BLASTX nr result

ID: Coptis23_contig00010709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010709
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284446.2| PREDICTED: prolyl-tRNA synthetase associated...   100   3e-19
ref|XP_003544677.1| PREDICTED: prolyl-tRNA synthetase associated...    98   1e-18
ref|XP_003526618.1| PREDICTED: uncharacterized protein LOC100817...    89   5e-16
ref|XP_004169374.1| PREDICTED: proline--tRNA ligase-like [Cucumi...    89   6e-16
ref|XP_004142621.1| PREDICTED: prolyl-tRNA synthetase associated...    89   6e-16

>ref|XP_002284446.2| PREDICTED: prolyl-tRNA synthetase associated domain-containing
           protein 1-like [Vitis vinifera]
           gi|302141840|emb|CBI19043.3| unnamed protein product
           [Vitis vinifera]
          Length = 320

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 54/121 (44%), Positives = 76/121 (62%), Gaps = 8/121 (6%)
 Frame = -3

Query: 554 PENSLSEEPTTENHDPVASNPKIINAKAAKQSN--------PALRQDSQESSMNVRKLVD 399
           PE S+S  PT E H  V +   +  AK  K SN        P +      S  +    V+
Sbjct: 193 PEKSVSSGPT-EKHASVDNKSSVAAAKTVKPSNNVQKVKEKPPISVHQLSSFTDPGHFVE 251

Query: 398 RLIDKTSSLVLSEITSDTIKQHGEQLGVVVADNIQKKLSVDLESLVMMLKNTAYAEGYHS 219
            ++DKTS++VLSEIT D IKQHGE LG V++D+I+K+LS+DL++L ++ KNTAY EG+H+
Sbjct: 252 EILDKTSAIVLSEITEDAIKQHGEHLGAVLSDSIRKRLSLDLKNLAIIYKNTAYTEGFHA 311

Query: 218 A 216
           A
Sbjct: 312 A 312


>ref|XP_003544677.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
           protein 1-like [Glycine max]
          Length = 320

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 55/120 (45%), Positives = 72/120 (60%), Gaps = 8/120 (6%)
 Frame = -3

Query: 554 PENSLSEEPTTENHDPVASNPKIINAKAAK--------QSNPALRQDSQESSMNVRKLVD 399
           PE   S +PT  NH  V   PKII+AK  K        +     +  S  +  +V   V+
Sbjct: 193 PEKQPSSQPTEGNHVSV-DEPKIISAKVVKSCVSGKNTKEKAVNKAHSSGNFADVELFVE 251

Query: 398 RLIDKTSSLVLSEITSDTIKQHGEQLGVVVADNIQKKLSVDLESLVMMLKNTAYAEGYHS 219
            ++ KTS L+LSEI  DTI QHGE LG VV+DN++K LS DLE+L M+ KNTAY EG+H+
Sbjct: 252 EILHKTSRLLLSEIKEDTITQHGENLGTVVSDNLRKGLSSDLENLTMIFKNTAYTEGFHA 311


>ref|XP_003526618.1| PREDICTED: uncharacterized protein LOC100817904 [Glycine max]
          Length = 322

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 8/119 (6%)
 Frame = -3

Query: 551 ENSLSEEPTTENHDPVASNPKIINAKAAKQSN--------PALRQDSQESSMNVRKLVDR 396
           + S S+ P   NH  V +    ++AK  K S+        PA   +S  S  +  + V+ 
Sbjct: 195 KQSSSQVPKDANHVSVDNGANTVSAKVVKPSSGGKNTKGTPAKNVNSSGSFADAGQFVEE 254

Query: 395 LIDKTSSLVLSEITSDTIKQHGEQLGVVVADNIQKKLSVDLESLVMMLKNTAYAEGYHS 219
           ++ KTS L+LSE+  + IK HGEQLG V++D +QK L+ + +SL M+ KNTAY EG+H+
Sbjct: 255 ILQKTSQLLLSEVKDENIKLHGEQLGTVLSDKLQKNLNAEFKSLAMIFKNTAYTEGFHA 313


>ref|XP_004169374.1| PREDICTED: proline--tRNA ligase-like [Cucumis sativus]
          Length = 323

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
 Frame = -3

Query: 557 SPENSLSEEPTTENHDPVASNPKIINAKAAKQSNPA-LRQDS-----QESSMNVRKLVDR 396
           +PE   S   + ENH       K + A   K S    + +D      Q +  NV K V+ 
Sbjct: 195 TPEKVSSRPDSNENHGVTDKKSKAVAANTVKPSTTVKVGKDKPTPKVQPTYANVEKFVEE 254

Query: 395 LIDKTSSLVLSEITSDTIKQHGEQLGVVVADNIQKKLSVDLESLVMMLKNTAYAEGYHSA 216
           ++DKTS++VLS++T +T+ +HGE LG  V+++I++ LS +L +L M+ KNTAY EG+H+ 
Sbjct: 255 ILDKTSAIVLSQLTEETVNKHGEHLGAAVSNSIKRHLSSELNNLSMIFKNTAYTEGFHAG 314

Query: 215 QS 210
            S
Sbjct: 315 SS 316


>ref|XP_004142621.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
           protein 1-like [Cucumis sativus]
          Length = 323

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
 Frame = -3

Query: 557 SPENSLSEEPTTENHDPVASNPKIINAKAAKQSNPA-LRQDS-----QESSMNVRKLVDR 396
           +PE   S   + ENH       K + A   K S    + +D      Q +  NV K V+ 
Sbjct: 195 TPEKVSSHPDSNENHGVTDKKSKAVAANTVKPSTTVKVGKDKPTPKVQPTYANVEKFVEE 254

Query: 395 LIDKTSSLVLSEITSDTIKQHGEQLGVVVADNIQKKLSVDLESLVMMLKNTAYAEGYHSA 216
           ++DKTS++VLS++T +T+ +HGE LG  V+++I++ LS +L +L M+ KNTAY EG+H+ 
Sbjct: 255 ILDKTSAIVLSQLTEETVNKHGEHLGAAVSNSIKRHLSSELNNLSMIFKNTAYTEGFHAG 314

Query: 215 QS 210
            S
Sbjct: 315 SS 316


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