BLASTX nr result

ID: Coptis23_contig00010688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010688
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24276.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vit...    70   1e-10
emb|CAN78683.1| hypothetical protein VITISV_043889 [Vitis vinifera]    70   1e-10
ref|XP_003556934.1| PREDICTED: F-box protein At2g32560-like [Gly...    69   5e-10
gb|EEE54342.1| hypothetical protein OsJ_01321 [Oryza sativa Japo...    67   1e-09

>emb|CBI24276.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = +1

Query: 34  SDTFQARYPSHYSQH-Q*EECVHWDTIRAPPVDIPPHNVHASDCLDKLHPGTMLRFSGEE 210
           +DTFQARYP H  +    E  V WD +RAPPV+ PPH++H SDCL++LHPG  +      
Sbjct: 223 TDTFQARYPPHGRRTVAIENGVSWDRLRAPPVETPPHDLHMSDCLNELHPGDHIEIQWRR 282

Query: 211 TKNF 222
            K F
Sbjct: 283 NKEF 286


>ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vitis vinifera]
          Length = 396

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = +1

Query: 34  SDTFQARYPSHYSQH-Q*EECVHWDTIRAPPVDIPPHNVHASDCLDKLHPGTMLRFSGEE 210
           +DTFQARYP H  +    E  V WD +RAPPV+ PPH++H SDCL++LHPG  +      
Sbjct: 244 TDTFQARYPPHGRRTVAIENGVSWDRLRAPPVETPPHDLHMSDCLNELHPGDHIEIQWRR 303

Query: 211 TKNF 222
            K F
Sbjct: 304 NKEF 307


>emb|CAN78683.1| hypothetical protein VITISV_043889 [Vitis vinifera]
          Length = 364

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = +1

Query: 34  SDTFQARYPSHYSQH-Q*EECVHWDTIRAPPVDIPPHNVHASDCLDKLHPGTMLRFSGEE 210
           +DTFQARYP H  +    E  V WD +RAPPV+ PPH++H SDCL++LHPG  +      
Sbjct: 179 TDTFQARYPPHGRRTVAIENGVSWDRLRAPPVETPPHDLHMSDCLNELHPGDHIEIQWRR 238

Query: 211 TKNF 222
            K F
Sbjct: 239 NKEF 242


>ref|XP_003556934.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 399

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = +1

Query: 34  SDTFQARYPSHYSQHQ*EEC-VHWDTIRAPPVDIPPHNVHASDCLDKLHPGTMLRFSGEE 210
           +DTFQARYP H  +    EC + W+ +RAPP+D  PH++H SDCL+ L+PG  +      
Sbjct: 247 TDTFQARYPPHGRRADARECGIPWERLRAPPIDTSPHDLHVSDCLNDLYPGDHIEIQWRR 306

Query: 211 TKNF 222
            K F
Sbjct: 307 NKEF 310


>gb|EEE54342.1| hypothetical protein OsJ_01321 [Oryza sativa Japonica Group]
          Length = 382

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = +1

Query: 34  SDTFQARYPSHYSQHQ*-EECVHWDTIRAPPVDIPPHNVHASDCLDKLHPGTMLRFSGEE 210
           SDTF+ARYP H  +    E+ VHWD +RAPPVD   H++HASDCL +L PG  +      
Sbjct: 240 SDTFRARYPPHGRRTVVLEDGVHWDRVRAPPVDTHAHDLHASDCLHELRPGDNIEIQWRR 299

Query: 211 TKNF 222
            K F
Sbjct: 300 NKEF 303


Top