BLASTX nr result
ID: Coptis23_contig00010755
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00010755
(1121 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308505.1| predicted protein [Populus trichocarpa] gi|2... 251 3e-64
ref|NP_001147307.1| protein binding protein [Zea mays] gi|195609... 248 1e-63
ref|XP_002462434.1| hypothetical protein SORBIDRAFT_02g025520 [S... 248 2e-63
ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-... 246 1e-62
ref|XP_003544579.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-... 244 4e-62
>ref|XP_002308505.1| predicted protein [Populus trichocarpa] gi|222854481|gb|EEE92028.1|
predicted protein [Populus trichocarpa]
Length = 307
Score = 251 bits (640), Expect = 3e-64
Identities = 129/279 (46%), Positives = 178/279 (63%), Gaps = 18/279 (6%)
Frame = -2
Query: 1012 RKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQTRYTECELWVAGKELFE 833
+K F +A+SS K+LL +YPSASPSL+++FY +C VA++L+TRY W+AG LF+
Sbjct: 21 KKQKFEDALSSLKSLLRLHYPSASPSLRKTFYSVVCRVATVLKTRYIAPGFWLAGLGLFQ 80
Query: 832 EAERLVVDSSERAYMTTCIEIANEHINK------------------LVMDAIPPRPTLQV 707
EA L DS+E+ ++ CI A EH+++ L +D PPRP V
Sbjct: 81 EALLLTSDSTEKEHLKNCIAQAKEHLDQIENPPDVSQNSGYLFEGHLTVDPEPPRPQWLV 140
Query: 706 ANELLATLGVVPGSSQVMMRGDNNTSQRASELMEEMVNSMGEISEFRNLIDTIEASLQGI 527
+ +L ++ + DNNT + AS L+ E++++ D + + +
Sbjct: 141 QSNILNSMATLQEFESSGRPVDNNTIETASNLLGELMSNF----------DDMIPEIMEM 190
Query: 526 GASRPIRSPPASKEVIENLPVISITEEIMARLGSDMQCVVCKENLDISEKMQELPCKHLF 347
G++ P R PPASKEV+ LPVI+ITEEI+A LG D +C +CKENL +++KMQELPCKH F
Sbjct: 191 GSTAP-RVPPASKEVVAKLPVITITEEILAELGKDAECAICKENLVVNDKMQELPCKHRF 249
Query: 346 HLLCLKPWLDKRNSCPVCRHELPTDDHAYESWKEREREA 230
H CLKPWLD+ NSCP+CRHEL TDDHAYESWKERE+EA
Sbjct: 250 HPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEA 288
>ref|NP_001147307.1| protein binding protein [Zea mays] gi|195609736|gb|ACG26698.1|
protein binding protein [Zea mays]
gi|414589559|tpg|DAA40130.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
gi|414589560|tpg|DAA40131.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 324
Score = 248 bits (634), Expect = 1e-63
Identities = 131/286 (45%), Positives = 176/286 (61%), Gaps = 22/286 (7%)
Frame = -2
Query: 1012 RKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQTRYTECELWVAGKELFE 833
+K F EAV+ A + + Y ASP+L+++ Y +C VA++LQTRYT W G LF
Sbjct: 24 KKQHFEEAVNELAAAVRDRYAGASPALRKAMYSTVCRVATVLQTRYTAPGFWHVGLNLFV 83
Query: 832 EAERLVVDSSERAYMTTCIEIANEHINK----------------------LVMDAIPPRP 719
E+LV + +E+ ++ TCI A EH+++ L + PP P
Sbjct: 84 GIEKLVSNPAEKEHLKTCISRAREHLDEKENEDSVPSNREADTRFLFEGHLTVGQEPPPP 143
Query: 718 TLQVANELLATLGVVPGSSQVMMRGDNNTSQRASELMEEMVNSMGEISEFRNLIDTIEAS 539
VA L L ++ SS +N T RA E+ ++N + IS R+L +E S
Sbjct: 144 AWLVAQNLTRELSILTESSGDQDGSNNRTVPRAEEITPAIMNLLETISGDRDLETALEES 203
Query: 538 LQGIGASRPIRSPPASKEVIENLPVISITEEIMARLGSDMQCVVCKENLDISEKMQELPC 359
LQGI P R+PPASKEV+ NLPVI++TEE+M+RLGS+ +C VC+ENL + +KMQELPC
Sbjct: 204 LQGI-IEYPQRAPPASKEVVANLPVIAVTEEVMSRLGSETECAVCRENLVVDDKMQELPC 262
Query: 358 KHLFHLLCLKPWLDKRNSCPVCRHELPTDDHAYESWKEREREAKSN 221
KHLFH LCLKPWLD+ NSCP+CRHEL TDDH YES KERERE + +
Sbjct: 263 KHLFHPLCLKPWLDENNSCPICRHELRTDDHVYESRKEREREEEED 308
>ref|XP_002462434.1| hypothetical protein SORBIDRAFT_02g025520 [Sorghum bicolor]
gi|241925811|gb|EER98955.1| hypothetical protein
SORBIDRAFT_02g025520 [Sorghum bicolor]
Length = 324
Score = 248 bits (633), Expect = 2e-63
Identities = 131/286 (45%), Positives = 175/286 (61%), Gaps = 22/286 (7%)
Frame = -2
Query: 1012 RKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQTRYTECELWVAGKELFE 833
+K F EAV+ A + + Y ASP+L++S Y +C VA++LQTRYT W AG LF
Sbjct: 24 KKQHFEEAVNELAAAVRDRYAGASPTLRKSMYSTVCRVATVLQTRYTAPGFWRAGLNLFM 83
Query: 832 EAERLVVDSSERAYMTTCIEIANEHINK----------------------LVMDAIPPRP 719
E+LV + +E+ ++ TCI A EH+++ L + PP P
Sbjct: 84 GTEKLVSNPAEKEHLKTCISRAREHLDEKENEDSMPSSREADTRFLFEGHLTVGQEPPPP 143
Query: 718 TLQVANELLATLGVVPGSSQVMMRGDNNTSQRASELMEEMVNSMGEISEFRNLIDTIEAS 539
VA L L ++ SS N T RA E+ ++N + IS R+L +E S
Sbjct: 144 AWLVAQNLTRELSILTESSGDQDGNSNRTVPRAEEITPAIMNLLESISGDRDLETALEES 203
Query: 538 LQGIGASRPIRSPPASKEVIENLPVISITEEIMARLGSDMQCVVCKENLDISEKMQELPC 359
LQGI P R+PPASKEV+ NLPVI++TEE++ARLGS+ +C VC+ENL + +KMQELPC
Sbjct: 204 LQGI-IEHPPRAPPASKEVVANLPVIAVTEEVIARLGSETECAVCRENLVVDDKMQELPC 262
Query: 358 KHLFHLLCLKPWLDKRNSCPVCRHELPTDDHAYESWKEREREAKSN 221
KHLFH CLKPWLD+ NSCP+CRHEL TDDH YES KERE+E + +
Sbjct: 263 KHLFHPPCLKPWLDENNSCPICRHELRTDDHVYESRKEREKEEEED 308
>ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Glycine
max]
Length = 313
Score = 246 bits (627), Expect = 1e-62
Identities = 130/287 (45%), Positives = 177/287 (61%), Gaps = 25/287 (8%)
Frame = -2
Query: 1012 RKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQTRYTECELWVAGKELFE 833
+K F +VSS K LL YPSASP+L++SFY +C VA++L+TRYT W AG LFE
Sbjct: 20 KKQKFEASVSSLKTLLQRTYPSASPALRKSFYSVLCRVATVLKTRYTAPGFWNAGLGLFE 79
Query: 832 EAERLVVDSSERAYMTTCIEIANEHIN------------------------KLVMDAIPP 725
+A LV D SE+ ++ CI A EH++ L +D PP
Sbjct: 80 QAHLLVSDPSEKEHLKACIAQAREHLHLEDNPSQTLRPADNQANRGYLFEGHLTVDPEPP 139
Query: 724 RPTLQVANELLATLGVVPGSSQVMMRGDNNTSQR-ASELMEEMVNSMGEISEFRNLIDTI 548
+P V + LL T + + N T+Q A+ ++E+++N + E+ ++D
Sbjct: 140 QPQWLVQSNLLTTAATLFAAESSQASEANETTQDDATNMLEDLLNRLEEVVPL--MVD-- 195
Query: 547 EASLQGIGASRPIRSPPASKEVIENLPVISITEEIMARLGSDMQCVVCKENLDISEKMQE 368
+G P R+PPASKEV+ NLPVI++TEEI+A LG D +C +C+ENL +++KMQE
Sbjct: 196 ------VGPVAP-RAPPASKEVVANLPVITLTEEILANLGKDAECAICRENLVLNDKMQE 248
Query: 367 LPCKHLFHLLCLKPWLDKRNSCPVCRHELPTDDHAYESWKEREREAK 227
LPCKH FH CLKPWLD+ NSCP+CRHEL TDDHAYESWKERE+EA+
Sbjct: 249 LPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEAE 295
>ref|XP_003544579.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 2 [Glycine
max]
Length = 313
Score = 244 bits (622), Expect = 4e-62
Identities = 129/287 (44%), Positives = 175/287 (60%), Gaps = 25/287 (8%)
Frame = -2
Query: 1012 RKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQTRYTECELWVAGKELFE 833
+K F +VSS K LL YPSASP+L++SFY +C VA++L+TRYT W AG LFE
Sbjct: 20 KKQKFEASVSSLKTLLQRTYPSASPALRKSFYSVLCRVATVLKTRYTAPGFWNAGLGLFE 79
Query: 832 EAERLVVDSSERAYMTTCIEIANEHIN------------------------KLVMDAIPP 725
+A LV D SE+ ++ CI A EH++ L +D PP
Sbjct: 80 QAHLLVSDPSEKEHLKACIAQAREHLHLEDNPSQTLRPADNQANRGYLFEGHLTVDPEPP 139
Query: 724 RPTLQVANELLATLGVVPGSSQVMMRGDNNTSQR-ASELMEEMVNSMGEISEFRNLIDTI 548
+P V + LL T + + N T+Q A+ ++E+++N + E+
Sbjct: 140 QPQWLVQSNLLTTAATLFAAESSQASEANETTQDDATNMLEDLLNRLEEVVPL------- 192
Query: 547 EASLQGIGASRPIRSPPASKEVIENLPVISITEEIMARLGSDMQCVVCKENLDISEKMQE 368
+Q I + R +PPASKEV+ NLPVI++TEEI+A LG D +C +C+ENL +++KMQE
Sbjct: 193 -VFIQNIPSPR---APPASKEVVANLPVITLTEEILANLGKDAECAICRENLVLNDKMQE 248
Query: 367 LPCKHLFHLLCLKPWLDKRNSCPVCRHELPTDDHAYESWKEREREAK 227
LPCKH FH CLKPWLD+ NSCP+CRHEL TDDHAYESWKERE+EA+
Sbjct: 249 LPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEAE 295