BLASTX nr result

ID: Coptis23_contig00010754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010754
         (1348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285411.1| PREDICTED: uncharacterized protein LOC100267...   493   e-137
gb|ABK96555.1| unknown [Populus trichocarpa x Populus deltoides]      490   e-136
ref|XP_002285413.1| PREDICTED: uncharacterized protein LOC100267...   489   e-136
ref|XP_002314075.1| predicted protein [Populus trichocarpa] gi|2...   489   e-136
ref|XP_004154627.1| PREDICTED: uncharacterized LOC101212624 [Cuc...   486   e-135

>ref|XP_002285411.1| PREDICTED: uncharacterized protein LOC100267343 isoform 1 [Vitis
            vinifera] gi|297746307|emb|CBI16363.3| unnamed protein
            product [Vitis vinifera]
          Length = 371

 Score =  493 bits (1270), Expect = e-137
 Identities = 241/355 (67%), Positives = 278/355 (78%), Gaps = 2/355 (0%)
 Frame = +3

Query: 84   RTRRTPGGVQNSSRDLNSDTPPKKQASGKDLFQVFAEKVRDHKEFESRWAVLQETRVEYF 263
            R +R  G +QN  RD NSDTPP+KQA+ KD+FQ+FAEKVRDHK+  SRWAVLQETRVEYF
Sbjct: 11   RVKRQSGSLQNGIRDSNSDTPPRKQAAKKDVFQLFAEKVRDHKDLVSRWAVLQETRVEYF 70

Query: 264  RGKDFVNFVRKHPEFKEVLESDKDLVTEDVADALLRKNLVVRCDRVVKTLRPGKKKLSTW 443
            RGKDFV+F+R HPE KE+LESD++L  ED+A+ LLRKNL+VRCDRVVKT+RPGKKKLSTW
Sbjct: 71   RGKDFVSFLRNHPELKEILESDRNLEVEDIANVLLRKNLLVRCDRVVKTVRPGKKKLSTW 130

Query: 444  PAHLEIFSDQVFSENDAFFAWAFVKRRPLWQTILSFVWPVVTLAICLFPVFPHRCKLIVL 623
            PAHLEIF D +FSENDAFFAW FVKRRPLWQT+LSF WPV+TLAICLFPV+PHRCKL+VL
Sbjct: 131  PAHLEIFPDHLFSENDAFFAWTFVKRRPLWQTLLSFFWPVLTLAICLFPVYPHRCKLLVL 190

Query: 624  YSCAGXXXXXXXXXXXXXXIFGSMWILLGKRVWFFPNILAEEATLSELFQFWPKKDEEER 803
            Y+CAG              IFG++WI+LGKRVWFFPNIL EE TL ELF+F P KDEEER
Sbjct: 191  YTCAGVLLLILSLLLLRLAIFGALWIILGKRVWFFPNILVEEVTLRELFRFLPNKDEEER 250

Query: 804  PKWTARLFFSVVAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPKLALAGMMEKQ 983
            PKWTARL F+V+AVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSP+LAL+GMMEKQ
Sbjct: 251  PKWTARLLFAVLAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPRLALSGMMEKQ 310

Query: 984  --XXXXXXXXXXXXXXXXXXSEEQEVKSDAVIEETKSDLNIGKETSGEEASENQE 1142
                                S E+ V  D    ET SD +   + +G    ++Q+
Sbjct: 311  QPVVDDVTEPTNGFTDGSKASPEEAVSPDGTDGETVSDQHGDGDDAGTRLHDDQQ 365


>gb|ABK96555.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 373

 Score =  490 bits (1262), Expect = e-136
 Identities = 237/362 (65%), Positives = 283/362 (78%), Gaps = 1/362 (0%)
 Frame = +3

Query: 84   RTRRTPGGVQNSSRDLNSDTPPKKQASGKDLFQVFAEKVRDHKEFESRWAVLQETRVEYF 263
            R RR+ G V N+SRDLNSDTPP+KQA+ KD+FQ+FAEKVRDHK+  SRWAVLQETRVEYF
Sbjct: 12   RVRRSSGAVTNASRDLNSDTPPRKQAAKKDVFQLFAEKVRDHKDLVSRWAVLQETRVEYF 71

Query: 264  RGKDFVNFVRKHPEFKEVLESDKDLVTEDVADALLRKNLVVRCDRVVKTLRPGKKKLSTW 443
            RGKDFV+F++ H E K++LES+ +L  E++A+ LL KNL+VRCDRVVKT+RPGKKKLSTW
Sbjct: 72   RGKDFVSFLKNHSEVKDILESNNNLEVEEIANTLLSKNLLVRCDRVVKTVRPGKKKLSTW 131

Query: 444  PAHLEIFSDQVFSENDAFFAWAFVKRRPLWQTILSFVWPVVTLAICLFPVFPHRCKLIVL 623
            PAHLEIF DQVFSENDAFFAWAFVKRRPLWQT+LS  WPV+TLAIC+FPV+PHRCKL++L
Sbjct: 132  PAHLEIFPDQVFSENDAFFAWAFVKRRPLWQTLLSLSWPVLTLAICMFPVYPHRCKLLIL 191

Query: 624  YSCAGXXXXXXXXXXXXXXIFGSMWILLGKRVWFFPNILAEEATLSELFQFWPKKDEEER 803
            YSCAG              +FG ++++LGKRVWFFPNILAEEATL ELF+FWP KDEEER
Sbjct: 192  YSCAGLLLLILSLLSLRATVFGVLYLILGKRVWFFPNILAEEATLGELFRFWPNKDEEER 251

Query: 804  PKWTARLFFSVVAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPKLALAGMMEKQ 983
            PKWT RLF+++VAVL ILLLRHHAPDEAARARYQKR+SNIID+VLEWSP LAL+GMMEKQ
Sbjct: 252  PKWTTRLFYALVAVLVILLLRHHAPDEAARARYQKRMSNIIDEVLEWSPSLALSGMMEKQ 311

Query: 984  XXXXXXXXXXXXXXXXXXSEEQEVKSDAVIEETKSDLNIGKETSG-EEASENQEDVHHHN 1160
                                E+E  +D    ET  + +  +ET   E+  ++Q    H +
Sbjct: 312  PTVVNTTEPSNFTDSGKTDSEKEPPADDEGGETILEQHEDEETENIEDTDQHQHQHQHQD 371

Query: 1161 HI 1166
            HI
Sbjct: 372  HI 373


>ref|XP_002285413.1| PREDICTED: uncharacterized protein LOC100267343 isoform 2 [Vitis
            vinifera]
          Length = 372

 Score =  489 bits (1259), Expect = e-136
 Identities = 241/356 (67%), Positives = 278/356 (78%), Gaps = 3/356 (0%)
 Frame = +3

Query: 84   RTRRTPGGVQNSSRDLNSDTPPKKQASGKDLFQVFAEKVRDHKEFESRWAVLQETRVEYF 263
            R +R  G +QN  RD NSDTPP+KQA+ KD+FQ+FAEKVRDHK+  SRWAVLQETRVEYF
Sbjct: 11   RVKRQSGSLQNGIRDSNSDTPPRKQAAKKDVFQLFAEKVRDHKDLVSRWAVLQETRVEYF 70

Query: 264  RGKDFVNFVRKHPEFKEVLESDKDLVTEDVADALLRKNLVVRCDRVVKTLRPGKKKLSTW 443
            RGKDFV+F+R HPE KE+LESD++L  ED+A+ LLRKNL+VRCDRVVKT+RPGKKKLSTW
Sbjct: 71   RGKDFVSFLRNHPELKEILESDRNLEVEDIANVLLRKNLLVRCDRVVKTVRPGKKKLSTW 130

Query: 444  PAHLEIF-SDQVFSENDAFFAWAFVKRRPLWQTILSFVWPVVTLAICLFPVFPHRCKLIV 620
            PAHLEIF  D +FSENDAFFAW FVKRRPLWQT+LSF WPV+TLAICLFPV+PHRCKL+V
Sbjct: 131  PAHLEIFPDDHLFSENDAFFAWTFVKRRPLWQTLLSFFWPVLTLAICLFPVYPHRCKLLV 190

Query: 621  LYSCAGXXXXXXXXXXXXXXIFGSMWILLGKRVWFFPNILAEEATLSELFQFWPKKDEEE 800
            LY+CAG              IFG++WI+LGKRVWFFPNIL EE TL ELF+F P KDEEE
Sbjct: 191  LYTCAGVLLLILSLLLLRLAIFGALWIILGKRVWFFPNILVEEVTLRELFRFLPNKDEEE 250

Query: 801  RPKWTARLFFSVVAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPKLALAGMMEK 980
            RPKWTARL F+V+AVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSP+LAL+GMMEK
Sbjct: 251  RPKWTARLLFAVLAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPRLALSGMMEK 310

Query: 981  Q--XXXXXXXXXXXXXXXXXXSEEQEVKSDAVIEETKSDLNIGKETSGEEASENQE 1142
            Q                    S E+ V  D    ET SD +   + +G    ++Q+
Sbjct: 311  QQPVVDDVTEPTNGFTDGSKASPEEAVSPDGTDGETVSDQHGDGDDAGTRLHDDQQ 366


>ref|XP_002314075.1| predicted protein [Populus trichocarpa] gi|222850483|gb|EEE88030.1|
            predicted protein [Populus trichocarpa]
          Length = 371

 Score =  489 bits (1258), Expect = e-136
 Identities = 238/360 (66%), Positives = 279/360 (77%)
 Frame = +3

Query: 84   RTRRTPGGVQNSSRDLNSDTPPKKQASGKDLFQVFAEKVRDHKEFESRWAVLQETRVEYF 263
            R RR+ G V N+SRDLNSDTPP+KQA+ KD+FQ+FAEKVRDHK+  SRWAVLQETRVEYF
Sbjct: 12   RVRRSSGAVTNASRDLNSDTPPRKQAAKKDVFQLFAEKVRDHKDLVSRWAVLQETRVEYF 71

Query: 264  RGKDFVNFVRKHPEFKEVLESDKDLVTEDVADALLRKNLVVRCDRVVKTLRPGKKKLSTW 443
            RGKDFV+F++ H E K++LES+ +L  E++A+ LL KNL+VRCDRVVKT+RPGKKKLSTW
Sbjct: 72   RGKDFVSFLKNHSEVKDILESNNNLEVEEIANTLLSKNLLVRCDRVVKTVRPGKKKLSTW 131

Query: 444  PAHLEIFSDQVFSENDAFFAWAFVKRRPLWQTILSFVWPVVTLAICLFPVFPHRCKLIVL 623
            PAHLEIF DQVFSENDAFFAWAFVKRRPLWQT+LS  WPV+TLAIC+FPV+PHRCKL++L
Sbjct: 132  PAHLEIFPDQVFSENDAFFAWAFVKRRPLWQTLLSLSWPVLTLAICMFPVYPHRCKLLIL 191

Query: 624  YSCAGXXXXXXXXXXXXXXIFGSMWILLGKRVWFFPNILAEEATLSELFQFWPKKDEEER 803
            YSCAG              +FG ++++LGKRVWFFPNILAEEATL ELF+FWP KDEEER
Sbjct: 192  YSCAGLLLLILSLLSLRATVFGVLYLILGKRVWFFPNILAEEATLGELFRFWPNKDEEER 251

Query: 804  PKWTARLFFSVVAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPKLALAGMMEKQ 983
            PKWT RLF+++VAVL ILLLRHHAPDEAARARYQKR+SNIID+VLEWSP LAL+GMMEKQ
Sbjct: 252  PKWTTRLFYALVAVLVILLLRHHAPDEAARARYQKRMSNIIDEVLEWSPSLALSGMMEKQ 311

Query: 984  XXXXXXXXXXXXXXXXXXSEEQEVKSDAVIEETKSDLNIGKETSGEEASENQEDVHHHNH 1163
                                E+E  +D    ET        E   +E +EN ED   H H
Sbjct: 312  PTVVNTTEPSNFTDSGKTDSEKEPPADDEGGETI------LEQHEDEETENIEDTDQHQH 365


>ref|XP_004154627.1| PREDICTED: uncharacterized LOC101212624 [Cucumis sativus]
          Length = 364

 Score =  486 bits (1251), Expect = e-135
 Identities = 227/300 (75%), Positives = 262/300 (87%)
 Frame = +3

Query: 84  RTRRTPGGVQNSSRDLNSDTPPKKQASGKDLFQVFAEKVRDHKEFESRWAVLQETRVEYF 263
           R RR    VQN+++D NSDTPP+KQA+ KD+FQ+F+EKVRDHK+ ESRWAVLQETRVEYF
Sbjct: 11  RVRRQSTAVQNAAKDPNSDTPPRKQAAKKDVFQLFSEKVRDHKDLESRWAVLQETRVEYF 70

Query: 264 RGKDFVNFVRKHPEFKEVLESDKDLVTEDVADALLRKNLVVRCDRVVKTLRPGKKKLSTW 443
           RGKDFV+F+R HPE K++L+SDK+L TED+ +ALL KNL+VRCDRVVKT+RPGK+KLSTW
Sbjct: 71  RGKDFVSFLRNHPELKDILDSDKNLETEDIGNALLSKNLLVRCDRVVKTVRPGKRKLSTW 130

Query: 444 PAHLEIFSDQVFSENDAFFAWAFVKRRPLWQTILSFVWPVVTLAICLFPVFPHRCKLIVL 623
           PAHLEIF DQVFSE DAFFAW FVKRRP WQT+LSF WPV+TLAICLFPV+PH+CKL++L
Sbjct: 131 PAHLEIFPDQVFSEQDAFFAWTFVKRRPFWQTLLSFCWPVLTLAICLFPVYPHQCKLLIL 190

Query: 624 YSCAGXXXXXXXXXXXXXXIFGSMWILLGKRVWFFPNILAEEATLSELFQFWPKKDEEER 803
           YSCAG              +FG  +ILLGKR+WFFPNILAEEATL ELF+FWP KDEEE+
Sbjct: 191 YSCAGVLLLILSLLLLRGAVFGLSYILLGKRMWFFPNILAEEATLRELFRFWPSKDEEEK 250

Query: 804 PKWTARLFFSVVAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPKLALAGMMEKQ 983
           PKWT RLF++VVAVL ILLLRHHAPDEAARARYQKRVSNIIDDVLEWSP+LAL+GMMEKQ
Sbjct: 251 PKWTTRLFYAVVAVLIILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPRLALSGMMEKQ 310


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