BLASTX nr result
ID: Coptis23_contig00010689
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00010689 (631 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24276.3| unnamed protein product [Vitis vinifera] 161 1e-37 ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vit... 161 1e-37 ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei... 155 4e-36 ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isof... 155 4e-36 ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isof... 155 4e-36 >emb|CBI24276.3| unnamed protein product [Vitis vinifera] Length = 375 Score = 161 bits (407), Expect = 1e-37 Identities = 67/97 (69%), Positives = 78/97 (80%) Frame = +1 Query: 1 CYDAELCYDCFTDTFQARYPSHYSRTPVIEQCVHWDRIRAPPVDIPPHNVHASDCLDKLH 180 CYDAEL YD TDTFQARYP H RT IE V WDR+RAPPV+ PPH++H SDCL++LH Sbjct: 212 CYDAELSYDSHTDTFQARYPPHGRRTVAIENGVSWDRLRAPPVETPPHDLHMSDCLNELH 271 Query: 181 PGDHLKIQWRGSKELPYGWWYGVVGHLETCDEIRSLC 291 PGDH++IQWR +KE PYGWWYG+VGHLE+CD S C Sbjct: 272 PGDHIEIQWRRNKEFPYGWWYGIVGHLESCDGNESYC 308 Score = 80.5 bits (197), Expect = 2e-13 Identities = 34/55 (61%), Positives = 47/55 (85%) Frame = +3 Query: 438 CCCHKSVDTFIVVFNQYSPGSRWRQTTLSRKDHQEVGSEAEGFYGGIRKLHKKEE 602 C CH S +T ++ FNQY+PGSRWR+T+++RKDH+E G+EA+GFYGGIRKL + +E Sbjct: 308 CRCHNS-ETVVLEFNQYTPGSRWRRTSINRKDHREEGNEADGFYGGIRKLCRNDE 361 >ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vitis vinifera] Length = 396 Score = 161 bits (407), Expect = 1e-37 Identities = 67/97 (69%), Positives = 78/97 (80%) Frame = +1 Query: 1 CYDAELCYDCFTDTFQARYPSHYSRTPVIEQCVHWDRIRAPPVDIPPHNVHASDCLDKLH 180 CYDAEL YD TDTFQARYP H RT IE V WDR+RAPPV+ PPH++H SDCL++LH Sbjct: 233 CYDAELSYDSHTDTFQARYPPHGRRTVAIENGVSWDRLRAPPVETPPHDLHMSDCLNELH 292 Query: 181 PGDHLKIQWRGSKELPYGWWYGVVGHLETCDEIRSLC 291 PGDH++IQWR +KE PYGWWYG+VGHLE+CD S C Sbjct: 293 PGDHIEIQWRRNKEFPYGWWYGIVGHLESCDGNESYC 329 Score = 80.5 bits (197), Expect = 2e-13 Identities = 34/55 (61%), Positives = 47/55 (85%) Frame = +3 Query: 438 CCCHKSVDTFIVVFNQYSPGSRWRQTTLSRKDHQEVGSEAEGFYGGIRKLHKKEE 602 C CH S +T ++ FNQY+PGSRWR+T+++RKDH+E G+EA+GFYGGIRKL + +E Sbjct: 329 CRCHNS-ETVVLEFNQYTPGSRWRRTSINRKDHREEGNEADGFYGGIRKLCRNDE 382 >ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At2g32560-like [Cucumis sativus] Length = 369 Score = 155 bits (393), Expect = 4e-36 Identities = 64/97 (65%), Positives = 77/97 (79%) Frame = +1 Query: 1 CYDAELCYDCFTDTFQARYPSHYSRTPVIEQCVHWDRIRAPPVDIPPHNVHASDCLDKLH 180 CYDAELCYD TDTFQARYP H R IE V W+R+R+PP+D PPH++H SDCL++L Sbjct: 233 CYDAELCYDLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTPPHDLHVSDCLNELW 292 Query: 181 PGDHLKIQWRGSKELPYGWWYGVVGHLETCDEIRSLC 291 PGDH++IQWR +K+ PYGWWYGVVGHLETCD + C Sbjct: 293 PGDHIEIQWRKNKDFPYGWWYGVVGHLETCDGDANHC 329 >ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isoform 2 [Cucumis sativus] Length = 368 Score = 155 bits (393), Expect = 4e-36 Identities = 64/97 (65%), Positives = 77/97 (79%) Frame = +1 Query: 1 CYDAELCYDCFTDTFQARYPSHYSRTPVIEQCVHWDRIRAPPVDIPPHNVHASDCLDKLH 180 CYDAELCYD TDTFQARYP H R IE V W+R+R+PP+D PPH++H SDCL++L Sbjct: 205 CYDAELCYDLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTPPHDLHVSDCLNELW 264 Query: 181 PGDHLKIQWRGSKELPYGWWYGVVGHLETCDEIRSLC 291 PGDH++IQWR +K+ PYGWWYGVVGHLETCD + C Sbjct: 265 PGDHIEIQWRKNKDFPYGWWYGVVGHLETCDGDANHC 301 Score = 78.6 bits (192), Expect = 9e-13 Identities = 34/55 (61%), Positives = 42/55 (76%) Frame = +3 Query: 438 CCCHKSVDTFIVVFNQYSPGSRWRQTTLSRKDHQEVGSEAEGFYGGIRKLHKKEE 602 C CH S DT ++ FNQY+PGSRWR + RKDH+E G+E +GFYGGIRKL+ EE Sbjct: 301 CSCHYS-DTVVLEFNQYTPGSRWRLAIIDRKDHREEGNEVDGFYGGIRKLYSNEE 354 >ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isoform 1 [Cucumis sativus] Length = 396 Score = 155 bits (393), Expect = 4e-36 Identities = 64/97 (65%), Positives = 77/97 (79%) Frame = +1 Query: 1 CYDAELCYDCFTDTFQARYPSHYSRTPVIEQCVHWDRIRAPPVDIPPHNVHASDCLDKLH 180 CYDAELCYD TDTFQARYP H R IE V W+R+R+PP+D PPH++H SDCL++L Sbjct: 233 CYDAELCYDLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTPPHDLHVSDCLNELW 292 Query: 181 PGDHLKIQWRGSKELPYGWWYGVVGHLETCDEIRSLC 291 PGDH++IQWR +K+ PYGWWYGVVGHLETCD + C Sbjct: 293 PGDHIEIQWRKNKDFPYGWWYGVVGHLETCDGDANHC 329 Score = 78.6 bits (192), Expect = 9e-13 Identities = 34/55 (61%), Positives = 42/55 (76%) Frame = +3 Query: 438 CCCHKSVDTFIVVFNQYSPGSRWRQTTLSRKDHQEVGSEAEGFYGGIRKLHKKEE 602 C CH S DT ++ FNQY+PGSRWR + RKDH+E G+E +GFYGGIRKL+ EE Sbjct: 329 CSCHYS-DTVVLEFNQYTPGSRWRLAIIDRKDHREEGNEVDGFYGGIRKLYSNEE 382