BLASTX nr result

ID: Coptis23_contig00010781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010781
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23024.3| unnamed protein product [Vitis vinifera]              151   2e-34
ref|XP_002272297.1| PREDICTED: nephrocystin-3-like [Vitis vinifera]   151   2e-34
ref|XP_002521943.1| kinesin light chain, putative [Ricinus commu...   145   1e-32
ref|XP_002321987.1| predicted protein [Populus trichocarpa] gi|2...   140   4e-31
ref|XP_003523356.1| PREDICTED: nephrocystin-3-like [Glycine max]      135   1e-29

>emb|CBI23024.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score =  151 bits (382), Expect = 2e-34
 Identities = 94/210 (44%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
 Frame = +3

Query: 3   IAGREHEGRXXXXXXXXXXXXYNGNEHPSSVTHLLNLATSYSRSKNFVEAERLQREGLRI 182
           + GR  EGR            Y G +HPSSVTHL+NLATSYSRSKNFVEAERL R  LRI
Sbjct: 363 VVGRGKEGRELLEECLLITEKYKGEDHPSSVTHLINLATSYSRSKNFVEAERLLRTSLRI 422

Query: 183 MEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHERAF 362
           M                                                     I E AF
Sbjct: 423 M-------------MKTMGPDDQSITFPMLHLAVTLYHLKRDEEAEQLTLKALQIREAAF 469

Query: 363 GNKSLIYAEALDCLISIQARIGNDDADVLALLKRVLSIQEKELGYESEEVVTTLKKIVFY 542
           G +SL   EALDCL+SIQ R+G DD+++L LLKRVL IQEKE GYESEEV+ TLKKIVFY
Sbjct: 470 GKESLPVGEALDCLVSIQTRVGKDDSELLDLLKRVLIIQEKEFGYESEEVMITLKKIVFY 529

Query: 543 -XXXXXXXXXXXXQRRLSMLRTKYKKKVHY 629
                        Q+RLS+LR K+K+ + Y
Sbjct: 530 LDKMGRKDEKFPLQKRLSLLRNKHKESIQY 559


>ref|XP_002272297.1| PREDICTED: nephrocystin-3-like [Vitis vinifera]
          Length = 573

 Score =  151 bits (382), Expect = 2e-34
 Identities = 94/210 (44%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
 Frame = +3

Query: 3   IAGREHEGRXXXXXXXXXXXXYNGNEHPSSVTHLLNLATSYSRSKNFVEAERLQREGLRI 182
           + GR  EGR            Y G +HPSSVTHL+NLATSYSRSKNFVEAERL R  LRI
Sbjct: 377 VVGRGKEGRELLEECLLITEKYKGEDHPSSVTHLINLATSYSRSKNFVEAERLLRTSLRI 436

Query: 183 MEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHERAF 362
           M                                                     I E AF
Sbjct: 437 M-------------MKTMGPDDQSITFPMLHLAVTLYHLKRDEEAEQLTLKALQIREAAF 483

Query: 363 GNKSLIYAEALDCLISIQARIGNDDADVLALLKRVLSIQEKELGYESEEVVTTLKKIVFY 542
           G +SL   EALDCL+SIQ R+G DD+++L LLKRVL IQEKE GYESEEV+ TLKKIVFY
Sbjct: 484 GKESLPVGEALDCLVSIQTRVGKDDSELLDLLKRVLIIQEKEFGYESEEVMITLKKIVFY 543

Query: 543 -XXXXXXXXXXXXQRRLSMLRTKYKKKVHY 629
                        Q+RLS+LR K+K+ + Y
Sbjct: 544 LDKMGRKDEKFPLQKRLSLLRNKHKESIQY 573


>ref|XP_002521943.1| kinesin light chain, putative [Ricinus communis]
           gi|223538868|gb|EEF40467.1| kinesin light chain,
           putative [Ricinus communis]
          Length = 505

 Score =  145 bits (366), Expect = 1e-32
 Identities = 94/210 (44%), Positives = 105/210 (50%), Gaps = 1/210 (0%)
 Frame = +3

Query: 3   IAGREHEGRXXXXXXXXXXXXYNGNEHPSSVTHLLNLATSYSRSKNFVEAERLQREGLRI 182
           + GR  EGR            Y G EHPSSV HLLNLATSYS+SKNFVEAERL R  L I
Sbjct: 309 VVGRGKEGRELLEECLLITEEYKGKEHPSSVAHLLNLATSYSQSKNFVEAERLLRISLEI 368

Query: 183 MEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHERAF 362
           M                                                     I E+AF
Sbjct: 369 M-------------MKTVSPEDQSVTFPMLQLAMTLYNLNRDEEAEQLAVEVLRIREKAF 415

Query: 363 GNKSLIYAEALDCLISIQARIGNDDADVLALLKRVLSIQEKELGYESEEVVTTLKKIVFY 542
           G  SL   EALDCL+SIQ R+   D ++L LLKRVL IQEKE GYESEEV+ TLKKIVFY
Sbjct: 416 GKDSLPVGEALDCLVSIQTRLERADTELLELLKRVLKIQEKEFGYESEEVLQTLKKIVFY 475

Query: 543 -XXXXXXXXXXXXQRRLSMLRTKYKKKVHY 629
                        Q+RLS+LRTKYK+ V Y
Sbjct: 476 LAKVGRKDEKFSMQKRLSVLRTKYKQMVRY 505


>ref|XP_002321987.1| predicted protein [Populus trichocarpa] gi|222868983|gb|EEF06114.1|
           predicted protein [Populus trichocarpa]
          Length = 579

 Score =  140 bits (354), Expect = 4e-31
 Identities = 88/210 (41%), Positives = 107/210 (50%), Gaps = 1/210 (0%)
 Frame = +3

Query: 3   IAGREHEGRXXXXXXXXXXXXYNGNEHPSSVTHLLNLATSYSRSKNFVEAERLQREGLRI 182
           + GR +EGR            Y G +HPSSVTHL+NLATSYS+SKN+V+AERL R  L I
Sbjct: 383 VVGRGNEGRELLEECLLITEKYKGKDHPSSVTHLINLATSYSQSKNYVQAERLLRTSLEI 442

Query: 183 MEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHERAF 362
           M                                                     I E+AF
Sbjct: 443 M-------------MKSVRPDDSSITFPMLHLAVTLYRLNQDEEAEQLTLEVLHIREKAF 489

Query: 363 GNKSLIYAEALDCLISIQARIGNDDADVLALLKRVLSIQEKELGYESEEVVTTLKKIVFY 542
           G  SL   EALDCL+SIQ R+G  +A++L LLK+VL IQEKE GYESEEV+ TLKKIVFY
Sbjct: 490 GKDSLPVGEALDCLVSIQTRLGKPEAELLDLLKQVLKIQEKEFGYESEEVMRTLKKIVFY 549

Query: 543 -XXXXXXXXXXXXQRRLSMLRTKYKKKVHY 629
                        Q+RLS+LR KY + + Y
Sbjct: 550 LDKTGRKDEKFSMQKRLSVLRMKYNQMMQY 579


>ref|XP_003523356.1| PREDICTED: nephrocystin-3-like [Glycine max]
          Length = 577

 Score =  135 bits (341), Expect = 1e-29
 Identities = 84/208 (40%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
 Frame = +3

Query: 9   GREHEGRXXXXXXXXXXXXYNGNEHPSSVTHLLNLATSYSRSKNFVEAERLQREGLRIME 188
           GR  EGR            Y G EHPS VTH++NLATSYSRSKN+ +AE L R  L+IM 
Sbjct: 383 GRGQEGRELLEECLWITERYKGKEHPSLVTHMINLATSYSRSKNYADAEHLLRRSLQIM- 441

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHERAFGN 368
                                                               I E+AFG 
Sbjct: 442 ------------IKQKGTDDQSISFPMLHLAVTLYHLKKDEEAEKLALEVLRIREKAFGK 489

Query: 369 KSLIYAEALDCLISIQARIGNDDADVLALLKRVLSIQEKELGYESEEVVTTLKKIVFY-X 545
            SL   EALDCL+SIQ R+G D++++L LL+R+L+IQE+E G ESEEV+ TLKKIV+Y  
Sbjct: 490 NSLPVGEALDCLVSIQTRLGRDESELLELLRRILNIQEREFGRESEEVLVTLKKIVYYLD 549

Query: 546 XXXXXXXXXXXQRRLSMLRTKYKKKVHY 629
                      QRRLS+L  KYK+ V+Y
Sbjct: 550 KLGKKDEKLTLQRRLSVLSKKYKQMVNY 577


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