BLASTX nr result

ID: Coptis23_contig00010768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010768
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-bin...   298   2e-78
emb|CBI24049.3| unnamed protein product [Vitis vinifera]              298   2e-78
gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera]        291   3e-76
ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus commu...   278   2e-72
ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like pr...   273   5e-71

>ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-binding protein SPL10
           [Vitis vinifera]
          Length = 506

 Score =  298 bits (763), Expect = 2e-78
 Identities = 149/258 (57%), Positives = 180/258 (69%), Gaps = 1/258 (0%)
 Frame = +1

Query: 1   LKLGKRTYFEDVCAGSVVXXXXXXXXXXXXXXXXXXXXXXYHSTQTPRCQVEGCNFDLSS 180
           LKLGKRTYFEDVCA S                        Y S+QTPRCQVEGCN DL S
Sbjct: 133 LKLGKRTYFEDVCAASTAKTTTSSVNPASSVSATKRFRTSYQSSQTPRCQVEGCNLDLKS 192

Query: 181 SKDYHRRHRVCETHSKCPRVVVAGLERRFCQQCSRFHDLMEFDEKKRSCRRRLSDHNARH 360
           +KDYHRRHR+CE HSK P+V+VAGLERRFCQQCSRFH+L EFD+KKRSCRRRL+DHNAR 
Sbjct: 193 AKDYHRRHRICENHSKSPKVIVAGLERRFCQQCSRFHELTEFDDKKRSCRRRLNDHNARR 252

Query: 361 RKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWEATCCIK-PEAKES 537
           R+  P+ IQF+S RL SS YD RQ ++L  NR+P+    PVA P W+  C  K  +   S
Sbjct: 253 RRPHPESIQFSSGRLPSSLYDGRQQINLACNRLPI----PVATPMWQNPCSFKDTQTGGS 308

Query: 538 VMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVLSQGLEAPVTASNLD 717
           ++R VK   I+ +L+L  + +P AI ++H +S+R+LSF GST  VL+QGLEA   ASN +
Sbjct: 309 LIRPVKAVGIDKQLHLPTDEMPDAISMLHGNSERMLSFDGSTPRVLNQGLEASAIASNSN 368

Query: 718 VAPDFRRALSLLSNQPWG 771
           VAPDFRRALSLLS   WG
Sbjct: 369 VAPDFRRALSLLSTNSWG 386


>emb|CBI24049.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  298 bits (763), Expect = 2e-78
 Identities = 149/258 (57%), Positives = 180/258 (69%), Gaps = 1/258 (0%)
 Frame = +1

Query: 1   LKLGKRTYFEDVCAGSVVXXXXXXXXXXXXXXXXXXXXXXYHSTQTPRCQVEGCNFDLSS 180
           LKLGKRTYFEDVCA S                        Y S+QTPRCQVEGCN DL S
Sbjct: 4   LKLGKRTYFEDVCAASTAKTTTSSVNPASSVSATKRFRTSYQSSQTPRCQVEGCNLDLKS 63

Query: 181 SKDYHRRHRVCETHSKCPRVVVAGLERRFCQQCSRFHDLMEFDEKKRSCRRRLSDHNARH 360
           +KDYHRRHR+CE HSK P+V+VAGLERRFCQQCSRFH+L EFD+KKRSCRRRL+DHNAR 
Sbjct: 64  AKDYHRRHRICENHSKSPKVIVAGLERRFCQQCSRFHELTEFDDKKRSCRRRLNDHNARR 123

Query: 361 RKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWEATCCIK-PEAKES 537
           R+  P+ IQF+S RL SS YD RQ ++L  NR+P+    PVA P W+  C  K  +   S
Sbjct: 124 RRPHPESIQFSSGRLPSSLYDGRQQINLACNRLPI----PVATPMWQNPCSFKDTQTGGS 179

Query: 538 VMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVLSQGLEAPVTASNLD 717
           ++R VK   I+ +L+L  + +P AI ++H +S+R+LSF GST  VL+QGLEA   ASN +
Sbjct: 180 LIRPVKAVGIDKQLHLPTDEMPDAISMLHGNSERMLSFDGSTPRVLNQGLEASAIASNSN 239

Query: 718 VAPDFRRALSLLSNQPWG 771
           VAPDFRRALSLLS   WG
Sbjct: 240 VAPDFRRALSLLSTNSWG 257


>gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera]
          Length = 500

 Score =  291 bits (744), Expect = 3e-76
 Identities = 147/258 (56%), Positives = 178/258 (68%), Gaps = 1/258 (0%)
 Frame = +1

Query: 1   LKLGKRTYFEDVCAGSVVXXXXXXXXXXXXXXXXXXXXXXYHSTQTPRCQVEGCNFDLSS 180
           LKLGKR YFEDVCA S                        Y S+QTPRCQVEGCN DL S
Sbjct: 127 LKLGKRPYFEDVCAASTAKTTTSSVNPASSVSATKRFRTSYQSSQTPRCQVEGCNLDLKS 186

Query: 181 SKDYHRRHRVCETHSKCPRVVVAGLERRFCQQCSRFHDLMEFDEKKRSCRRRLSDHNARH 360
           +KDYHRRHR+CE HSK P+V+VAGLERRFCQQCSRFH+L EFD+KKRS RRRL+DHNAR 
Sbjct: 187 AKDYHRRHRICENHSKSPKVIVAGLERRFCQQCSRFHELTEFDDKKRSRRRRLNDHNARR 246

Query: 361 RKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWEATCCIK-PEAKES 537
           R+  P+ IQF+S RL SS YD RQ ++L  NR+P+    PVA P W+  C  K  +   S
Sbjct: 247 RRPHPESIQFSSGRLPSSLYDGRQQINLACNRLPI----PVATPMWQNPCSFKDTQTGGS 302

Query: 538 VMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVLSQGLEAPVTASNLD 717
           ++R VK   I+ +L+L  + +P AI ++H +S+R+LSF GST  VL+QGLEA   ASN +
Sbjct: 303 LIRPVKAVGIDKQLHLPTDEMPDAISMLHVNSERMLSFDGSTPRVLNQGLEASAIASNSN 362

Query: 718 VAPDFRRALSLLSNQPWG 771
           VAPDFRRALSLLS   WG
Sbjct: 363 VAPDFRRALSLLSTNSWG 380


>ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223545956|gb|EEF47459.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 483

 Score =  278 bits (710), Expect = 2e-72
 Identities = 148/261 (56%), Positives = 171/261 (65%), Gaps = 4/261 (1%)
 Frame = +1

Query: 1   LKLGKRTYFEDVCAGS-VVXXXXXXXXXXXXXXXXXXXXXXYHSTQTPRCQVEGCNFDLS 177
           LKLGKRTYFEDVCAGS +                         ++ TPRCQVEGCN DLS
Sbjct: 139 LKLGKRTYFEDVCAGSNIKSSSFSSAIPGSSISPPKRSKSSSQASSTPRCQVEGCNLDLS 198

Query: 178 SSKDYHRRHRVCETHSKCPRVVVAGLERRFCQQCSRFHDLMEFDEKKRSCRRRLSDHNAR 357
           S+KDYHR+HRVCE HSKCP+V+VAGLERRFCQQCSRFH L EFDEKKRSCRRRLSDHNAR
Sbjct: 199 SAKDYHRKHRVCENHSKCPKVIVAGLERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNAR 258

Query: 358 HRKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWEATCCIK-PEAKE 534
            RK QP+ IQ NS RLSSS YD R  MSL++NR PL H R  AN  WE T   K    KE
Sbjct: 259 RRKPQPESIQMNSARLSSSSYDERPHMSLVWNRAPLVHARANANLAWEGTSSSKFTITKE 318

Query: 535 SVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGST--TEVLSQGLEAPVTAS 708
            V++  K+  I+G+L+L  N L ++IPL   +   LL  K      EVL+Q LE  + +S
Sbjct: 319 YVLKPAKIGGIDGQLHLPANELTTSIPLHPHNCKSLLPSKAKVPIAEVLNQDLEESIISS 378

Query: 709 NLDVAPDFRRALSLLSNQPWG 771
           N+D   D  RALSLLS   WG
Sbjct: 379 NVDATQDLHRALSLLSTNSWG 399


>ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like protein 12-like [Vitis
           vinifera]
          Length = 477

 Score =  273 bits (699), Expect = 5e-71
 Identities = 141/257 (54%), Positives = 170/257 (66%)
 Frame = +1

Query: 1   LKLGKRTYFEDVCAGSVVXXXXXXXXXXXXXXXXXXXXXXYHSTQTPRCQVEGCNFDLSS 180
           LKLGKRTYFEDV AG+                          +    RCQVEGCN DLS+
Sbjct: 139 LKLGKRTYFEDVSAGANAKGSVFSVIPISSDTTAKRSRLSCQNAHVSRCQVEGCNLDLST 198

Query: 181 SKDYHRRHRVCETHSKCPRVVVAGLERRFCQQCSRFHDLMEFDEKKRSCRRRLSDHNARH 360
           +KDYHR+HRVCE+H+KCP+V+V GLERRFCQQCSRFH L EFDEKKRSCRRRLSDHNAR 
Sbjct: 199 AKDYHRKHRVCESHTKCPKVIVGGLERRFCQQCSRFHSLSEFDEKKRSCRRRLSDHNARR 258

Query: 361 RKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWEATCCIKPEAKESV 540
           RK QP+GIQ NS RL SSFY  +Q MSL+ + VP+ HTRP  NP+WE TC    + K  +
Sbjct: 259 RKPQPEGIQSNSARL-SSFYGGKQQMSLVLSSVPIVHTRPAVNPSWEGTCSKFTQTK-GL 316

Query: 541 MRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVLSQGLEAPVTASNLDV 720
           +R      I+ +L+L  + L + I  +  DS RLL  KG+  EVL+QGL   + +SNLD 
Sbjct: 317 VRPGNTGGIDRQLHLPGSELQNGISTLCHDSSRLLHSKGAIAEVLNQGLGDSMISSNLDT 376

Query: 721 APDFRRALSLLSNQPWG 771
           + D RRALSLLS   WG
Sbjct: 377 SQDLRRALSLLSTNSWG 393


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