BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010774
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22109.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26
ref|XP_002533283.1| pentatricopeptide repeat-containing protein,...   106   2e-21
ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20

>emb|CBI22109.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  122 bits (306), Expect = 3e-26
 Identities = 69/147 (46%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
 Frame = +2

Query: 2   SILSKYVNGYQLVVTQASTGDHKVTDGVLSGLIAEEENDPVFYKET-CTAYIERLCRSGN 178
           +ILSK +  YQ + T+AS  +  V D  L+ ++++ E  P F  E  CT YI++L ++GN
Sbjct: 54  AILSKSIGSYQSLATEASPDEEVVPDEFLNEILSDIERSPKFSSEKLCTTYIDKLLKAGN 113

Query: 179 VADAARLLQSLHNKHIFLGPRTYNLLLTVVREGKDFELLSKIFKDALVSCNFLNPLFYPT 358
            + AAR +QSLH+KHIFL P  YNLLL    E    + LS+IFKD LVS   L+   Y  
Sbjct: 114 PSAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAIDFLSQIFKDLLVSNKPLSSTSYFN 173

Query: 359 LAKAFLNSTDSVPLLKFVGEVSEMKCP 439
           +AK F  + DSV LLKFV EVSE+  P
Sbjct: 174 VAKVFTKTDDSV-LLKFVREVSELTFP 199


>ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11900-like [Vitis vinifera]
          Length = 357

 Score =  122 bits (306), Expect = 3e-26
 Identities = 69/147 (46%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
 Frame = +2

Query: 2   SILSKYVNGYQLVVTQASTGDHKVTDGVLSGLIAEEENDPVFYKET-CTAYIERLCRSGN 178
           +ILSK +  YQ + T+AS  +  V D  L+ ++++ E  P F  E  CT YI++L ++GN
Sbjct: 25  AILSKSIGSYQSLATEASPDEEVVPDEFLNEILSDIERSPKFSSEKLCTTYIDKLLKAGN 84

Query: 179 VADAARLLQSLHNKHIFLGPRTYNLLLTVVREGKDFELLSKIFKDALVSCNFLNPLFYPT 358
            + AAR +QSLH+KHIFL P  YNLLL    E    + LS+IFKD LVS   L+   Y  
Sbjct: 85  PSAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAIDFLSQIFKDLLVSNKPLSSTSYFN 144

Query: 359 LAKAFLNSTDSVPLLKFVGEVSEMKCP 439
           +AK F  + DSV LLKFV EVSE+  P
Sbjct: 145 VAKVFTKTDDSV-LLKFVREVSELTFP 170


>ref|XP_002533283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526886|gb|EEF29094.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 405

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/131 (39%), Positives = 82/131 (62%)
 Frame = +2

Query: 47  QASTGDHKVTDGVLSGLIAEEENDPVFYKETCTAYIERLCRSGNVADAARLLQSLHNKHI 226
           +AS  + +V +  L+ ++A  +N P   +E CT Y+ +LC SG++  A RLLQSL N++I
Sbjct: 88  KASLNEDEVAEAYLNIILAAIQNAPSSIEEICTGYLHKLCNSGSLFVAVRLLQSLQNRNI 147

Query: 227 FLGPRTYNLLLTVVREGKDFELLSKIFKDALVSCNFLNPLFYPTLAKAFLNSTDSVPLLK 406
            LGP  YNL++    E    +++S++FKD ++SC  L    +  LA+ F+N+ D V L+K
Sbjct: 148 TLGPNAYNLVMEAAGEANKADIVSRVFKDLMMSCKSLPSSSFINLARGFINTNDHVLLMK 207

Query: 407 FVGEVSEMKCP 439
           FV EV E+  P
Sbjct: 208 FVKEVLELAFP 218


>ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|222847226|gb|EEE84773.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  106 bits (264), Expect = 2e-21
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
 Frame = +2

Query: 8   LSKYVNGYQLVVTQASTGDHKVTDGVLSGLIAEEENDPVFY-KETCTAYIERLCRSGNVA 184
           +++ ++  + + T+ S  + +V D  L+ +I   EN P    ++  TAY+  LC++GN+ 
Sbjct: 21  ITEVIDHCKRLTTRVSFDEGEVKDDNLNQMINAVENAPESATRKIGTAYVHNLCKAGNLF 80

Query: 185 DAARLLQSLHNKHIFLGPRTYNLLLTVVREGKDFELLSKIFKDALVSCNFLNPLFYPTLA 364
            A RLLQSL +K+IFLGP  YN++L    E  D  +LS++FKD +VSC  L    Y  LA
Sbjct: 81  TAVRLLQSLCDKNIFLGPSAYNIILVAASEKNDIAILSQVFKDLIVSCQSLPSTSYLKLA 140

Query: 365 KAFLNSTDSVPLLKFVGEVSEMKCP 439
           + F+ + D V LL+ V EVSEM  P
Sbjct: 141 RGFVKTNDDVQLLRLVKEVSEMTFP 165


>ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|222849680|gb|EEE87227.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/145 (37%), Positives = 86/145 (59%), Gaps = 1/145 (0%)
 Frame = +2

Query: 8   LSKYVNGYQLVVTQASTGDHKVTDGVLSGLIAEEENDP-VFYKETCTAYIERLCRSGNVA 184
           +++ +  Y+ + T+AS    ++ D  L+ ++   EN P    ++  TAY+  LC++G + 
Sbjct: 51  ITEVIGHYKQLTTRASFDGEEIKDDNLNQMLEAVENAPECTTRKVGTAYVHNLCKAGTLF 110

Query: 185 DAARLLQSLHNKHIFLGPRTYNLLLTVVREGKDFELLSKIFKDALVSCNFLNPLFYPTLA 364
            A RLL+ L +K+IFLGP  YN++L    E  D E+LS++FKD ++S   L    Y  LA
Sbjct: 111 AAVRLLRLLRDKNIFLGPSAYNIILVTASEKNDVEILSQVFKDLILSFQSLPSSLYLKLA 170

Query: 365 KAFLNSTDSVPLLKFVGEVSEMKCP 439
           + F+ S D V LL+ V EVSE+  P
Sbjct: 171 RGFVKSNDDVQLLRLVKEVSELTFP 195