BLASTX nr result

ID: Coptis23_contig00010689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010689
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24276.3| unnamed protein product [Vitis vinifera]              161   1e-37
ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vit...   161   1e-37
ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   155   4e-36
ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isof...   155   4e-36
ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isof...   155   4e-36

>emb|CBI24276.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  161 bits (407), Expect = 1e-37
 Identities = 67/97 (69%), Positives = 78/97 (80%)
 Frame = +1

Query: 1   CYDAELCYDCFTDTFQARYPSHYSRTPVIEQCVHWDRIRAPPVDIPPHNVHASDCLDKLH 180
           CYDAEL YD  TDTFQARYP H  RT  IE  V WDR+RAPPV+ PPH++H SDCL++LH
Sbjct: 212 CYDAELSYDSHTDTFQARYPPHGRRTVAIENGVSWDRLRAPPVETPPHDLHMSDCLNELH 271

Query: 181 PGDHLKIQWRGSKELPYGWWYGVVGHLETCDEIRSLC 291
           PGDH++IQWR +KE PYGWWYG+VGHLE+CD   S C
Sbjct: 272 PGDHIEIQWRRNKEFPYGWWYGIVGHLESCDGNESYC 308



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 34/55 (61%), Positives = 47/55 (85%)
 Frame = +3

Query: 438 CCCHKSVDTFIVVFNQYSPGSRWRQTTLSRKDHQEVGSEAEGFYGGIRKLHKKEE 602
           C CH S +T ++ FNQY+PGSRWR+T+++RKDH+E G+EA+GFYGGIRKL + +E
Sbjct: 308 CRCHNS-ETVVLEFNQYTPGSRWRRTSINRKDHREEGNEADGFYGGIRKLCRNDE 361


>ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vitis vinifera]
          Length = 396

 Score =  161 bits (407), Expect = 1e-37
 Identities = 67/97 (69%), Positives = 78/97 (80%)
 Frame = +1

Query: 1   CYDAELCYDCFTDTFQARYPSHYSRTPVIEQCVHWDRIRAPPVDIPPHNVHASDCLDKLH 180
           CYDAEL YD  TDTFQARYP H  RT  IE  V WDR+RAPPV+ PPH++H SDCL++LH
Sbjct: 233 CYDAELSYDSHTDTFQARYPPHGRRTVAIENGVSWDRLRAPPVETPPHDLHMSDCLNELH 292

Query: 181 PGDHLKIQWRGSKELPYGWWYGVVGHLETCDEIRSLC 291
           PGDH++IQWR +KE PYGWWYG+VGHLE+CD   S C
Sbjct: 293 PGDHIEIQWRRNKEFPYGWWYGIVGHLESCDGNESYC 329



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 34/55 (61%), Positives = 47/55 (85%)
 Frame = +3

Query: 438 CCCHKSVDTFIVVFNQYSPGSRWRQTTLSRKDHQEVGSEAEGFYGGIRKLHKKEE 602
           C CH S +T ++ FNQY+PGSRWR+T+++RKDH+E G+EA+GFYGGIRKL + +E
Sbjct: 329 CRCHNS-ETVVLEFNQYTPGSRWRRTSINRKDHREEGNEADGFYGGIRKLCRNDE 382


>ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At2g32560-like
           [Cucumis sativus]
          Length = 369

 Score =  155 bits (393), Expect = 4e-36
 Identities = 64/97 (65%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   CYDAELCYDCFTDTFQARYPSHYSRTPVIEQCVHWDRIRAPPVDIPPHNVHASDCLDKLH 180
           CYDAELCYD  TDTFQARYP H  R   IE  V W+R+R+PP+D PPH++H SDCL++L 
Sbjct: 233 CYDAELCYDLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTPPHDLHVSDCLNELW 292

Query: 181 PGDHLKIQWRGSKELPYGWWYGVVGHLETCDEIRSLC 291
           PGDH++IQWR +K+ PYGWWYGVVGHLETCD   + C
Sbjct: 293 PGDHIEIQWRKNKDFPYGWWYGVVGHLETCDGDANHC 329


>ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isoform 2 [Cucumis sativus]
          Length = 368

 Score =  155 bits (393), Expect = 4e-36
 Identities = 64/97 (65%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   CYDAELCYDCFTDTFQARYPSHYSRTPVIEQCVHWDRIRAPPVDIPPHNVHASDCLDKLH 180
           CYDAELCYD  TDTFQARYP H  R   IE  V W+R+R+PP+D PPH++H SDCL++L 
Sbjct: 205 CYDAELCYDLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTPPHDLHVSDCLNELW 264

Query: 181 PGDHLKIQWRGSKELPYGWWYGVVGHLETCDEIRSLC 291
           PGDH++IQWR +K+ PYGWWYGVVGHLETCD   + C
Sbjct: 265 PGDHIEIQWRKNKDFPYGWWYGVVGHLETCDGDANHC 301



 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 34/55 (61%), Positives = 42/55 (76%)
 Frame = +3

Query: 438 CCCHKSVDTFIVVFNQYSPGSRWRQTTLSRKDHQEVGSEAEGFYGGIRKLHKKEE 602
           C CH S DT ++ FNQY+PGSRWR   + RKDH+E G+E +GFYGGIRKL+  EE
Sbjct: 301 CSCHYS-DTVVLEFNQYTPGSRWRLAIIDRKDHREEGNEVDGFYGGIRKLYSNEE 354


>ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isoform 1 [Cucumis sativus]
          Length = 396

 Score =  155 bits (393), Expect = 4e-36
 Identities = 64/97 (65%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   CYDAELCYDCFTDTFQARYPSHYSRTPVIEQCVHWDRIRAPPVDIPPHNVHASDCLDKLH 180
           CYDAELCYD  TDTFQARYP H  R   IE  V W+R+R+PP+D PPH++H SDCL++L 
Sbjct: 233 CYDAELCYDLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTPPHDLHVSDCLNELW 292

Query: 181 PGDHLKIQWRGSKELPYGWWYGVVGHLETCDEIRSLC 291
           PGDH++IQWR +K+ PYGWWYGVVGHLETCD   + C
Sbjct: 293 PGDHIEIQWRKNKDFPYGWWYGVVGHLETCDGDANHC 329



 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 34/55 (61%), Positives = 42/55 (76%)
 Frame = +3

Query: 438 CCCHKSVDTFIVVFNQYSPGSRWRQTTLSRKDHQEVGSEAEGFYGGIRKLHKKEE 602
           C CH S DT ++ FNQY+PGSRWR   + RKDH+E G+E +GFYGGIRKL+  EE
Sbjct: 329 CSCHYS-DTVVLEFNQYTPGSRWRLAIIDRKDHREEGNEVDGFYGGIRKLYSNEE 382


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