BLASTX nr result

ID: Coptis23_contig00010730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010730
         (1660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276444.1| PREDICTED: F-box/kelch-repeat protein At3g61...   583   e-164
ref|XP_004133825.1| PREDICTED: F-box/kelch-repeat protein At3g61...   581   e-163
ref|XP_002511947.1| Protein UNUSUAL FLORAL ORGANS, putative [Ric...   580   e-163
gb|ADN34172.1| F-box family protein [Cucumis melo subsp. melo]        568   e-159
ref|XP_002301389.1| predicted protein [Populus trichocarpa] gi|2...   565   e-158

>ref|XP_002276444.1| PREDICTED: F-box/kelch-repeat protein At3g61590 [Vitis vinifera]
            gi|297745382|emb|CBI40462.3| unnamed protein product
            [Vitis vinifera]
          Length = 413

 Score =  583 bits (1503), Expect = e-164
 Identities = 278/396 (70%), Positives = 327/396 (82%), Gaps = 1/396 (0%)
 Frame = +1

Query: 1    EDMQRVVPGFESFSDVTEDAHKEENMGVPLDGILPDELLERILALLPVASVFRVGSVCKR 180
            +D +R +  F SFS++ E+ +KE    V +D ILP++LLERILA LP+AS+ R GSVCKR
Sbjct: 13   DDRRRDIGDFGSFSEIREEVNKEVAT-VSVDLILPNDLLERILAYLPIASILRAGSVCKR 71

Query: 181  WKDIVDERKFLWNSLDSLSQRPWYFMFTSSEEPIGYAYDPILRKWYGIDLPCIEKSSWFV 360
            W +IV  ++FLWN    LSQ+PWYFMFTSS+EP+GYAYDPI RKWY I+LPCI  S+WF+
Sbjct: 72   WHEIVSSKRFLWNKSHILSQKPWYFMFTSSDEPVGYAYDPIFRKWYSIELPCINTSNWFI 131

Query: 361  CTSYGLVCFMDNDNRSRLFICNPINKQFKILEEPPGLKFSDYSALAISVDRKLHNYTIAV 540
             +S GLVCFMD+D+RS L+ICNP+ K+ K LEEPPGLKFSDYSALAISV+R  H+YTI++
Sbjct: 132  TSSSGLVCFMDSDSRSELYICNPVTKRCKRLEEPPGLKFSDYSALAISVNRISHHYTISI 191

Query: 541  VKSKQEPGDFFQWDLSIQLYDSDT-TWKTSYTEVLTGWRGGDESVICDGVLYFLIYSTGG 717
            VKSKQ PG+FFQWDLSI +YDS+T  W T+ TEV+TGWR GDESVICDGVLYFLIYSTGG
Sbjct: 192  VKSKQVPGNFFQWDLSIHIYDSETMIWVTALTEVVTGWRAGDESVICDGVLYFLIYSTGG 251

Query: 718  STNWPETRHRLIRFNLNNWYCPDSLMRTYIPVPFSLTCGRLMNLKDKLVMVGGIGKHERS 897
                PE RH LI +NL +      L+R++IPVP  LTCGRLMNLK KLVMVGGIGKH+R 
Sbjct: 252  GA--PENRHGLIMYNLLSRSSHGLLIRSFIPVPCPLTCGRLMNLKGKLVMVGGIGKHDRP 309

Query: 898  DIIKGIGIWTLNGTEWLEVSRMPHKFFQGFGEFDDVFASSGTADVIYIQSYGSPALLMFD 1077
            DIIKGIGIW LNG EW EV+RMPHKFFQGFGEFDDVFASSGT D+IYIQSYG+P LL FD
Sbjct: 310  DIIKGIGIWVLNGKEWQEVARMPHKFFQGFGEFDDVFASSGTDDLIYIQSYGAPHLLGFD 369

Query: 1078 MNHRQWKWSQKCPVSKKFPLQLFTGFCFEPRLEVLP 1185
            +N +QWKWSQKCPV K+FPLQLFTGFCFEPRLE+ P
Sbjct: 370  INLKQWKWSQKCPVVKRFPLQLFTGFCFEPRLEIAP 405


>ref|XP_004133825.1| PREDICTED: F-box/kelch-repeat protein At3g61590-like [Cucumis
            sativus] gi|449480293|ref|XP_004155853.1| PREDICTED:
            F-box/kelch-repeat protein At3g61590-like [Cucumis
            sativus]
          Length = 405

 Score =  581 bits (1497), Expect = e-163
 Identities = 277/395 (70%), Positives = 323/395 (81%), Gaps = 1/395 (0%)
 Frame = +1

Query: 4    DMQRVVPGFESFSDVTEDAHKEENMGVPLDGILPDELLERILALLPVASVFRVGSVCKRW 183
            DM R +  F+S+ D T +  KE  + V ++ ILPD+LLERIL+ LP+AS+FR GSVCKRW
Sbjct: 14   DMSRDLEDFDSYLDFTNEGGKEA-VAVSVESILPDDLLERILSYLPIASIFRAGSVCKRW 72

Query: 184  KDIVDERKFLWNSLDSLSQRPWYFMFTSSEEPIGYAYDPILRKWYGIDLPCIEKSSWFVC 363
             DIV  R+FLWN    LSQ+PWYFMFTSS++PIGYAYDP+LRKWY IDLPCI+KS+ F+ 
Sbjct: 73   HDIVSSRRFLWNVSHILSQKPWYFMFTSSDDPIGYAYDPVLRKWYAIDLPCIDKSNCFIA 132

Query: 364  TSYGLVCFMDNDNRSRLFICNPINKQFKILEEPPGLKFSDYSALAISVDRKLHNYTIAVV 543
            +S GLVCFMDND+RS L +CNPI K    L EP G KFSDYSALAISV+R  HNYTI+VV
Sbjct: 133  SSCGLVCFMDNDSRSELHVCNPITKCSMKLPEPLGSKFSDYSALAISVNRVSHNYTISVV 192

Query: 544  KSKQEPGDFFQWDLSIQLYDSDT-TWKTSYTEVLTGWRGGDESVICDGVLYFLIYSTGGS 720
            KSKQ PG+FFQWD+SI +YDS+T  W TS TEVLTGWRGGDESVICDGVLYFLIYSTGG 
Sbjct: 193  KSKQVPGNFFQWDISIHIYDSETMMWVTSLTEVLTGWRGGDESVICDGVLYFLIYSTGGG 252

Query: 721  TNWPETRHRLIRFNLNNWYCPDSLMRTYIPVPFSLTCGRLMNLKDKLVMVGGIGKHERSD 900
               P+ RH L+ +N++N      L+R++IP P SLTCGRLMNLK KLVMVGGIGK +R D
Sbjct: 253  A--PDNRHGLVTYNISNHSSHGLLIRSFIPAPCSLTCGRLMNLKQKLVMVGGIGKQDRPD 310

Query: 901  IIKGIGIWTLNGTEWLEVSRMPHKFFQGFGEFDDVFASSGTADVIYIQSYGSPALLMFDM 1080
            IIKGIGIW L G EW E++RMPHKFFQGFGEFDDVFAS GT D++YIQSYG+PALL FDM
Sbjct: 311  IIKGIGIWILCGKEWREIARMPHKFFQGFGEFDDVFASCGTDDLVYIQSYGAPALLTFDM 370

Query: 1081 NHRQWKWSQKCPVSKKFPLQLFTGFCFEPRLEVLP 1185
            N RQW+WSQKCPV+K+FPLQLFTGFCFEPRLE+ P
Sbjct: 371  NLRQWRWSQKCPVTKRFPLQLFTGFCFEPRLEINP 405


>ref|XP_002511947.1| Protein UNUSUAL FLORAL ORGANS, putative [Ricinus communis]
            gi|223549127|gb|EEF50616.1| Protein UNUSUAL FLORAL
            ORGANS, putative [Ricinus communis]
          Length = 405

 Score =  580 bits (1494), Expect = e-163
 Identities = 277/396 (69%), Positives = 329/396 (83%), Gaps = 1/396 (0%)
 Frame = +1

Query: 1    EDMQRVVPGFESFSDVTEDAHKEENMGVPLDGILPDELLERILALLPVASVFRVGSVCKR 180
            +D+ R +  F+SFS+++++ +KE N  + +D ILPD+LLERILA LP+AS+FR GSVCKR
Sbjct: 13   DDVARDIGEFDSFSELSDEGNKEVNT-ISVDLILPDDLLERILAYLPIASIFRAGSVCKR 71

Query: 181  WKDIVDERKFLWNSLDSLSQRPWYFMFTSSEEPIGYAYDPILRKWYGIDLPCIEKSSWFV 360
            W++IV  R+FLWN    L Q+PWYFMFTSS+EP+GYAYDPILRKWYGI+LPCIE S+ F+
Sbjct: 72   WREIVSSRRFLWNFSRVLPQKPWYFMFTSSDEPVGYAYDPILRKWYGINLPCIETSNLFI 131

Query: 361  CTSYGLVCFMDNDNRSRLFICNPINKQFKILEEPPGLKFSDYSALAISVDRKLHNYTIAV 540
             +S GLVCFMD D+RS L++ NPI K  K LEEPPGLK +DYSALAISV+R  H YTI+V
Sbjct: 132  ASSCGLVCFMDKDSRSALYVSNPITKFCKKLEEPPGLKIADYSALAISVNRTSHGYTISV 191

Query: 541  VKSKQEPGDFFQWDLSIQLYDSDT-TWKTSYTEVLTGWRGGDESVICDGVLYFLIYSTGG 717
            VKSKQ PG+FFQWDL I  YDS+T  W TS+TEVLTGWR GDESVICDGVLY LIYSTGG
Sbjct: 192  VKSKQVPGNFFQWDLCIYTYDSETRMWLTSWTEVLTGWRSGDESVICDGVLYVLIYSTGG 251

Query: 718  STNWPETRHRLIRFNLNNWYCPDSLMRTYIPVPFSLTCGRLMNLKDKLVMVGGIGKHERS 897
             T  PE RH LI +NL++      L+R++I VP  LTCGRLMNLK+KLVMVGGIGKH+R 
Sbjct: 252  GT--PENRHGLITYNLSSRSSHGLLIRSFIRVPCPLTCGRLMNLKEKLVMVGGIGKHDRP 309

Query: 898  DIIKGIGIWTLNGTEWLEVSRMPHKFFQGFGEFDDVFASSGTADVIYIQSYGSPALLMFD 1077
            DIIKGIGIW LNG EW E++RMPHKFFQGFGEFDDVFASSGT D+IYIQSYG+PALL+F+
Sbjct: 310  DIIKGIGIWVLNGKEWQEIARMPHKFFQGFGEFDDVFASSGTDDLIYIQSYGAPALLVFN 369

Query: 1078 MNHRQWKWSQKCPVSKKFPLQLFTGFCFEPRLEVLP 1185
               +QWKWSQKCPV+K+FPLQLFTGFCFEPRLE+ P
Sbjct: 370  TKQKQWKWSQKCPVTKRFPLQLFTGFCFEPRLEIEP 405


>gb|ADN34172.1| F-box family protein [Cucumis melo subsp. melo]
          Length = 405

 Score =  568 bits (1465), Expect = e-159
 Identities = 274/395 (69%), Positives = 318/395 (80%), Gaps = 1/395 (0%)
 Frame = +1

Query: 4    DMQRVVPGFESFSDVTEDAHKEENMGVPLDGILPDELLERILALLPVASVFRVGSVCKRW 183
            DM R +  F+S+ D T +   EE + V ++ ILPD+LLERIL+ LP+AS+FR GSVCKRW
Sbjct: 14   DMSRDLEDFDSYLDFTNEGG-EEAVAVSVESILPDDLLERILSYLPIASIFRAGSVCKRW 72

Query: 184  KDIVDERKFLWNSLDSLSQRPWYFMFTSSEEPIGYAYDPILRKWYGIDLPCIEKSSWFVC 363
             DIV  R+FLWN    LSQ+PWYFMFTSS+EPIGYAYDP+LRKWY IDLPCI+KS+  + 
Sbjct: 73   HDIVSSRRFLWNVSHILSQKPWYFMFTSSDEPIGYAYDPVLRKWYAIDLPCIDKSNCDIA 132

Query: 364  TSYGLVCFMDNDNRSRLFICNPINKQFKILEEPPGLKFSDYSALAISVDRKLHNYTIAVV 543
            +S GLVCFMD D+RS L +CNPI K    L EP G K SDYSALAISV+R  HNYTI+VV
Sbjct: 133  SSCGLVCFMDKDSRSELHVCNPITKCSMRLPEPLGSKSSDYSALAISVNRVSHNYTISVV 192

Query: 544  KSKQEPGDFFQWDLSIQLYDSD-TTWKTSYTEVLTGWRGGDESVICDGVLYFLIYSTGGS 720
            KSKQ PG+FFQWD+SI +YDS+   W TS TEVLTGWRGGDESVICDGVLYFLIYSTGG 
Sbjct: 193  KSKQVPGNFFQWDISIHIYDSEKMMWVTSLTEVLTGWRGGDESVICDGVLYFLIYSTGGG 252

Query: 721  TNWPETRHRLIRFNLNNWYCPDSLMRTYIPVPFSLTCGRLMNLKDKLVMVGGIGKHERSD 900
               P+ RH L+ +N++N      L+R++IP P SLTCGRLMNLK KLVMVGGIGK +R D
Sbjct: 253  A--PDNRHGLVTYNISNHSSHGLLIRSFIPAPCSLTCGRLMNLKQKLVMVGGIGKPDRPD 310

Query: 901  IIKGIGIWTLNGTEWLEVSRMPHKFFQGFGEFDDVFASSGTADVIYIQSYGSPALLMFDM 1080
            IIKGIGIW L G EW E++RMPHKFFQGFGEFDDVF S GT D+IYIQSYG+PALL FDM
Sbjct: 311  IIKGIGIWILCGKEWREIARMPHKFFQGFGEFDDVFGSCGTDDLIYIQSYGAPALLTFDM 370

Query: 1081 NHRQWKWSQKCPVSKKFPLQLFTGFCFEPRLEVLP 1185
            N RQW+WSQKCPV+K+FPLQLFTGFCFEPRLE+ P
Sbjct: 371  NLRQWRWSQKCPVTKRFPLQLFTGFCFEPRLEINP 405


>ref|XP_002301389.1| predicted protein [Populus trichocarpa] gi|222843115|gb|EEE80662.1|
            predicted protein [Populus trichocarpa]
          Length = 405

 Score =  565 bits (1457), Expect = e-158
 Identities = 270/396 (68%), Positives = 321/396 (81%), Gaps = 1/396 (0%)
 Frame = +1

Query: 1    EDMQRVVPGFESFSDVTEDAHKEENMGVPLDGILPDELLERILALLPVASVFRVGSVCKR 180
            ED  R +  F+SFS+++++  KE N  V +D ILPD+LLERILA LPVAS+FR G VCKR
Sbjct: 13   EDSTRGIGEFDSFSELSDEGSKEVN-AVSVDLILPDDLLERILACLPVASIFRAGCVCKR 71

Query: 181  WKDIVDERKFLWNSLDSLSQRPWYFMFTSSEEPIGYAYDPILRKWYGIDLPCIEKSSWFV 360
            W +IV  R+FLWN    L Q+PWYFMFTSS+EP+GYA+DP+LRKWYGIDLP I+ S+WF+
Sbjct: 72   WHEIVSSRRFLWNFSHVLPQKPWYFMFTSSDEPVGYAFDPVLRKWYGIDLPRIKTSNWFI 131

Query: 361  CTSYGLVCFMDNDNRSRLFICNPINKQFKILEEPPGLKFSDYSALAISVDRKLHNYTIAV 540
             +S GLV FMDND RS L++CNPI K  + L+E PGLKF DYSALAISV+R  H YTI++
Sbjct: 132  ASSCGLVSFMDNDTRSELYVCNPITKHCRKLQESPGLKFPDYSALAISVNRISHGYTISI 191

Query: 541  VKSKQEPGDFFQWDLSIQLYDSDT-TWKTSYTEVLTGWRGGDESVICDGVLYFLIYSTGG 717
            VKSKQ PG+FFQWDLSI +YDSDT  W TS TEVLTGWRGGDESVIC G LY LIYS GG
Sbjct: 192  VKSKQVPGNFFQWDLSIHIYDSDTRMWVTSCTEVLTGWRGGDESVICGGFLYVLIYSAGG 251

Query: 718  STNWPETRHRLIRFNLNNWYCPDSLMRTYIPVPFSLTCGRLMNLKDKLVMVGGIGKHERS 897
             +  PETRH LI +NL++      L+R++I VP  LTCGRLMNL +KLVMVGGIGK +R 
Sbjct: 252  GS--PETRHGLITYNLSSRSSNGLLIRSFIKVPCPLTCGRLMNLNEKLVMVGGIGKQDRP 309

Query: 898  DIIKGIGIWTLNGTEWLEVSRMPHKFFQGFGEFDDVFASSGTADVIYIQSYGSPALLMFD 1077
            DIIKGIGIW LNG +W E++RMPHK FQGFGE DDVFASSGT ++IYIQSYG+PALL+FD
Sbjct: 310  DIIKGIGIWVLNGKDWQEIARMPHKCFQGFGELDDVFASSGTDNLIYIQSYGAPALLVFD 369

Query: 1078 MNHRQWKWSQKCPVSKKFPLQLFTGFCFEPRLEVLP 1185
             N +QWKWSQKCPV+K+FPLQLFTGFCFEPR+E+ P
Sbjct: 370  FNQKQWKWSQKCPVTKRFPLQLFTGFCFEPRIEMAP 405


Top