BLASTX nr result

ID: Coptis23_contig00010792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010792
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322167.1| predicted protein [Populus trichocarpa] gi|2...   117   3e-24
ref|XP_002318651.1| predicted protein [Populus trichocarpa] gi|2...   116   6e-24
ref|XP_004152477.1| PREDICTED: pantothenate kinase 2-like [Cucum...   113   5e-23
ref|XP_002511391.1| Pantothenate kinase, putative [Ricinus commu...   113   5e-23
ref|XP_003576771.1| PREDICTED: pantothenate kinase 2-like [Brach...   111   1e-22

>ref|XP_002322167.1| predicted protein [Populus trichocarpa] gi|222869163|gb|EEF06294.1|
           predicted protein [Populus trichocarpa]
          Length = 872

 Score =  117 bits (292), Expect = 3e-24
 Identities = 62/108 (57%), Positives = 71/108 (65%), Gaps = 16/108 (14%)
 Frame = +3

Query: 39  SKGDAKAMFLWHEGFLGALGAFMSYEKHGLDDLMAHQFVERFPMGAPSEGGKIHGPSPGN 218
           SKG+A+AMFL HEGFLGALGAFMSYEKHGLDDLM HQ VERFPMGAP  GGKIHGP  G+
Sbjct: 369 SKGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGD 428

Query: 219 LSDKASIV----------------INFDSDMLCSLYNIEI*CSRGGTL 314
           L++KAS +                +  D      L   E+  S+GGTL
Sbjct: 429 LNEKASAISWMEKFVQKGTEITAPVPMDPPGTTGLGGFEVPSSKGGTL 476


>ref|XP_002318651.1| predicted protein [Populus trichocarpa] gi|222859324|gb|EEE96871.1|
           predicted protein [Populus trichocarpa]
          Length = 939

 Score =  116 bits (290), Expect = 6e-24
 Identities = 62/108 (57%), Positives = 71/108 (65%), Gaps = 16/108 (14%)
 Frame = +3

Query: 39  SKGDAKAMFLWHEGFLGALGAFMSYEKHGLDDLMAHQFVERFPMGAPSEGGKIHGPSPGN 218
           SKG+A+AMFL HEGFLGALGAFMSYEKHGLDDLM HQ VERFPMGAP  GGKIHGP  G+
Sbjct: 436 SKGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGD 495

Query: 219 LSDKASIV----------------INFDSDMLCSLYNIEI*CSRGGTL 314
           L++KAS +                +   S     L   E+  S+GGTL
Sbjct: 496 LNEKASAISWMEKFVQKGTEITAPVPMASSGTTGLGGFEVPSSKGGTL 543


>ref|XP_004152477.1| PREDICTED: pantothenate kinase 2-like [Cucumis sativus]
           gi|449520489|ref|XP_004167266.1| PREDICTED: pantothenate
           kinase 2-like [Cucumis sativus]
          Length = 911

 Score =  113 bits (282), Expect = 5e-23
 Identities = 53/71 (74%), Positives = 61/71 (85%)
 Frame = +3

Query: 39  SKGDAKAMFLWHEGFLGALGAFMSYEKHGLDDLMAHQFVERFPMGAPSEGGKIHGPSPGN 218
           SKG+A+AMFL HEGFLGALGAFMSYEKHGLDDL+AHQ VERFPMGAP  GGK+HGP  G+
Sbjct: 411 SKGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLLAHQLVERFPMGAPYTGGKVHGPPLGD 470

Query: 219 LSDKASIVINF 251
           L++K S +  F
Sbjct: 471 LNEKISWMEKF 481


>ref|XP_002511391.1| Pantothenate kinase, putative [Ricinus communis]
           gi|223550506|gb|EEF51993.1| Pantothenate kinase,
           putative [Ricinus communis]
          Length = 907

 Score =  113 bits (282), Expect = 5e-23
 Identities = 54/71 (76%), Positives = 60/71 (84%)
 Frame = +3

Query: 39  SKGDAKAMFLWHEGFLGALGAFMSYEKHGLDDLMAHQFVERFPMGAPSEGGKIHGPSPGN 218
           SKG+A+AMFL HEGFLGALGAFMSYEKHGLDDLM HQ VERFPMGAP  GGKIHGP  G+
Sbjct: 407 SKGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGD 466

Query: 219 LSDKASIVINF 251
           L++K S +  F
Sbjct: 467 LNEKISWMEKF 477


>ref|XP_003576771.1| PREDICTED: pantothenate kinase 2-like [Brachypodium distachyon]
          Length = 912

 Score =  111 bits (278), Expect = 1e-22
 Identities = 54/71 (76%), Positives = 59/71 (83%)
 Frame = +3

Query: 39  SKGDAKAMFLWHEGFLGALGAFMSYEKHGLDDLMAHQFVERFPMGAPSEGGKIHGPSPGN 218
           SKG+AKAMFL HEGFLGALGAFMSYEKHGLDDL AH  VERFPMGAP  GGKIHGP  G+
Sbjct: 401 SKGEAKAMFLRHEGFLGALGAFMSYEKHGLDDLSAHHLVERFPMGAPYVGGKIHGPPLGD 460

Query: 219 LSDKASIVINF 251
           L++K S +  F
Sbjct: 461 LNEKISWMEKF 471


Top