BLASTX nr result

ID: Coptis23_contig00010719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010719
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278442.1| PREDICTED: secretory carrier-associated memb...   390   e-106
ref|XP_002886310.1| secretory carrier membrane protein family pr...   383   e-104
ref|NP_179680.1| secretory carrier-associated membrane protein 1...   383   e-104
ref|XP_003527449.1| PREDICTED: secretory carrier-associated memb...   382   e-104
ref|XP_003527448.1| PREDICTED: secretory carrier-associated memb...   382   e-104

>ref|XP_002278442.1| PREDICTED: secretory carrier-associated membrane protein 3 [Vitis
           vinifera] gi|297739263|emb|CBI28914.3| unnamed protein
           product [Vitis vinifera]
          Length = 285

 Score =  390 bits (1002), Expect = e-106
 Identities = 201/301 (66%), Positives = 219/301 (72%)
 Frame = +3

Query: 3   LSPLPPEPAGYNNYDRAATVDIPLDSSKDIXXXXXXXXXXXXXXXXREQELKRREDAVAR 182
           LSPLPPEPAGY    R ATVDIPLD +KD                 REQELKRREDAVAR
Sbjct: 32  LSPLPPEPAGY----RGATVDIPLDGAKDTKAKERELQAKEAELKKREQELKRREDAVAR 87

Query: 183 AGIVIEDKNWPPFFPIIHHDIANEIPIHLQKMQYVAFTTWLGLVVCLLWNIIAVTTAWIK 362
           AGIVIE+KNWPPFFP+IHHDIANEIPIH QK+QYVAFTT+LGLV+CL WNI+AVTTAWIK
Sbjct: 88  AGIVIEEKNWPPFFPLIHHDIANEIPIHQQKLQYVAFTTYLGLVLCLTWNIVAVTTAWIK 147

Query: 363 GEGVTIWFLAIIYFISGVPGGYVLWYRPLYRAMRXXXXXXXXXXXXXXXXXXXXXXXXXX 542
           GEG TIWFLAIIYF+SGVPG YVLWYRPLYRAM                           
Sbjct: 148 GEGPTIWFLAIIYFLSGVPGAYVLWYRPLYRAM--------------------------- 180

Query: 543 XXRTDSALKFGWFFLFYLLHIGFCIFAAVAPPIIFKGKSLTGILPAIDVLSGNALVGIFY 722
             RTDSALKFGWFFLFYLLHI FCIFA+VAPPI+FKGKSLTGILPA+D+LS +ALVGI  
Sbjct: 181 --RTDSALKFGWFFLFYLLHIAFCIFASVAPPIVFKGKSLTGILPAVDLLSKHALVGI-- 236

Query: 723 LIGXXXXXXXXXXXXXXXXXIFYLIGFGLFCLESVISIWVIQQVYMYFRGSGKAAEMRRD 902
                                FYLIGFGLFCLES++SIWV+QQVYMYFRGSGKA E++RD
Sbjct: 237 ---------------------FYLIGFGLFCLESLLSIWVVQQVYMYFRGSGKAQEIKRD 275

Query: 903 A 905
           A
Sbjct: 276 A 276


>ref|XP_002886310.1| secretory carrier membrane protein family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297332150|gb|EFH62569.1|
           secretory carrier membrane protein family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 282

 Score =  383 bits (984), Expect = e-104
 Identities = 196/301 (65%), Positives = 216/301 (71%)
 Frame = +3

Query: 3   LSPLPPEPAGYNNYDRAATVDIPLDSSKDIXXXXXXXXXXXXXXXXREQELKRREDAVAR 182
           LSPLPPEP     YDR AT+DIPLDS KD+                REQE+KR+EDA+A+
Sbjct: 30  LSPLPPEP-----YDRGATMDIPLDSGKDLKAKEKELREKEAELKRREQEIKRKEDAIAQ 84

Query: 183 AGIVIEDKNWPPFFPIIHHDIANEIPIHLQKMQYVAFTTWLGLVVCLLWNIIAVTTAWIK 362
           AGIVIE+KNWPPFFP+IHHDI+NEIPIHLQ++QYVAFT+ LGLVVCLLWNI+AVTTAWIK
Sbjct: 85  AGIVIEEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAVTTAWIK 144

Query: 363 GEGVTIWFLAIIYFISGVPGGYVLWYRPLYRAMRXXXXXXXXXXXXXXXXXXXXXXXXXX 542
           GEG TIWFLAIIYFISGVPG YV+WYRPLYRAM                           
Sbjct: 145 GEGPTIWFLAIIYFISGVPGAYVMWYRPLYRAM--------------------------- 177

Query: 543 XXRTDSALKFGWFFLFYLLHIGFCIFAAVAPPIIFKGKSLTGILPAIDVLSGNALVGIFY 722
             RTDSALKFGWFF  YL HI FC+FAAVAPPIIFKGKSLTGILPAIDVLSGN LVG   
Sbjct: 178 --RTDSALKFGWFFFTYLFHIAFCVFAAVAPPIIFKGKSLTGILPAIDVLSGNILVG--- 232

Query: 723 LIGXXXXXXXXXXXXXXXXXIFYLIGFGLFCLESVISIWVIQQVYMYFRGSGKAAEMRRD 902
                               IFY IGFG FCLES++SIWVIQQVYMYFRGSGKAAEM+++
Sbjct: 233 --------------------IFYFIGFGFFCLESLVSIWVIQQVYMYFRGSGKAAEMKQE 272

Query: 903 A 905
           A
Sbjct: 273 A 273


>ref|NP_179680.1| secretory carrier-associated membrane protein 1 [Arabidopsis
           thaliana] gi|75206548|sp|Q9SKT3.1|SCAM1_ARATH RecName:
           Full=Secretory carrier-associated membrane protein 1;
           Short=AtSC1; Short=Secretory carrier membrane protein 1
           gi|4454464|gb|AAD20911.1| putative secretory
           carrier-associated membrane protein [Arabidopsis
           thaliana] gi|46931314|gb|AAT06461.1| At2g20840
           [Arabidopsis thaliana] gi|62320793|dbj|BAD93720.1|
           putative secretory carrier-associated membrane protein
           [Arabidopsis thaliana] gi|330251992|gb|AEC07086.1|
           secretory carrier-associated membrane protein 1
           [Arabidopsis thaliana]
          Length = 282

 Score =  383 bits (984), Expect = e-104
 Identities = 196/301 (65%), Positives = 216/301 (71%)
 Frame = +3

Query: 3   LSPLPPEPAGYNNYDRAATVDIPLDSSKDIXXXXXXXXXXXXXXXXREQELKRREDAVAR 182
           LSPLPPEP     YDR AT+DIPLDS KD+                REQE+KR+EDA+A+
Sbjct: 30  LSPLPPEP-----YDRGATMDIPLDSGKDLKAKEKELREKEAELKRREQEIKRKEDAIAQ 84

Query: 183 AGIVIEDKNWPPFFPIIHHDIANEIPIHLQKMQYVAFTTWLGLVVCLLWNIIAVTTAWIK 362
           AGIVIE+KNWPPFFP+IHHDI+NEIPIHLQ++QYVAFT+ LGLVVCLLWNI+AVTTAWIK
Sbjct: 85  AGIVIEEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAVTTAWIK 144

Query: 363 GEGVTIWFLAIIYFISGVPGGYVLWYRPLYRAMRXXXXXXXXXXXXXXXXXXXXXXXXXX 542
           GEG TIWFLAIIYFISGVPG YV+WYRPLYRAM                           
Sbjct: 145 GEGPTIWFLAIIYFISGVPGAYVMWYRPLYRAM--------------------------- 177

Query: 543 XXRTDSALKFGWFFLFYLLHIGFCIFAAVAPPIIFKGKSLTGILPAIDVLSGNALVGIFY 722
             RTDSALKFGWFF  YL HI FC+FAAVAPPIIFKGKSLTGILPAIDVLSGN LVG   
Sbjct: 178 --RTDSALKFGWFFFTYLFHIAFCVFAAVAPPIIFKGKSLTGILPAIDVLSGNILVG--- 232

Query: 723 LIGXXXXXXXXXXXXXXXXXIFYLIGFGLFCLESVISIWVIQQVYMYFRGSGKAAEMRRD 902
                               IFY IGFG FCLES++SIWVIQQVYMYFRGSGKAAEM+++
Sbjct: 233 --------------------IFYFIGFGFFCLESLVSIWVIQQVYMYFRGSGKAAEMKQE 272

Query: 903 A 905
           A
Sbjct: 273 A 273


>ref|XP_003527449.1| PREDICTED: secretory carrier-associated membrane protein 1-like
           isoform 2 [Glycine max]
          Length = 284

 Score =  382 bits (982), Expect = e-104
 Identities = 197/301 (65%), Positives = 214/301 (71%)
 Frame = +3

Query: 3   LSPLPPEPAGYNNYDRAATVDIPLDSSKDIXXXXXXXXXXXXXXXXREQELKRREDAVAR 182
           LSPLPPEP     YDR AT+DIPL+++KD                 REQELKRREDA+AR
Sbjct: 32  LSPLPPEP-----YDRGATIDIPLNNAKDAKAKEKELQAKEAELKRREQELKRREDAIAR 86

Query: 183 AGIVIEDKNWPPFFPIIHHDIANEIPIHLQKMQYVAFTTWLGLVVCLLWNIIAVTTAWIK 362
           AGIVIE+KNWPPFFPIIHHDIA EIP+HLQ++QY+AFTTWLGLV+CLLWNI+AVTTAWIK
Sbjct: 87  AGIVIEEKNWPPFFPIIHHDIAKEIPVHLQRIQYIAFTTWLGLVLCLLWNIVAVTTAWIK 146

Query: 363 GEGVTIWFLAIIYFISGVPGGYVLWYRPLYRAMRXXXXXXXXXXXXXXXXXXXXXXXXXX 542
           GEG TIWFLAIIYFISG PG YVLWYRPLYRAM                           
Sbjct: 147 GEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAM--------------------------- 179

Query: 543 XXRTDSALKFGWFFLFYLLHIGFCIFAAVAPPIIFKGKSLTGILPAIDVLSGNALVGIFY 722
             RTDSALKFGWFFL Y+LHI FCI AAVAPPIIFKGKSLTGIL AIDVL  NALVG   
Sbjct: 180 --RTDSALKFGWFFLLYMLHIAFCILAAVAPPIIFKGKSLTGILAAIDVLGDNALVG--- 234

Query: 723 LIGXXXXXXXXXXXXXXXXXIFYLIGFGLFCLESVISIWVIQQVYMYFRGSGKAAEMRRD 902
                               IFY IGFGLFCLESV+SIWVIQQVYMYFRGSGKAA ++R+
Sbjct: 235 --------------------IFYFIGFGLFCLESVLSIWVIQQVYMYFRGSGKAAVLKRE 274

Query: 903 A 905
           A
Sbjct: 275 A 275


>ref|XP_003527448.1| PREDICTED: secretory carrier-associated membrane protein 1-like
           isoform 1 [Glycine max]
          Length = 306

 Score =  382 bits (982), Expect = e-104
 Identities = 197/301 (65%), Positives = 214/301 (71%)
 Frame = +3

Query: 3   LSPLPPEPAGYNNYDRAATVDIPLDSSKDIXXXXXXXXXXXXXXXXREQELKRREDAVAR 182
           LSPLPPEP     YDR AT+DIPL+++KD                 REQELKRREDA+AR
Sbjct: 54  LSPLPPEP-----YDRGATIDIPLNNAKDAKAKEKELQAKEAELKRREQELKRREDAIAR 108

Query: 183 AGIVIEDKNWPPFFPIIHHDIANEIPIHLQKMQYVAFTTWLGLVVCLLWNIIAVTTAWIK 362
           AGIVIE+KNWPPFFPIIHHDIA EIP+HLQ++QY+AFTTWLGLV+CLLWNI+AVTTAWIK
Sbjct: 109 AGIVIEEKNWPPFFPIIHHDIAKEIPVHLQRIQYIAFTTWLGLVLCLLWNIVAVTTAWIK 168

Query: 363 GEGVTIWFLAIIYFISGVPGGYVLWYRPLYRAMRXXXXXXXXXXXXXXXXXXXXXXXXXX 542
           GEG TIWFLAIIYFISG PG YVLWYRPLYRAM                           
Sbjct: 169 GEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAM--------------------------- 201

Query: 543 XXRTDSALKFGWFFLFYLLHIGFCIFAAVAPPIIFKGKSLTGILPAIDVLSGNALVGIFY 722
             RTDSALKFGWFFL Y+LHI FCI AAVAPPIIFKGKSLTGIL AIDVL  NALVG   
Sbjct: 202 --RTDSALKFGWFFLLYMLHIAFCILAAVAPPIIFKGKSLTGILAAIDVLGDNALVG--- 256

Query: 723 LIGXXXXXXXXXXXXXXXXXIFYLIGFGLFCLESVISIWVIQQVYMYFRGSGKAAEMRRD 902
                               IFY IGFGLFCLESV+SIWVIQQVYMYFRGSGKAA ++R+
Sbjct: 257 --------------------IFYFIGFGLFCLESVLSIWVIQQVYMYFRGSGKAAVLKRE 296

Query: 903 A 905
           A
Sbjct: 297 A 297


Top