BLASTX nr result

ID: Coptis23_contig00010798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010798
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281733.1| PREDICTED: peroxisomal membrane protein 11A ...   332   9e-89
ref|XP_002281759.1| PREDICTED: peroxisomal membrane protein 11A ...   329   9e-88
ref|XP_002510349.1| peroxisomal biogenesis factor, putative [Ric...   328   1e-87
ref|XP_002326892.1| predicted protein [Populus trichocarpa] gi|2...   326   8e-87
ref|XP_004152708.1| PREDICTED: peroxisomal membrane protein 11A-...   325   2e-86

>ref|XP_002281733.1| PREDICTED: peroxisomal membrane protein 11A [Vitis vinifera]
          Length = 260

 Score =  332 bits (852), Expect = 9e-89
 Identities = 167/240 (69%), Positives = 199/240 (82%)
 Frame = +3

Query: 30  KPCSKERDFLNHLESYLAKRDGVDKLLKISRYASKIILSSSLLQEPHPLSHRLKSFESSV 209
           K  S  RDFLNHLE+YLAKRDGVDKLLKISRYA++IIL+SSLL E   L+ RLKSFESSV
Sbjct: 21  KSVSNNRDFLNHLEAYLAKRDGVDKLLKISRYATRIILASSLLPETLTLNRRLKSFESSV 80

Query: 210 GISRKAFRLGKFVQDINALRTASFESKQDVLLNLIAYGGEGVYYFVEQFVWLGKSGFIDK 389
           G+SRKAFRLGKFVQD+NALR   F+SK+DV+L++IAYGGEG+Y F+EQFVW  KSG ID 
Sbjct: 81  GVSRKAFRLGKFVQDLNALRNTCFDSKEDVILSIIAYGGEGLYMFIEQFVWFVKSGLIDA 140

Query: 390 KNLYTLQKISAWAEFIGYFGSIALKVRDLKSICEAERRCESSVEIAMLRGNGYEMEVKEI 569
           K+   LQKISAWAEF+GY GSI+LK+RDLK I E E R  S++EI++ RG  Y+ E K+I
Sbjct: 141 KHSRNLQKISAWAEFVGYIGSISLKIRDLKRINEDESRLLSTIEISISRGLKYDEEAKKI 200

Query: 570 DKLKEQKLMKKLSVVQDCADGLMAFADIRDGKGLGSSPFFIASAGMLSALISTHKNWLSC 749
            K+KE++LMK+LS+VQD ADGLMA ADIRDGKG  S P  ++SAG+LSALIS HKNWLSC
Sbjct: 201 QKMKEKRLMKRLSIVQDLADGLMALADIRDGKGRLSGPLLMSSAGLLSALISAHKNWLSC 260


>ref|XP_002281759.1| PREDICTED: peroxisomal membrane protein 11A [Vitis vinifera]
           gi|302142451|emb|CBI19654.3| unnamed protein product
           [Vitis vinifera]
          Length = 260

 Score =  329 bits (843), Expect = 9e-88
 Identities = 167/240 (69%), Positives = 199/240 (82%)
 Frame = +3

Query: 30  KPCSKERDFLNHLESYLAKRDGVDKLLKISRYASKIILSSSLLQEPHPLSHRLKSFESSV 209
           K  S +RDFLNHLE+YLAKRDGVDKLLKISRYA+KIIL+SSLL E   L+ RLKSFESSV
Sbjct: 21  KSVSNDRDFLNHLEAYLAKRDGVDKLLKISRYATKIILASSLLPETLTLNRRLKSFESSV 80

Query: 210 GISRKAFRLGKFVQDINALRTASFESKQDVLLNLIAYGGEGVYYFVEQFVWLGKSGFIDK 389
           G+SRKAFRLGKFVQD+NALR + F+SK+DV+L++IAYGGEG+Y FVEQFVW  KSG ID 
Sbjct: 81  GVSRKAFRLGKFVQDLNALRNSCFDSKEDVILSIIAYGGEGLYMFVEQFVWFVKSGLIDA 140

Query: 390 KNLYTLQKISAWAEFIGYFGSIALKVRDLKSICEAERRCESSVEIAMLRGNGYEMEVKEI 569
           K+   LQKISAWA F+G+ GSI+LK+RDLK I E E R  S++EI++ RG  Y+ E K+I
Sbjct: 141 KHSRNLQKISAWAGFVGHIGSISLKIRDLKRINEDESRLLSTIEISISRGLKYDEEAKKI 200

Query: 570 DKLKEQKLMKKLSVVQDCADGLMAFADIRDGKGLGSSPFFIASAGMLSALISTHKNWLSC 749
            KLKE++LMK+LS+VQD ADGLMA ADIRDGKG  S P  ++SAG+LSAL S HKNWLSC
Sbjct: 201 HKLKEKRLMKRLSIVQDLADGLMALADIRDGKGRLSGPLLMSSAGLLSALTSAHKNWLSC 260


>ref|XP_002510349.1| peroxisomal biogenesis factor, putative [Ricinus communis]
           gi|223551050|gb|EEF52536.1| peroxisomal biogenesis
           factor, putative [Ricinus communis]
          Length = 261

 Score =  328 bits (842), Expect = 1e-87
 Identities = 168/256 (65%), Positives = 207/256 (80%), Gaps = 8/256 (3%)
 Frame = +3

Query: 6   TKNSMEANKPC--------SKERDFLNHLESYLAKRDGVDKLLKISRYASKIILSSSLLQ 161
           +K + E+ KP         SKE+DFLNHLE+YLAKRDGVDKLLKISRYASKIIL+S+ L 
Sbjct: 6   SKTATESQKPAIPKTLAPPSKEKDFLNHLETYLAKRDGVDKLLKISRYASKIILASNTLP 65

Query: 162 EPHPLSHRLKSFESSVGISRKAFRLGKFVQDINALRTASFESKQDVLLNLIAYGGEGVYY 341
           E   L+ RLKSFESSVG+SRKAFRLGKFVQDIN++R + F++KQ+V+L++IAYGGEG+YY
Sbjct: 66  ETLILTQRLKSFESSVGLSRKAFRLGKFVQDINSIRNSHFDTKQEVVLSIIAYGGEGLYY 125

Query: 342 FVEQFVWLGKSGFIDKKNLYTLQKISAWAEFIGYFGSIALKVRDLKSICEAERRCESSVE 521
           FVEQFVWL K+G ID K+   L KISAWAEF+GY GSI++K+RDLK + E E    SS+E
Sbjct: 126 FVEQFVWLVKAGLIDGKHTKKLGKISAWAEFVGYIGSISIKLRDLKKLNENEVCLGSSIE 185

Query: 522 IAMLRGNGYEMEVKEIDKLKEQKLMKKLSVVQDCADGLMAFADIRDGKGLGSSPFFIASA 701
           +A +RGNG+E E K + KL+E+KLMKKLS+ QD ADGLMA ADIRDGKG  S P +++ A
Sbjct: 186 VAAVRGNGFEEEEKRMRKLREKKLMKKLSIAQDFADGLMALADIRDGKGRLSGPLWVSVA 245

Query: 702 GMLSALISTHKNWLSC 749
           G+LSALIST KNW+SC
Sbjct: 246 GLLSALISTRKNWVSC 261


>ref|XP_002326892.1| predicted protein [Populus trichocarpa] gi|222835207|gb|EEE73642.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  326 bits (835), Expect = 8e-87
 Identities = 165/235 (70%), Positives = 197/235 (83%)
 Frame = +3

Query: 45  ERDFLNHLESYLAKRDGVDKLLKISRYASKIILSSSLLQEPHPLSHRLKSFESSVGISRK 224
           +RDFLNHLE YLAKRDGVDKLLKISRYA+KIIL+SS+L E   ++ RLKSFESSVG+SRK
Sbjct: 21  QRDFLNHLEVYLAKRDGVDKLLKISRYATKIILASSVLPETLIVTKRLKSFESSVGLSRK 80

Query: 225 AFRLGKFVQDINALRTASFESKQDVLLNLIAYGGEGVYYFVEQFVWLGKSGFIDKKNLYT 404
           AFRLGKFVQD+NALR + F+SKQ+++L+ IAYGGEG+YYFVEQFVWL KSG ID K+  +
Sbjct: 81  AFRLGKFVQDVNALRGSHFDSKQEIILSFIAYGGEGLYYFVEQFVWLAKSGLIDSKHSKS 140

Query: 405 LQKISAWAEFIGYFGSIALKVRDLKSICEAERRCESSVEIAMLRGNGYEMEVKEIDKLKE 584
           L KISAWAEF+GY GSI+LK RDLK + E E   ESSVEIA+ RG G + E + + KL+E
Sbjct: 141 LGKISAWAEFVGYIGSISLKFRDLKKLSEDEVCLESSVEIAVTRGVGRQEEERRLWKLRE 200

Query: 585 QKLMKKLSVVQDCADGLMAFADIRDGKGLGSSPFFIASAGMLSALISTHKNWLSC 749
           +KLMKKLS+VQD ADGLMA ADIRDG+G  S P  ++ AG+LSALISTHKNW+SC
Sbjct: 201 KKLMKKLSIVQDFADGLMALADIRDGRGQFSGPLLVSCAGLLSALISTHKNWVSC 255


>ref|XP_004152708.1| PREDICTED: peroxisomal membrane protein 11A-like [Cucumis sativus]
          Length = 247

 Score =  325 bits (832), Expect = 2e-86
 Identities = 164/246 (66%), Positives = 196/246 (79%), Gaps = 4/246 (1%)
 Frame = +3

Query: 24  ANKP----CSKERDFLNHLESYLAKRDGVDKLLKISRYASKIILSSSLLQEPHPLSHRLK 191
           A+KP      K+RDF NHLE+YLAKRDGVDKLLKISRY +KIILSSS + E HPL+ RLK
Sbjct: 2   ASKPPPSSTEKQRDFFNHLEAYLAKRDGVDKLLKISRYTTKIILSSSAISESHPLTQRLK 61

Query: 192 SFESSVGISRKAFRLGKFVQDINALRTASFESKQDVLLNLIAYGGEGVYYFVEQFVWLGK 371
           SFESSVG+SRKAFRLGKF+QD+NALR + FES Q+ LL L+AYGGEG YYFVEQF+WL K
Sbjct: 62  SFESSVGVSRKAFRLGKFIQDLNALRNSHFESNQEFLLALLAYGGEGFYYFVEQFIWLAK 121

Query: 372 SGFIDKKNLYTLQKISAWAEFIGYFGSIALKVRDLKSICEAERRCESSVEIAMLRGNGYE 551
           SG IDK++   LQKISAWAE IGY GSI+LK RDL  I E E   ++S+EIA+ RG G+ 
Sbjct: 122 SGLIDKRHSSRLQKISAWAELIGYIGSISLKFRDLNRILEDEACLKASIEIAVNRGIGHR 181

Query: 552 MEVKEIDKLKEQKLMKKLSVVQDCADGLMAFADIRDGKGLGSSPFFIASAGMLSALISTH 731
            E +++ KL+ ++LMKKLS+VQD ADG MA AD+RDG G  S P  I+ AG+LSALISTH
Sbjct: 182 EEEEKMKKLRAKRLMKKLSIVQDFADGFMAVADVRDGNGRFSGPLLISFAGLLSALISTH 241

Query: 732 KNWLSC 749
           KNW+SC
Sbjct: 242 KNWISC 247


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