emb|CAN64254.1| hypothetical protein VITISV_007408 [Vitis vinifera]
          Length = 156

 Score =  101 bits (252), Expect = 5e-20
 Identities = 53/76 (69%), Positives = 60/76 (78%), Gaps = 3/76 (3%)
 Frame = +1

Query: 1   FETGNNGGDEPDLSWVQSLVKESPPEIKEK---PVVPTSAVAPSGENSNSKAQIESLDHA 171
           FE GNNG +EPDLSWVQSLVKESP E KEK   P + T+  + S + SN  +QIES+DHA
Sbjct: 81  FELGNNG-EEPDLSWVQSLVKESPTETKEKAATPALDTAEASSSSDGSNLNSQIESIDHA 139

Query: 172 VLGAWLEQMQLDQLVA 219
           VLGAWLEQMQLDQLVA
Sbjct: 140 VLGAWLEQMQLDQLVA 155


>gb|ADE74631.1| unknown [Vitis vinifera]
          Length = 740

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/81 (67%), Positives = 62/81 (76%), Gaps = 9/81 (11%)
 Frame = +1

Query: 1   FETGNNGGDEPDLSWVQSLVKESPPEI-KEKPVVPTSAVAPSGEN--------SNSKAQI 153
           FE GNNG +EPDLSWVQSLVKESPPE+ KEK   P SA A SGE         SNS +QI
Sbjct: 660 FELGNNG-EEPDLSWVQSLVKESPPEMMKEKLAAPVSASASSGEGLNSNSQIESNSNSQI 718

Query: 154 ESLDHAVLGAWLEQMQLDQLV 216
           +S+DH+V+GAWLEQMQLDQLV
Sbjct: 719 DSVDHSVIGAWLEQMQLDQLV 739


>ref|XP_004136593.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Cucumis sativus] gi|449516906|ref|XP_004165487.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           30-like isoform 1 [Cucumis sativus]
           gi|449516908|ref|XP_004165488.1| PREDICTED: zinc finger
           CCCH domain-containing protein 30-like isoform 2
           [Cucumis sativus]
          Length = 701

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/76 (69%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
 Frame = +1

Query: 1   FETGNNGGDEPDLSWVQSLVKESPPEIKEKPVVPTSAV---APSGENSNSKAQIESLDHA 171
           FE GNNG +EPDLSWVQSLVKESP EIKEK   P   V     SGE+SN  +Q+ES+DHA
Sbjct: 624 FELGNNG-EEPDLSWVQSLVKESPTEIKEKQAHPNLGVDSFVSSGESSNMNSQMESVDHA 682

Query: 172 VLGAWLEQMQLDQLVA 219
            LGAWLEQMQLD LVA
Sbjct: 683 ALGAWLEQMQLDHLVA 698


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