BLASTX nr result

ID: Coptis23_contig00010683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010683
         (1564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320103.1| predicted protein [Populus trichocarpa] gi|2...   479   e-133
ref|XP_002302555.1| predicted protein [Populus trichocarpa] gi|2...   474   e-131
ref|XP_002272931.2| PREDICTED: peroxisome biogenesis protein 16-...   471   e-130
ref|XP_003521407.1| PREDICTED: peroxisome biogenesis protein 16-...   465   e-128
ref|XP_003529970.1| PREDICTED: peroxisome biogenesis protein 16-...   462   e-127

>ref|XP_002320103.1| predicted protein [Populus trichocarpa] gi|222860876|gb|EEE98418.1|
            predicted protein [Populus trichocarpa]
          Length = 357

 Score =  479 bits (1234), Expect = e-133
 Identities = 248/367 (67%), Positives = 294/367 (80%), Gaps = 1/367 (0%)
 Frame = -2

Query: 1437 MEVYKKWVRRNKDYVHSLESLANGLTWLLPERFSETEIGPEAVAAILGIITAINEHIIDN 1258
            ME YKKWVRRNKDYVHSLESLANGLTWLLPERFS +EIGPEAV AILGI+TAINEHIID 
Sbjct: 1    MEAYKKWVRRNKDYVHSLESLANGLTWLLPERFSASEIGPEAVTAILGIVTAINEHIIDT 60

Query: 1257 APVKTRMGFVEPSSFPWPLCISALKDLETLVEVAAQHYYGEDKKWNFLAFTEATKVLFRL 1078
             P +     V+P+SFP+ LCISA+KDLETLVEVAAQHYYG+DKKWNF+A TEATKVL RL
Sbjct: 61   TPTQMFADPVKPNSFPYSLCISAIKDLETLVEVAAQHYYGDDKKWNFIAVTEATKVLVRL 120

Query: 1077 ALFRDSGYKMLLHGGEIPNSEKGPNDLMSQNGMTGIANPNRHGPGY-SYGRQVQNLEGRA 901
            ALFR+SGYKMLLHGGE PN EK      SQ+   G     +HG  + S G+   NLEGRA
Sbjct: 121  ALFRNSGYKMLLHGGETPNIEKHLGFSSSQHNGGGF---QKHGAHHGSNGQNPWNLEGRA 177

Query: 900  LSALSRFGENVRVVSDPTRVTTLQHQHAALLEPPAPSVKRPTLSTILSERGLYGSLFLMA 721
            LSALSRFGEN R+ SDP  +  +QH+  A++EPP   ++RP+LS ILSE+G+ G+LFLM 
Sbjct: 178  LSALSRFGENARMGSDPVWLRGVQHKQ-AIMEPPPQMIERPSLSMILSEKGVQGALFLMG 236

Query: 720  EVLHITRPLIYVLLIRKYGVRSWIPWLLSLSVELIGTGLLSLVKLPGISRNGGYTSLSSL 541
            EVL ITRPLIYVLLIRKYG+RSWIPW LSL+V+ IG G L+ V     +++  Y  L++ 
Sbjct: 237  EVLFITRPLIYVLLIRKYGIRSWIPWFLSLAVDTIGAGFLTQV-----TKSRDY-HLTAS 290

Query: 540  EKNEVRRRKMLWALYLMRDPFFSKYTRQRFEKTEKFVDHVPVIGFLTAKLVELAIGAQTR 361
            E++E++RRK+LWALYLMRDPFFSKYTRQR + TEK ++ VP+IG LTAK+VEL +GAQTR
Sbjct: 291  EQDELKRRKLLWALYLMRDPFFSKYTRQRLQSTEKLLEPVPIIGLLTAKIVELVVGAQTR 350

Query: 360  YTYMSGS 340
            YTYMSGS
Sbjct: 351  YTYMSGS 357


>ref|XP_002302555.1| predicted protein [Populus trichocarpa] gi|222844281|gb|EEE81828.1|
            predicted protein [Populus trichocarpa]
          Length = 385

 Score =  474 bits (1219), Expect = e-131
 Identities = 250/392 (63%), Positives = 296/392 (75%), Gaps = 26/392 (6%)
 Frame = -2

Query: 1437 MEVYKKWVRRNKDYVHSLESLANGLTWLLPERFSETEIGPEAVAAILGIITAINEHIIDN 1258
            ME YKKWVRRNKDYVHSLESLANGLTWLLPERFS +EIGPEAV AILGIITAINEHIID 
Sbjct: 1    METYKKWVRRNKDYVHSLESLANGLTWLLPERFSASEIGPEAVTAILGIITAINEHIIDT 60

Query: 1257 APVKTRMGFVEPSSFPWPLCISALKDLETLVEVAAQHYYGEDKKWNFLAFTEATKVLFRL 1078
             P +  +G +EP+SFP+ LCISA+KDLETLVEVAAQHY+G++KKWNF+A TEATKVL RL
Sbjct: 61   TPTQMHVGPMEPNSFPYSLCISAIKDLETLVEVAAQHYFGDNKKWNFIAVTEATKVLVRL 120

Query: 1077 ALFRDSGYKMLLHGGEIPNSEKGPNDLMSQNGMTGIANP-NRHGPGYSYGRQVQNLEGRA 901
             LFR+SGYKMLLHGGE PN EK  +   SQ+ + G   P +RHGP    G    NLEGRA
Sbjct: 121  ILFRNSGYKMLLHGGETPNIEKHSDFSSSQHNVGGFPKPGSRHGPN---GLNPWNLEGRA 177

Query: 900  LSALSRFGENVRVVSDPTRVTTLQHQHAALLEPPAPSVKRPTLSTILSERGLYGSLFLMA 721
            LSALSRFGEN R+ SDP  +    HQ  A++EPP+ +++RPTLS ILSE+G+ G+LFLM 
Sbjct: 178  LSALSRFGENARMSSDPVWLRRAGHQQ-AIMEPPSSAIERPTLSMILSEKGVQGALFLMG 236

Query: 720  EVLHITRPLIYVLLIRKYGVRSWIPWLLSLSVELIGTGLLSLVKLPGISRNGG---YTSL 550
            EVL I RPLIYVL IRKYG+RSWIPW +SL+V+  G G L+ V     SR+GG   +  L
Sbjct: 237  EVLFIIRPLIYVLFIRKYGIRSWIPWFVSLAVDAGGVGFLTQVTK---SRDGGKEQHYHL 293

Query: 549  SSLEKNEV----------------------RRRKMLWALYLMRDPFFSKYTRQRFEKTEK 436
            ++ E++EV                      +RRK+LWALYLMRDPFF+KYTRQR + TEK
Sbjct: 294  TASEQDEVGVLQILTVQTAYASSSSTFRMLKRRKLLWALYLMRDPFFTKYTRQRLQSTEK 353

Query: 435  FVDHVPVIGFLTAKLVELAIGAQTRYTYMSGS 340
             V+ VP+IG LTAK+VEL +GAQTRYTYMSGS
Sbjct: 354  LVEPVPIIGLLTAKIVELVVGAQTRYTYMSGS 385


>ref|XP_002272931.2| PREDICTED: peroxisome biogenesis protein 16-like [Vitis vinifera]
            gi|296089132|emb|CBI38835.3| unnamed protein product
            [Vitis vinifera]
          Length = 368

 Score =  471 bits (1213), Expect = e-130
 Identities = 241/370 (65%), Positives = 283/370 (76%), Gaps = 4/370 (1%)
 Frame = -2

Query: 1437 MEVYKKWVRRNKDYVHSLESLANGLTWLLPERFSETEIGPEAVAAILGIITAINEHIIDN 1258
            ME YKKWVRRN+DYVHSLESLANGLTWLLPERFS +EIGPEAV A LGIITAINEHIID+
Sbjct: 1    MEAYKKWVRRNRDYVHSLESLANGLTWLLPERFSSSEIGPEAVTAFLGIITAINEHIIDS 60

Query: 1257 APVKTRMGFVEPSSFPWPLCISALKDLETLVEVAAQHYYGEDKKWNFLAFTEATKVLFRL 1078
             P        E SSFP+ LCISALKDLETLVEV A+H+YG +KKWNF+A TEATKVL RL
Sbjct: 61   TPTHMHTNSTE-SSFPYSLCISALKDLETLVEVVAEHFYGNEKKWNFIAITEATKVLVRL 119

Query: 1077 ALFRDSGYKMLLHGGEIPNSEKGPNDLMSQNGMTGIANPN-RHGPGYSY---GRQVQNLE 910
            ALF + GYKMLLHGGE PN E   N   S +   G   P   HG GY     G+   NLE
Sbjct: 120  ALFHNHGYKMLLHGGETPNVENSANASSSPHSNGGFTKPRGHHGHGYLQRYPGQNPWNLE 179

Query: 909  GRALSALSRFGENVRVVSDPTRVTTLQHQHAALLEPPAPSVKRPTLSTILSERGLYGSLF 730
            GRALSALSRFG+N R+VSDPT +  +Q Q A +++PP P VKR TLS+ILSE+GL+G LF
Sbjct: 180  GRALSALSRFGDNARMVSDPTWLHRVQQQQA-IMDPPTPVVKRHTLSSILSEKGLHGVLF 238

Query: 729  LMAEVLHITRPLIYVLLIRKYGVRSWIPWLLSLSVELIGTGLLSLVKLPGISRNGGYTSL 550
            +M EVL ITRP IYVL IRKYG+R+W PW +SL+V+L+G G+ S     G +R      +
Sbjct: 239  VMGEVLFITRPFIYVLFIRKYGIRAWNPWFISLAVDLLGMGITSYATGSGDNRKHKQFHI 298

Query: 549  SSLEKNEVRRRKMLWALYLMRDPFFSKYTRQRFEKTEKFVDHVPVIGFLTAKLVELAIGA 370
            S+ EK+E++RRK+LWALYLMRDPFFSKYTRQR E T+K ++ VP+IGFLT K++EL  GA
Sbjct: 299  SASEKDELKRRKLLWALYLMRDPFFSKYTRQRLESTQKVLEPVPIIGFLTEKIIELITGA 358

Query: 369  QTRYTYMSGS 340
            QTRYTYMSGS
Sbjct: 359  QTRYTYMSGS 368


>ref|XP_003521407.1| PREDICTED: peroxisome biogenesis protein 16-like [Glycine max]
          Length = 366

 Score =  465 bits (1197), Expect = e-128
 Identities = 243/369 (65%), Positives = 285/369 (77%), Gaps = 3/369 (0%)
 Frame = -2

Query: 1437 MEVYKKWVRRNKDYVHSLESLANGLTWLLPERFSETEIGPEAVAAILGIITAINEHIIDN 1258
            ME YK+WVR+NK++VHS+ESLANGLTWLLPERFSE+EIGPEAV  ILGIITA+NEHIID 
Sbjct: 1    MEAYKRWVRQNKEFVHSMESLANGLTWLLPERFSESEIGPEAVTTILGIITALNEHIIDT 60

Query: 1257 APVKTRMGFVEPSSFPWPLCISALKDLETLVEVAAQHYYGEDKKWNFLAFTEATKVLFRL 1078
            AP +   G V+P SFP+PLC+SALKDLETLVEV AQ YYG+DKKWNFLA TEATKVL RL
Sbjct: 61   APKQNITGSVKPYSFPYPLCLSALKDLETLVEVVAQQYYGDDKKWNFLAVTEATKVLVRL 120

Query: 1077 ALFRDSGYKMLLHGGEIPNSEKGPNDLMSQNGMTGIANPNRHGPGY---SYGRQVQNLEG 907
            +LFR SGYKMLL GGE PN E+  +   SQ+ + G+     H PGY   + G    NLEG
Sbjct: 121  SLFRKSGYKMLLQGGETPNDEEHSDSFTSQHHI-GLKPDVHHRPGYMKNNLGANPMNLEG 179

Query: 906  RALSALSRFGENVRVVSDPTRVTTLQHQHAALLEPPAPSVKRPTLSTILSERGLYGSLFL 727
            RALSAL RFGE V+  SD   +  ++HQ A  +EP   SV RPTL TILSERGL G+LFL
Sbjct: 180  RALSALVRFGEKVK-GSDSVWLRRVEHQQAT-MEPTTSSVDRPTLLTILSERGLRGALFL 237

Query: 726  MAEVLHITRPLIYVLLIRKYGVRSWIPWLLSLSVELIGTGLLSLVKLPGISRNGGYTSLS 547
            + EVL I+RPLIYVL IRKYG+RSW PW LSL+++ IG  +LSL+  P          LS
Sbjct: 238  IGEVLFISRPLIYVLFIRKYGIRSWTPWFLSLAIDCIGNSILSLMTSPVAGGKERMFHLS 297

Query: 546  SLEKNEVRRRKMLWALYLMRDPFFSKYTRQRFEKTEKFVDHVPVIGFLTAKLVELAIGAQ 367
            + EK+EV+RRK+L+ LYLMRDPFFSKYTRQR E TEK ++ +PV+GFLTAKLVEL IGAQ
Sbjct: 298  APEKDEVKRRKLLFVLYLMRDPFFSKYTRQRLESTEKVLEPIPVMGFLTAKLVELIIGAQ 357

Query: 366  TRYTYMSGS 340
            TRYTYMSGS
Sbjct: 358  TRYTYMSGS 366


>ref|XP_003529970.1| PREDICTED: peroxisome biogenesis protein 16-like [Glycine max]
          Length = 377

 Score =  462 bits (1188), Expect = e-127
 Identities = 241/366 (65%), Positives = 281/366 (76%), Gaps = 3/366 (0%)
 Frame = -2

Query: 1428 YKKWVRRNKDYVHSLESLANGLTWLLPERFSETEIGPEAVAAILGIITAINEHIIDNAPV 1249
            YK+WVR+NK++VHS+ESLANGLTWLLPERFSE+EIGPEAV  ILGIITA+NEHIID AP 
Sbjct: 15   YKRWVRQNKEFVHSMESLANGLTWLLPERFSESEIGPEAVTTILGIITALNEHIIDTAPK 74

Query: 1248 KTRMGFVEPSSFPWPLCISALKDLETLVEVAAQHYYGEDKKWNFLAFTEATKVLFRLALF 1069
            +   G VEP SFP+PLC+SALKDLETLVEV AQ YYG+DKKWNFLA TEATKVL RL+LF
Sbjct: 75   QNITGSVEPYSFPYPLCLSALKDLETLVEVVAQQYYGDDKKWNFLAITEATKVLVRLSLF 134

Query: 1068 RDSGYKMLLHGGEIPNSEKGPNDLMSQNGMTGIANPNRHGPGY---SYGRQVQNLEGRAL 898
            R SGYKMLL GGE PN E+  +   SQ+ M G+     H PGY   + G +  N EGRAL
Sbjct: 135  RKSGYKMLLQGGETPNDEEYSDSFTSQHHM-GLKPDVHHRPGYMKNNLGAKPMNQEGRAL 193

Query: 897  SALSRFGENVRVVSDPTRVTTLQHQHAALLEPPAPSVKRPTLSTILSERGLYGSLFLMAE 718
            SAL RFGE  +  SDP  +  ++HQ A  +EP    V RPTL TILSERGL G+LF + E
Sbjct: 194  SALVRFGEKAK-GSDPVWLRRVEHQQAT-MEPTTSRVDRPTLLTILSERGLCGALFFIGE 251

Query: 717  VLHITRPLIYVLLIRKYGVRSWIPWLLSLSVELIGTGLLSLVKLPGISRNGGYTSLSSLE 538
            VL I+RPLIYVL IRKYG+RSW PW LSL+++ IG  +LSL+             LS+LE
Sbjct: 252  VLLISRPLIYVLFIRKYGIRSWTPWFLSLAIDCIGNSILSLITSSVAGGKDRMFHLSALE 311

Query: 537  KNEVRRRKMLWALYLMRDPFFSKYTRQRFEKTEKFVDHVPVIGFLTAKLVELAIGAQTRY 358
            K+EV+RRK+L+ LYLMRDPFFSKYTRQR E TEK ++ +PVIGFLTAKLVEL IGAQTRY
Sbjct: 312  KDEVKRRKLLFVLYLMRDPFFSKYTRQRLESTEKVLEPIPVIGFLTAKLVELIIGAQTRY 371

Query: 357  TYMSGS 340
            TYMSGS
Sbjct: 372  TYMSGS 377


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