BLASTX nr result

ID: Coptis23_contig00010758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010758
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31179.3| unnamed protein product [Vitis vinifera]              141   2e-31
ref|XP_002270929.1| PREDICTED: uncharacterized protein LOC100255...   141   2e-31
ref|XP_002530963.1| hypothetical protein RCOM_0845740 [Ricinus c...   138   1e-30
gb|ABK94064.1| unknown [Populus trichocarpa]                          128   1e-27
gb|ADE77493.1| unknown [Picea sitchensis]                             113   6e-23

>emb|CBI31179.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  141 bits (356), Expect = 2e-31
 Identities = 85/179 (47%), Positives = 109/179 (60%), Gaps = 28/179 (15%)
 Frame = -2

Query: 851 LLLKYQTAWKEEASKDQVFPCQRSNIS-TVQNCLPPPSTPLPD----IVMWPRQHHSSTH 687
           L  KYQ  WKE+ S+D+ +P   +++S  V+  +P   TPLP       +WPRQ  S  H
Sbjct: 154 LFQKYQNQWKEDLSRDE-YPLPGAHVSYQVKTNVPLSFTPLPSSETPASLWPRQDDSIAH 212

Query: 686 NNE-------------------PLFLHQLEAP-HNLAILPRLKSMTWTMQNHK---SNRL 576
            N                    P+ L +   P  NL ILPRLKSMTWTM+      +NR+
Sbjct: 213 FNNSDLVSPTPNVVDNNVSCLAPISLQRDVGPLDNLGILPRLKSMTWTMEKRNLAPANRV 272

Query: 575 SIITLKLHDYTKSPSGEREVKFQLTKDTLEAVLRSMTYISKQLSNNGGASSGPLQKKPR 399
           + ++LKL DYTKSP GE EVKFQLT+DTLE +LRSMTYIS+QLSN  G+S+ PLQK+PR
Sbjct: 273 AFVSLKLQDYTKSPLGETEVKFQLTRDTLEGMLRSMTYISEQLSNTVGSSAEPLQKRPR 331


>ref|XP_002270929.1| PREDICTED: uncharacterized protein LOC100255422 [Vitis vinifera]
          Length = 277

 Score =  141 bits (356), Expect = 2e-31
 Identities = 85/179 (47%), Positives = 109/179 (60%), Gaps = 28/179 (15%)
 Frame = -2

Query: 851 LLLKYQTAWKEEASKDQVFPCQRSNIS-TVQNCLPPPSTPLPD----IVMWPRQHHSSTH 687
           L  KYQ  WKE+ S+D+ +P   +++S  V+  +P   TPLP       +WPRQ  S  H
Sbjct: 99  LFQKYQNQWKEDLSRDE-YPLPGAHVSYQVKTNVPLSFTPLPSSETPASLWPRQDDSIAH 157

Query: 686 NNE-------------------PLFLHQLEAP-HNLAILPRLKSMTWTMQNHK---SNRL 576
            N                    P+ L +   P  NL ILPRLKSMTWTM+      +NR+
Sbjct: 158 FNNSDLVSPTPNVVDNNVSCLAPISLQRDVGPLDNLGILPRLKSMTWTMEKRNLAPANRV 217

Query: 575 SIITLKLHDYTKSPSGEREVKFQLTKDTLEAVLRSMTYISKQLSNNGGASSGPLQKKPR 399
           + ++LKL DYTKSP GE EVKFQLT+DTLE +LRSMTYIS+QLSN  G+S+ PLQK+PR
Sbjct: 218 AFVSLKLQDYTKSPLGETEVKFQLTRDTLEGMLRSMTYISEQLSNTVGSSAEPLQKRPR 276


>ref|XP_002530963.1| hypothetical protein RCOM_0845740 [Ricinus communis]
           gi|223529478|gb|EEF31435.1| hypothetical protein
           RCOM_0845740 [Ricinus communis]
          Length = 304

 Score =  138 bits (348), Expect = 1e-30
 Identities = 83/166 (50%), Positives = 104/166 (62%), Gaps = 29/166 (17%)
 Frame = -2

Query: 851 LLLKYQTAWKEEASKDQVFPCQRSNIS-TVQNCLPPPSTPLPDIV-----MWPRQH---- 702
           LL KYQ  WKEE S++Q     R+++S  V+  +PP  T LP +      +WPRQ+    
Sbjct: 100 LLQKYQNQWKEEISREQ-HQLPRTSVSYQVKTSMPPSLTALPSLEISNMPLWPRQNDLNG 158

Query: 701 ---HSSTHNNEPLFL-------------HQLEAPHNLAILPRLKSMTWTMQNHKS---NR 579
              HS    + PL +             H +  P +L +LPRLKSMTWTM+N  S   N+
Sbjct: 159 RFTHSDIGVSTPLVVDNTASYVGPVSIQHDVSPPDDLGVLPRLKSMTWTMENRNSVPANK 218

Query: 578 LSIITLKLHDYTKSPSGEREVKFQLTKDTLEAVLRSMTYISKQLSN 441
           ++IITLKL D+TKSPSGE EVKFQLTKDTLEA+LRSMTYIS QLSN
Sbjct: 219 IAIITLKLQDFTKSPSGEMEVKFQLTKDTLEAMLRSMTYISDQLSN 264


>gb|ABK94064.1| unknown [Populus trichocarpa]
          Length = 274

 Score =  128 bits (322), Expect = 1e-27
 Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 21/172 (12%)
 Frame = -2

Query: 851 LLLKYQTAWKEE--ASKDQVFPCQRSNISTVQNCLPPPSTPLPDIVMWPRQHHSS---TH 687
           LLLKYQ  WK++  A+ +Q     R+++  +    PP  T      +WPRQ  ++    H
Sbjct: 105 LLLKYQIQWKQDDLATTEQ-HSLPRTSVFGISG--PPSFTAEVPTQLWPRQDDTNGRFNH 161

Query: 686 NN--EPLFL-----------HQLEAPHNLAILPRLKSMTWTMQNHK---SNRLSIITLKL 555
           N   EP  +           H + A  N+A +PRLKSMTWT +N     +NR++IITLKL
Sbjct: 162 NGFEEPTSMIAETAASVFAQHHVTALDNMANVPRLKSMTWTAENRNPSSANRVAIITLKL 221

Query: 554 HDYTKSPSGEREVKFQLTKDTLEAVLRSMTYISKQLSNNGGASSGPLQKKPR 399
            DY+KS SGE EVKFQL++DTLEA+LRSMTYI++QLS+  G+SSGP QKK +
Sbjct: 222 QDYSKSSSGETEVKFQLSRDTLEAMLRSMTYINEQLSSRVGSSSGPAQKKQK 273


>gb|ADE77493.1| unknown [Picea sitchensis]
          Length = 278

 Score =  113 bits (282), Expect = 6e-23
 Identities = 72/180 (40%), Positives = 97/180 (53%), Gaps = 30/180 (16%)
 Frame = -2

Query: 851 LLLKYQTAWKEEASKDQV-FPCQRSNISTVQNCLPPPSTPL---PDIVMWPRQHHSSTHN 684
           LL K Q  W+E+ +KDQ  +P +R       +   PPS+P    P   +WPR   +   +
Sbjct: 99  LLQKLQREWREDMAKDQPEWPRKRVVYQVKVSPTMPPSSPAQISPVPPIWPRLEENRRRS 158

Query: 683 N-----------------------EPLFLHQLEAPHNLAILPRLKSMTWTMQNHKS---N 582
           N                       +PL        ++L  LPRLK+MTW+M+N  S   N
Sbjct: 159 NHCELGIPVGMPSGNLNPSRLVPQQPL-QDDSHGDNSLVSLPRLKAMTWSMENQNSTPAN 217

Query: 581 RLSIITLKLHDYTKSPSGEREVKFQLTKDTLEAVLRSMTYISKQLSNNGGASSGPLQKKP 402
           R+++I LKL DYTK  SGE E+KFQL++DTLEA+LRSM YI  QLSN     +GP+ KKP
Sbjct: 218 RVAVINLKLQDYTKPSSGETEIKFQLSRDTLEAMLRSMYYIRDQLSNAAAVQTGPILKKP 277


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