BLASTX nr result
ID: Coptis23_contig00010807
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00010807 (461 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277747.2| PREDICTED: zinc finger CCCH domain-containin... 101 5e-20 emb|CBI29869.3| unnamed protein product [Vitis vinifera] 101 5e-20 emb|CAN64254.1| hypothetical protein VITISV_007408 [Vitis vinifera] 101 5e-20 gb|ADE74631.1| unknown [Vitis vinifera] 100 2e-19 ref|XP_004136593.1| PREDICTED: zinc finger CCCH domain-containin... 100 2e-19 >ref|XP_002277747.2| PREDICTED: zinc finger CCCH domain-containing protein 30-like [Vitis vinifera] Length = 703 Score = 101 bits (252), Expect = 5e-20 Identities = 53/76 (69%), Positives = 60/76 (78%), Gaps = 3/76 (3%) Frame = +1 Query: 1 FETGNNGGDEPDLSWVQSLVKESPPEIKEK---PVVPTSAVAPSGENSNSKAQIESLDHA 171 FE GNNG +EPDLSWVQSLVKESP E KEK P + T+ + S + SN +QIES+DHA Sbjct: 628 FELGNNG-EEPDLSWVQSLVKESPTETKEKAATPALDTAEASSSSDGSNLNSQIESIDHA 686 Query: 172 VLGAWLEQMQLDQLVA 219 VLGAWLEQMQLDQLVA Sbjct: 687 VLGAWLEQMQLDQLVA 702 >emb|CBI29869.3| unnamed protein product [Vitis vinifera] Length = 619 Score = 101 bits (252), Expect = 5e-20 Identities = 53/76 (69%), Positives = 60/76 (78%), Gaps = 3/76 (3%) Frame = +1 Query: 1 FETGNNGGDEPDLSWVQSLVKESPPEIKEK---PVVPTSAVAPSGENSNSKAQIESLDHA 171 FE GNNG +EPDLSWVQSLVKESP E KEK P + T+ + S + SN +QIES+DHA Sbjct: 544 FELGNNG-EEPDLSWVQSLVKESPTETKEKAATPALDTAEASSSSDGSNLNSQIESIDHA 602 Query: 172 VLGAWLEQMQLDQLVA 219 VLGAWLEQMQLDQLVA Sbjct: 603 VLGAWLEQMQLDQLVA 618 >emb|CAN64254.1| hypothetical protein VITISV_007408 [Vitis vinifera] Length = 156 Score = 101 bits (252), Expect = 5e-20 Identities = 53/76 (69%), Positives = 60/76 (78%), Gaps = 3/76 (3%) Frame = +1 Query: 1 FETGNNGGDEPDLSWVQSLVKESPPEIKEK---PVVPTSAVAPSGENSNSKAQIESLDHA 171 FE GNNG +EPDLSWVQSLVKESP E KEK P + T+ + S + SN +QIES+DHA Sbjct: 81 FELGNNG-EEPDLSWVQSLVKESPTETKEKAATPALDTAEASSSSDGSNLNSQIESIDHA 139 Query: 172 VLGAWLEQMQLDQLVA 219 VLGAWLEQMQLDQLVA Sbjct: 140 VLGAWLEQMQLDQLVA 155 >gb|ADE74631.1| unknown [Vitis vinifera] Length = 740 Score = 100 bits (248), Expect = 2e-19 Identities = 55/81 (67%), Positives = 62/81 (76%), Gaps = 9/81 (11%) Frame = +1 Query: 1 FETGNNGGDEPDLSWVQSLVKESPPEI-KEKPVVPTSAVAPSGEN--------SNSKAQI 153 FE GNNG +EPDLSWVQSLVKESPPE+ KEK P SA A SGE SNS +QI Sbjct: 660 FELGNNG-EEPDLSWVQSLVKESPPEMMKEKLAAPVSASASSGEGLNSNSQIESNSNSQI 718 Query: 154 ESLDHAVLGAWLEQMQLDQLV 216 +S+DH+V+GAWLEQMQLDQLV Sbjct: 719 DSVDHSVIGAWLEQMQLDQLV 739 >ref|XP_004136593.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like [Cucumis sativus] gi|449516906|ref|XP_004165487.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like isoform 1 [Cucumis sativus] gi|449516908|ref|XP_004165488.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like isoform 2 [Cucumis sativus] Length = 701 Score = 99.8 bits (247), Expect = 2e-19 Identities = 53/76 (69%), Positives = 58/76 (76%), Gaps = 3/76 (3%) Frame = +1 Query: 1 FETGNNGGDEPDLSWVQSLVKESPPEIKEKPVVPTSAV---APSGENSNSKAQIESLDHA 171 FE GNNG +EPDLSWVQSLVKESP EIKEK P V SGE+SN +Q+ES+DHA Sbjct: 624 FELGNNG-EEPDLSWVQSLVKESPTEIKEKQAHPNLGVDSFVSSGESSNMNSQMESVDHA 682 Query: 172 VLGAWLEQMQLDQLVA 219 LGAWLEQMQLD LVA Sbjct: 683 ALGAWLEQMQLDHLVA 698