BLASTX nr result

ID: Coptis23_contig00010717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010717
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...   731   0.0  
ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...   719   0.0  
ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like...   713   0.0  
ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like...   712   0.0  
emb|CBI29756.3| unnamed protein product [Vitis vinifera]              711   0.0  

>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
            [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
            PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
            partial [Cucumis sativus]
          Length = 1269

 Score =  731 bits (1887), Expect = 0.0
 Identities = 353/429 (82%), Positives = 382/429 (89%)
 Frame = +2

Query: 2    LICGGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWSEQQEIFRELSSENCKYKLL 181
            LIC G+TLVISPLVSLIQDQIMHL+QANI AAYLSANMEWSEQQEIFR+LSS+  KYKLL
Sbjct: 554  LICPGVTLVISPLVSLIQDQIMHLIQANISAAYLSANMEWSEQQEIFRDLSSDCSKYKLL 613

Query: 182  YVTPEKVAKSDVLLRHLESLNARDLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPN 361
            YVTPEKVAKSDVLLRHLESLNAR LL+RIVIDEAHCVSQWGHDFRPDYQ LGILKQKFP 
Sbjct: 614  YVTPEKVAKSDVLLRHLESLNARHLLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPK 673

Query: 362  TPVXXXXXXXXXSVKEDVVRALGLVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKE 541
             PV         SVKEDVV+ALGL+NCIIFRQSFNRPNL YSVIPKTK C+DDIDKF+KE
Sbjct: 674  IPVLALTATATASVKEDVVQALGLINCIIFRQSFNRPNLWYSVIPKTKKCVDDIDKFIKE 733

Query: 542  NHFDECGIIYCLSRMDCEKVAEKLQECGHKASFYHGSMDPQQRTFVQKQWSKDEINIICA 721
            NHFDECGI+YCLSRMDCEKVAE+LQECGHKA+FYHGSMDP QR+F+QKQWSKDEINIICA
Sbjct: 734  NHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDPAQRSFIQKQWSKDEINIICA 793

Query: 722  TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMI 901
            TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDG RSSCVLYY Y DYIRVKHMI
Sbjct: 794  TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCVLYYSYSDYIRVKHMI 853

Query: 902  SQGALEQSSFASGSRRFSLANSDRALETNIENLLRMVSYCENDVDCRRLLQLIHFGEKFS 1081
            SQGA EQS   SG  R +L +S R LETN ENLLRMVSYCENDVDCRRLLQL+HFGEKF 
Sbjct: 854  SQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFD 913

Query: 1082 PLNCSRTCDNCAKDSHCTEKDVTDTAKQLVELVRTAGQQNSSSHILDVYKGSMNQNVKKY 1261
            P NC +TCDNC K ++  EKDVTD +KQLV+LVR+ GQQ SS+HIL+VY+GS++Q VKK+
Sbjct: 914  PGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQFSSAHILEVYRGSLSQFVKKH 973

Query: 1262 RHNSLSLHG 1288
            RH  LSLHG
Sbjct: 974  RHEKLSLHG 982


>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
            gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
            [Ricinus communis]
          Length = 1233

 Score =  719 bits (1855), Expect = 0.0
 Identities = 349/429 (81%), Positives = 378/429 (88%)
 Frame = +2

Query: 2    LICGGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWSEQQEIFRELSSENCKYKLL 181
            L+C GITLVISPLVSLIQDQIMHLLQANI AAYLSANMEW+EQQEI RELSS+ CKYKLL
Sbjct: 496  LVCPGITLVISPLVSLIQDQIMHLLQANISAAYLSANMEWAEQQEILRELSSDYCKYKLL 555

Query: 182  YVTPEKVAKSDVLLRHLESLNARDLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPN 361
            YVTPEKVAKSDVLLR+LESLNAR LL+RIVIDEAHCVSQWGHDFRPDY+ LGILK+KF  
Sbjct: 556  YVTPEKVAKSDVLLRNLESLNARGLLARIVIDEAHCVSQWGHDFRPDYKELGILKKKFEK 615

Query: 362  TPVXXXXXXXXXSVKEDVVRALGLVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKE 541
            TPV         SVKEDVV+ALGLV+CIIFRQSFNRPNL YSV+PKTK CLDDIDKF+KE
Sbjct: 616  TPVLALTATATASVKEDVVQALGLVDCIIFRQSFNRPNLWYSVVPKTKKCLDDIDKFIKE 675

Query: 542  NHFDECGIIYCLSRMDCEKVAEKLQECGHKASFYHGSMDPQQRTFVQKQWSKDEINIICA 721
            NHFDECGIIYCLSRMDCEKVAEKLQECGHKA+FYHG+MD  QR FVQKQWSKDEINIICA
Sbjct: 676  NHFDECGIIYCLSRMDCEKVAEKLQECGHKAAFYHGNMDAAQRAFVQKQWSKDEINIICA 735

Query: 722  TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMI 901
            TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDG RSSCVLYY Y DYIRVKHMI
Sbjct: 736  TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCVLYYSYSDYIRVKHMI 795

Query: 902  SQGALEQSSFASGSRRFSLANSDRALETNIENLLRMVSYCENDVDCRRLLQLIHFGEKFS 1081
             QG +EQS +  G  R +  NSDR LE N ENLLRMVSYCENDVDCRR+LQL+HFGEKF+
Sbjct: 796  VQGQIEQSPWTPGYNRINNTNSDRILEKNTENLLRMVSYCENDVDCRRILQLLHFGEKFN 855

Query: 1082 PLNCSRTCDNCAKDSHCTEKDVTDTAKQLVELVRTAGQQNSSSHILDVYKGSMNQNVKKY 1261
              NC +TCDNC++     EKDVT+TAKQLV+LV+  GQQ SSSHIL+VY+GS+NQ VKKY
Sbjct: 856  SGNCKKTCDNCSQIKALVEKDVTETAKQLVQLVKLTGQQFSSSHILEVYRGSLNQYVKKY 915

Query: 1262 RHNSLSLHG 1288
            RH +LSLHG
Sbjct: 916  RHETLSLHG 924


>ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
          Length = 1534

 Score =  713 bits (1841), Expect = 0.0
 Identities = 346/429 (80%), Positives = 379/429 (88%)
 Frame = +2

Query: 2    LICGGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWSEQQEIFRELSSENCKYKLL 181
            LI  GITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEW+EQQ+I REL+S+ CKYKLL
Sbjct: 821  LIHPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWTEQQDILRELNSDYCKYKLL 880

Query: 182  YVTPEKVAKSDVLLRHLESLNARDLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPN 361
            YVTPEKVA+SD LLRHL++L+ R+LL+RIVIDEAHCVSQWGHDFRPDYQ LGILKQKFPN
Sbjct: 881  YVTPEKVARSDNLLRHLDNLHFRELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 940

Query: 362  TPVXXXXXXXXXSVKEDVVRALGLVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKE 541
            TPV         SVKEDVV+ALGLVNCIIFRQSFNRPNL YSVIPKTK CL+DIDKF++E
Sbjct: 941  TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLRYSVIPKTKKCLEDIDKFIRE 1000

Query: 542  NHFDECGIIYCLSRMDCEKVAEKLQECGHKASFYHGSMDPQQRTFVQKQWSKDEINIICA 721
            NHFDECGI+YCLSRMDCEKVAEKLQECGHK +FYHGSMDP QR  VQKQWSKDEINIICA
Sbjct: 1001 NHFDECGIVYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPVQRASVQKQWSKDEINIICA 1060

Query: 722  TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMI 901
            TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ SSCVLYY Y DYIRVKHM+
Sbjct: 1061 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQHSSCVLYYTYSDYIRVKHML 1120

Query: 902  SQGALEQSSFASGSRRFSLANSDRALETNIENLLRMVSYCENDVDCRRLLQLIHFGEKFS 1081
            SQGA+EQSS  SG  R ++ NS R LETN ENL+RMVSYCENDVDCRRLLQL HFGEKF+
Sbjct: 1121 SQGAIEQSSMTSGYNRSNMINSGRILETNTENLVRMVSYCENDVDCRRLLQLAHFGEKFN 1180

Query: 1082 PLNCSRTCDNCAKDSHCTEKDVTDTAKQLVELVRTAGQQNSSSHILDVYKGSMNQNVKKY 1261
               C +TCDNC K +   EKDVT+ AKQLVELV+  GQ+ SSSHIL+VY+GS++Q VKK+
Sbjct: 1181 SSTCLKTCDNCLKITSFIEKDVTEIAKQLVELVKLTGQRFSSSHILEVYRGSLSQMVKKH 1240

Query: 1262 RHNSLSLHG 1288
            RH S+SLHG
Sbjct: 1241 RHESVSLHG 1249


>ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
          Length = 1160

 Score =  712 bits (1838), Expect = 0.0
 Identities = 344/429 (80%), Positives = 378/429 (88%)
 Frame = +2

Query: 2    LICGGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWSEQQEIFRELSSENCKYKLL 181
            LI  GITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEW+EQQEI REL+S+ CKYKLL
Sbjct: 447  LIRPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWAEQQEILRELNSDYCKYKLL 506

Query: 182  YVTPEKVAKSDVLLRHLESLNARDLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPN 361
            YVTPEKVA+SD LLRHL++L+ R+LL+RIVIDEAHCVSQWGHDFRPDYQ LGILKQKFPN
Sbjct: 507  YVTPEKVARSDNLLRHLDNLHFRELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 566

Query: 362  TPVXXXXXXXXXSVKEDVVRALGLVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKE 541
            TPV         SVKEDVV+ALGLVNCIIFRQSFNRPNL YSV+PKTK CL+DIDKF++ 
Sbjct: 567  TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVVPKTKKCLEDIDKFIRV 626

Query: 542  NHFDECGIIYCLSRMDCEKVAEKLQECGHKASFYHGSMDPQQRTFVQKQWSKDEINIICA 721
            NHFDECGIIYCLSRMDCEKVAEKLQECGHK +FYHGSMDP QR  VQKQWSKDEINIICA
Sbjct: 627  NHFDECGIIYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPAQRASVQKQWSKDEINIICA 686

Query: 722  TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMI 901
            TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSC+LYY Y DYIRVKHM+
Sbjct: 687  TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCILYYNYSDYIRVKHML 746

Query: 902  SQGALEQSSFASGSRRFSLANSDRALETNIENLLRMVSYCENDVDCRRLLQLIHFGEKFS 1081
            SQGA+EQSS  SG  R ++ NS R LETN ENL+RMVSYCENDVDCRRLLQL HFGEKF+
Sbjct: 747  SQGAIEQSSMTSGYNRSNMINSGRILETNTENLVRMVSYCENDVDCRRLLQLAHFGEKFN 806

Query: 1082 PLNCSRTCDNCAKDSHCTEKDVTDTAKQLVELVRTAGQQNSSSHILDVYKGSMNQNVKKY 1261
               C +TCDNC K +   EKDVT+ A QLVELV+  GQ+ SSSHIL+VY+GS++Q VKK+
Sbjct: 807  SSTCQKTCDNCLKITSFIEKDVTEIANQLVELVKLTGQRFSSSHILEVYRGSLSQMVKKH 866

Query: 1262 RHNSLSLHG 1288
            RH ++SLHG
Sbjct: 867  RHETVSLHG 875


>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score =  711 bits (1835), Expect = 0.0
 Identities = 345/428 (80%), Positives = 379/428 (88%)
 Frame = +2

Query: 2    LICGGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWSEQQEIFRELSSENCKYKLL 181
            LI  GITLVISPLVSLIQDQIMHLLQANIPAAYLSA+MEW+EQQEI RELSS  CKYKLL
Sbjct: 475  LISPGITLVISPLVSLIQDQIMHLLQANIPAAYLSASMEWNEQQEILRELSS--CKYKLL 532

Query: 182  YVTPEKVAKSDVLLRHLESLNARDLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPN 361
            Y TPEKVAKSDVL+R+L++L+AR+LLSRIVIDEAHCVSQWGHDFRPDYQ LGILKQKFPN
Sbjct: 533  YATPEKVAKSDVLMRNLDNLHARELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 592

Query: 362  TPVXXXXXXXXXSVKEDVVRALGLVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKE 541
            TPV         SVKEDVV+ALGLVNCIIFRQSFNRPNL YSV+PKT+ CLDDIDKF++E
Sbjct: 593  TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVLPKTRKCLDDIDKFIRE 652

Query: 542  NHFDECGIIYCLSRMDCEKVAEKLQECGHKASFYHGSMDPQQRTFVQKQWSKDEINIICA 721
            NHFDECGIIYCLSR+DCEKVAE+LQECGHKA+FYHGSMDP +R FVQKQWSKDEINIICA
Sbjct: 653  NHFDECGIIYCLSRLDCEKVAERLQECGHKAAFYHGSMDPARRAFVQKQWSKDEINIICA 712

Query: 722  TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMI 901
            TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYY Y DYIRVKHMI
Sbjct: 713  TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDYIRVKHMI 772

Query: 902  SQGALEQSSFASGSRRFSLANSDRALETNIENLLRMVSYCENDVDCRRLLQLIHFGEKFS 1081
            +QG +EQS  ASG  R ++A+S R LETN ENLLRMVSYCENDVDCRRLLQL+HFGEKF 
Sbjct: 773  TQGVVEQSPLASGQNRSNMASSGRILETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFD 832

Query: 1082 PLNCSRTCDNCAKDSHCTEKDVTDTAKQLVELVRTAGQQNSSSHILDVYKGSMNQNVKKY 1261
              +C +TCDNC K     EKDVT+ AKQLVELV+   +Q SSSHIL+VY+GS++Q VKK+
Sbjct: 833  SAHCKKTCDNCLKIKSFVEKDVTEIAKQLVELVKLTREQFSSSHILEVYRGSLSQYVKKH 892

Query: 1262 RHNSLSLH 1285
            RH +L LH
Sbjct: 893  RHETLGLH 900


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