BLASTX nr result
ID: Coptis23_contig00010765
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00010765
(1732 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp... 683 0.0
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm... 627 e-177
ref|XP_002329296.1| predicted protein [Populus trichocarpa] gi|2... 608 e-171
ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron sp... 600 e-169
emb|CBI33632.3| unnamed protein product [Vitis vinifera] 585 e-165
>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Vitis vinifera]
Length = 1184
Score = 683 bits (1762), Expect = 0.0
Identities = 353/548 (64%), Positives = 427/548 (77%), Gaps = 12/548 (2%)
Frame = +3
Query: 3 QAVVDDIKMTWKRNELAMVKFDLPLCRNMDRAREILEIKTRGLVIWSKKDSHVVYRGCNY 182
++VVD I M WK +ELAMVKFD+PLCRNMDRAREILEIKTRGLVIWSKKD+ VVYRG NY
Sbjct: 230 ESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNY 289
Query: 183 ESKPLLDLHSEHACVXXXXXXXXXXXXLLIS--EDDITSS----HRADT----IRISGEE 332
+S H + L S EDD+T S H + T R GEE
Sbjct: 290 QS---TSKHFQKMRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEE 346
Query: 333 DSLLTS--MQRSLDLPSVSGTLFEREADRLLDELGPRYVDWWWPKPLPVDADMLPEVVSG 506
DS T M+ +D V+G+L+EREADRLLD LGPR++DWW PKPLPVDAD+LPEV+ G
Sbjct: 347 DSSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPG 406
Query: 507 FRTPFRRCPPHVRLKLTDDELTYLRKLARPLPTHFALGRNKKLEGLAAAIMKLWEKSLIV 686
FR PFR PP R KLTDDELTYLRKLA LPTHF LGRN+KL+GLAAAI+KLWEKSLIV
Sbjct: 407 FRPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIV 466
Query: 687 KIAVKWGIPNTNSEQMAWELKNLTGGVLILRNKFFIIIYRGKDFLPQATKNLVVDREAEL 866
KIA+KWGIPNT +EQMA ELK LTGGVL+LRNKFFII+YRGKDFLP NL+V+RE E
Sbjct: 467 KIAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEF 526
Query: 867 TRCQVQEEGARLKAIESLSVTNEIVSTMSSVGTLSEFHNFQIKYGHRNNDKDKIDIQTEA 1046
CQ++EE ARLKAIE+ VT++ ++ S+ GTLSEF N + ++ + +I+++ EA
Sbjct: 527 KGCQIREEDARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEA 586
Query: 1047 EKEKLEKEMRKQEHKLVLLKRKIERSARELFKLNSAWRISEQDADQELITEEERNCLRKM 1226
EKE+LEKE++KQE L +LKRKIERSA+ L KLNSAWR ++ DAD+E+ITEEER C RK+
Sbjct: 587 EKERLEKELKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKI 646
Query: 1227 SLKMDKTLVLGRRGVFDGVIGSMHQHWKHREVVKVITMQRSFSQIINTAALLEIESGGIL 1406
KMD +L+LGRRGVFDGVI +HQHWKHRE+VKVITMQRSFSQ++ TA LLE ESGG+L
Sbjct: 647 GQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVL 706
Query: 1407 IAVEKLRSGYAIIVYRGKNYRRPLKLLPENLLTKRAALQRSLQMQRIGSLKFFAYQRQWK 1586
++++KL+ G+AII+YRGKNYRRP+KL+P+NLLTKR AL RSL+MQRIGSLKFFAYQRQ
Sbjct: 707 VSIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQA 766
Query: 1587 IANLKSRL 1610
I++LK +L
Sbjct: 767 ISDLKLKL 774
>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
gi|223544130|gb|EEF45655.1| conserved hypothetical
protein [Ricinus communis]
Length = 742
Score = 627 bits (1617), Expect = e-177
Identities = 329/538 (61%), Positives = 404/538 (75%), Gaps = 2/538 (0%)
Frame = +3
Query: 3 QAVVDDIKMTWKRNELAMVKFDLPLCRNMDRAREILEIKTRGLVIWSKKDSHVVYRGCNY 182
Q+VVD I+ W+ NELAMVKFDLPLCRNMDRAREI+E+KT GLV+W++KDS V+YRGCNY
Sbjct: 226 QSVVDQIRYAWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVWTRKDSLVIYRGCNY 285
Query: 183 ESKPLLDLHSEHACVXXXXXXXXXXXXLLISEDDITSSHRADTIRISGEEDSLLTSMQRS 362
S H ++ I S GEE+ + TS+
Sbjct: 286 HLTK-----SSHVSTM---------------DEKIGSK--------DGEEEYIPTSIFIG 317
Query: 363 LDL--PSVSGTLFEREADRLLDELGPRYVDWWWPKPLPVDADMLPEVVSGFRTPFRRCPP 536
D P+++G+LFERE DRLLD LGPR+VDWW KPLPVDAD+LPEVV+GF P R
Sbjct: 318 DDANTPTINGSLFERETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVAGFMPPSRF--H 375
Query: 537 HVRLKLTDDELTYLRKLARPLPTHFALGRNKKLEGLAAAIMKLWEKSLIVKIAVKWGIPN 716
+ R KL DDELTYLRKLA LPTHF LGRN++L+GLAAAI+KLWE+SLI KIAVKWGIPN
Sbjct: 376 YARAKLKDDELTYLRKLAYALPTHFVLGRNRRLQGLAAAILKLWERSLIAKIAVKWGIPN 435
Query: 717 TNSEQMAWELKNLTGGVLILRNKFFIIIYRGKDFLPQATKNLVVDREAELTRCQVQEEGA 896
T++EQMA ELK+LTGGVL+LRNKFFII++RGKDFLP +LVV RE EL CQ+ EEGA
Sbjct: 436 TDNEQMANELKHLTGGVLLLRNKFFIILFRGKDFLPCQVADLVVKRENELKICQLNEEGA 495
Query: 897 RLKAIESLSVTNEIVSTMSSVGTLSEFHNFQIKYGHRNNDKDKIDIQTEAEKEKLEKEMR 1076
RLKAIE+ +E+V + +GTL+EF + Q+++ +Q EAEKEKLE+E+R
Sbjct: 496 RLKAIETSFTDDELVVKATKIGTLNEFQDIQVRFKELAKGYRDSKLQLEAEKEKLERELR 555
Query: 1077 KQEHKLVLLKRKIERSARELFKLNSAWRISEQDADQELITEEERNCLRKMSLKMDKTLVL 1256
QEHKL++LK KIE+SAREL KLNSAW ++QDAD E++TEEER CLRK+ LKM +L+L
Sbjct: 556 IQEHKLLILKSKIEKSARELSKLNSAWAPADQDADLEMMTEEERECLRKIGLKMRSSLLL 615
Query: 1257 GRRGVFDGVIGSMHQHWKHREVVKVITMQRSFSQIINTAALLEIESGGILIAVEKLRSGY 1436
GRRGVFDGVI +HQHWKHREVVKVI++QR F+Q+I TA LE E+GGIL++++KL+ G+
Sbjct: 616 GRRGVFDGVIEGLHQHWKHREVVKVISLQRMFAQVIRTAKFLEAETGGILVSIDKLKEGH 675
Query: 1437 AIIVYRGKNYRRPLKLLPENLLTKRAALQRSLQMQRIGSLKFFAYQRQWKIANLKSRL 1610
AII+YRGKNYRRP +LL NLLTKR AL RSL+MQRIGSL+FFAYQRQ I LK +L
Sbjct: 676 AIIIYRGKNYRRPQRLL-NNLLTKRKALCRSLEMQRIGSLRFFAYQRQHSIRELKFQL 732
>ref|XP_002329296.1| predicted protein [Populus trichocarpa] gi|222870750|gb|EEF07881.1|
predicted protein [Populus trichocarpa]
Length = 687
Score = 608 bits (1567), Expect = e-171
Identities = 315/550 (57%), Positives = 402/550 (73%), Gaps = 12/550 (2%)
Frame = +3
Query: 3 QAVVDDIKMTWKRNELAMVKFDLPLCRNMDRAREILEIKTRGLVIWSKKDSHVVYRGCNY 182
Q+VVD+I++TW+ +ELAM+KF +PLCRNM+RAR+I+E T GLV+W++KD HVVYRGCNY
Sbjct: 171 QSVVDEIRLTWRTSELAMIKFYMPLCRNMNRARDIVE--TGGLVVWTRKDIHVVYRGCNY 228
Query: 183 ESKPLLDLHSEHACVXXXXXXXXXXXXLLISEDDITSSHRADTIRISGEEDSLLTSMQRS 362
+ K + +++ +
Sbjct: 229 QWKKNFNT----------------------------------------------ATIEEN 242
Query: 363 LDLPSVSGTLFEREADRLLDELGPRYVDWWWPKPLPVDADMLPEVVSGFRTPFRRCPPHV 542
L+ ++G+LFERE DRLLD LGPR+VDWW KPLPVDAD+LPEVV GFR+P R CPP +
Sbjct: 243 LNTQPINGSLFERETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVKGFRSPSRLCPPRM 302
Query: 543 RLKLTDDELTYLRKLARPLPTHFALGRNKKLEGLAAAIMKLWEKSLIVKIAVKWGIPNTN 722
R KL DDELTYLRKLA+ LPTHF LGRN++L+GLAAAI+KLWEK++I KIAVKWG+PNTN
Sbjct: 303 RSKLKDDELTYLRKLAQSLPTHFVLGRNRRLQGLAAAILKLWEKTIIAKIAVKWGVPNTN 362
Query: 723 SEQMAWELK------------NLTGGVLILRNKFFIIIYRGKDFLPQATKNLVVDREAEL 866
+EQMA ELK +LTGGVL+LRNKFFII+YRGKDFLP N++VDRE L
Sbjct: 363 NEQMADELKAKIFLMLMLYTQSLTGGVLLLRNKFFIILYRGKDFLPGQVANVIVDREIAL 422
Query: 867 TRCQVQEEGARLKAIESLSVTNEIVSTMSSVGTLSEFHNFQIKYGHRNNDKDKIDIQTEA 1046
+CQ EEGAR+KAIE+ + +T S GTL EF FQIK+ + K +IQ EA
Sbjct: 423 RKCQTNEEGARMKAIETSYMPGGPTNT-SRCGTLYEFQEFQIKF--QKTAKGDSEIQLEA 479
Query: 1047 EKEKLEKEMRKQEHKLVLLKRKIERSARELFKLNSAWRISEQDADQELITEEERNCLRKM 1226
KEKLE+E+R QE++L +LK KIE+ A++L KLNSAW S +DADQ ++TEEER C RK+
Sbjct: 480 YKEKLERELRNQEYRLRILKSKIEKPAKDLSKLNSAWVPSPRDADQGIMTEEERECFRKI 539
Query: 1227 SLKMDKTLVLGRRGVFDGVIGSMHQHWKHREVVKVITMQRSFSQIINTAALLEIESGGIL 1406
LK+ +LVLGRRGVF+GV+ +HQHWKHREVVKVITMQR FSQ+I+TA LLE ES GIL
Sbjct: 540 GLKLRGSLVLGRRGVFEGVMEGLHQHWKHREVVKVITMQRVFSQVIHTATLLEAESDGIL 599
Query: 1407 IAVEKLRSGYAIIVYRGKNYRRPLKLLPENLLTKRAALQRSLQMQRIGSLKFFAYQRQWK 1586
++V+KL+ G+AII+YRGKNY+RPL+LL +NLLTKR AL+RSL +QR+GSLK+FA QR+
Sbjct: 600 VSVDKLKEGHAIIIYRGKNYKRPLRLLKKNLLTKREALKRSLLIQRVGSLKYFANQRERV 659
Query: 1587 IANLKSRLVF 1616
I++LK +LV+
Sbjct: 660 ISDLKLKLVY 669
>ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Glycine max]
Length = 712
Score = 600 bits (1546), Expect = e-169
Identities = 306/536 (57%), Positives = 394/536 (73%)
Frame = +3
Query: 3 QAVVDDIKMTWKRNELAMVKFDLPLCRNMDRAREILEIKTRGLVIWSKKDSHVVYRGCNY 182
Q VVD IK TW+RNELAM+KFD+PLCRNMDRAREI+E KT GLV+ SKKD VVYRGCN+
Sbjct: 199 QDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNH 258
Query: 183 ESKPLLDLHSEHACVXXXXXXXXXXXXLLISEDDITSSHRADTIRISGEEDSLLTSMQRS 362
S +L+ +++H +DS+ T +Q
Sbjct: 259 HSSEMLNWNADH-------------------------------------KDSISTGIQ-D 280
Query: 363 LDLPSVSGTLFEREADRLLDELGPRYVDWWWPKPLPVDADMLPEVVSGFRTPFRRCPPHV 542
++ V+G+L+ERE +RLLD LGPR++DWW KPLPVDAD+LPE V GF+ PFR CPPH
Sbjct: 281 VNCQLVNGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHS 340
Query: 543 RLKLTDDELTYLRKLARPLPTHFALGRNKKLEGLAAAIMKLWEKSLIVKIAVKWGIPNTN 722
KLTD ELTY RKLA+ LPTHF LGRNK L+GLA+AI+KLWEKSLI KIA+K+GIPNT+
Sbjct: 341 SAKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPNTD 400
Query: 723 SEQMAWELKNLTGGVLILRNKFFIIIYRGKDFLPQATKNLVVDREAELTRCQVQEEGARL 902
+E MA ELK LTGGVL+LRNKF+I++YRG DFLP++ +LV RE EL Q+ EE AR+
Sbjct: 401 NEMMANELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQLHEEVARM 460
Query: 903 KAIESLSVTNEIVSTMSSVGTLSEFHNFQIKYGHRNNDKDKIDIQTEAEKEKLEKEMRKQ 1082
KAI++ S +E+ S+ GTL+EF Q K + +IQ EAE +LEKE++++
Sbjct: 461 KAIQAFSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRLEKELKEE 520
Query: 1083 EHKLVLLKRKIERSARELFKLNSAWRISEQDADQELITEEERNCLRKMSLKMDKTLVLGR 1262
+ + +L +KI+RS REL KLN+AW SEQD D E++T+EER C RK+ LKM +L+LGR
Sbjct: 521 QRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQSSLLLGR 580
Query: 1263 RGVFDGVIGSMHQHWKHREVVKVITMQRSFSQIINTAALLEIESGGILIAVEKLRSGYAI 1442
RG+FDGV+ +HQHWKHREVVKVITMQ+ FSQ+INTA +LE ESGGIL++V+KL+ G+AI
Sbjct: 581 RGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKLKEGHAI 640
Query: 1443 IVYRGKNYRRPLKLLPENLLTKRAALQRSLQMQRIGSLKFFAYQRQWKIANLKSRL 1610
I+YRGKNY+RP L +NLLTKR AL+RSL+MQRIGS+KFFA+QR+ I+ L+ +L
Sbjct: 641 IIYRGKNYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQREQAISELEVKL 696
>emb|CBI33632.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 585 bits (1509), Expect = e-165
Identities = 285/416 (68%), Positives = 349/416 (83%)
Frame = +3
Query: 363 LDLPSVSGTLFEREADRLLDELGPRYVDWWWPKPLPVDADMLPEVVSGFRTPFRRCPPHV 542
+D V+G+L+EREADRLLD LGPR++DWW PKPLPVDAD+LPEV+ GFR PFR PP
Sbjct: 60 VDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQT 119
Query: 543 RLKLTDDELTYLRKLARPLPTHFALGRNKKLEGLAAAIMKLWEKSLIVKIAVKWGIPNTN 722
R KLTDDELTYLRKLA LPTHF LGRN+KL+GLAAAI+KLWEKSLIVKIA+KWGIPNT
Sbjct: 120 RSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTK 179
Query: 723 SEQMAWELKNLTGGVLILRNKFFIIIYRGKDFLPQATKNLVVDREAELTRCQVQEEGARL 902
+EQMA ELK LTGGVL+LRNKFFII+YRGKDFLP NL+V+RE E CQ++EE ARL
Sbjct: 180 NEQMANELKCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQIREEDARL 239
Query: 903 KAIESLSVTNEIVSTMSSVGTLSEFHNFQIKYGHRNNDKDKIDIQTEAEKEKLEKEMRKQ 1082
KAIE+ VT++ ++ S+ GTLSEF N + ++ + +I+++ EAEKE+LEKE++KQ
Sbjct: 240 KAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKELKKQ 299
Query: 1083 EHKLVLLKRKIERSARELFKLNSAWRISEQDADQELITEEERNCLRKMSLKMDKTLVLGR 1262
E L +LKRKIERSA+ L KLNSAWR ++ DAD+E+ITEEER C RK+ KMD +L+LGR
Sbjct: 300 ERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLGR 359
Query: 1263 RGVFDGVIGSMHQHWKHREVVKVITMQRSFSQIINTAALLEIESGGILIAVEKLRSGYAI 1442
RGVFDGVI +HQHWKHRE+VKVITMQRSFSQ++ TA LLE ESGG+L++++KL+ G+AI
Sbjct: 360 RGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAI 419
Query: 1443 IVYRGKNYRRPLKLLPENLLTKRAALQRSLQMQRIGSLKFFAYQRQWKIANLKSRL 1610
I+YRGKNYRRP+KL+P+NLLTKR AL RSL+MQRIGSLKFFAYQRQ I++LK +L
Sbjct: 420 IIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKL 475
Score = 62.4 bits (150), Expect = 4e-07
Identities = 31/57 (54%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +1
Query: 43 MNLPWLNLICHCAGIWIEHEKSLRLRLGDWLFGVRKIVTLFI--EVATTSQNLFWTC 207
MNLPW N C CAGIWIE + LR R WLFGVRK + LFI + + QN+F C
Sbjct: 1 MNLPWSNSTCLCAGIWIERGRFLRSRPEAWLFGVRKTLLLFIGDPIISQLQNIFKRC 57