BLASTX nr result

ID: Coptis23_contig00010674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010674
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27208.3| unnamed protein product [Vitis vinifera]              112   2e-23
ref|XP_002275152.1| PREDICTED: thioredoxin O1, mitochondrial [Vi...   112   2e-23
ref|XP_002326635.1| thioredoxin o [Populus trichocarpa] gi|22283...   109   3e-22
gb|AFK36424.1| unknown [Lotus japonicus]                              107   1e-21
gb|ADN34215.1| thioredoxin [Cucumis melo subsp. melo]                 105   3e-21

>emb|CBI27208.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/88 (56%), Positives = 61/88 (69%)
 Frame = -1

Query: 269 VPCVFYFTAVWCGPCKLVGPIVEALSKKYPHVKIYKIDVDQKELMRTLTEWGIGTVPTFR 90
           +P +FYFTAVWCGPC+ + PI+  LS+KYPHV  YKID+DQ  L  TL    I +VPT  
Sbjct: 119 LPAIFYFTAVWCGPCRFIAPIIAELSEKYPHVTTYKIDIDQDGLENTLRRLNIASVPTLH 178

Query: 89  FFREGKKLREMTGADVPLLAQTMEDLYK 6
           FF+ GKK  E+ GADV  L  TM+ LYK
Sbjct: 179 FFQNGKKAAEIIGADVARLKDTMDKLYK 206


>ref|XP_002275152.1| PREDICTED: thioredoxin O1, mitochondrial [Vitis vinifera]
           gi|359473079|ref|XP_003631244.1| PREDICTED: thioredoxin
           O1, mitochondrial-like [Vitis vinifera]
           gi|297738008|emb|CBI27209.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/88 (56%), Positives = 61/88 (69%)
 Frame = -1

Query: 269 VPCVFYFTAVWCGPCKLVGPIVEALSKKYPHVKIYKIDVDQKELMRTLTEWGIGTVPTFR 90
           +P +FYFTAVWCGPC+ + PI+  LS+KYPHV  YKID+DQ  L  TL    I +VPT  
Sbjct: 97  LPAIFYFTAVWCGPCRFIAPIIAELSEKYPHVTTYKIDIDQDGLENTLRRLNIASVPTLH 156

Query: 89  FFREGKKLREMTGADVPLLAQTMEDLYK 6
           FF+ GKK  E+ GADV  L  TM+ LYK
Sbjct: 157 FFQNGKKAAEIIGADVARLKDTMDKLYK 184


>ref|XP_002326635.1| thioredoxin o [Populus trichocarpa] gi|222833957|gb|EEE72434.1|
           thioredoxin o [Populus trichocarpa]
          Length = 189

 Score =  109 bits (272), Expect = 3e-22
 Identities = 47/87 (54%), Positives = 57/87 (65%)
 Frame = -1

Query: 266 PCVFYFTAVWCGPCKLVGPIVEALSKKYPHVKIYKIDVDQKELMRTLTEWGIGTVPTFRF 87
           P VFYFTA WCGPCK + P++E LSKKYPH  IYK+D+D + L   L    I  VPT  F
Sbjct: 101 PAVFYFTATWCGPCKFISPVIEELSKKYPHATIYKVDIDTEGLQNALASLNIAAVPTLDF 160

Query: 86  FREGKKLREMTGADVPLLAQTMEDLYK 6
           ++ GKK   + GADV  L  TME LY+
Sbjct: 161 YKNGKKETTIVGADVAKLKNTMESLYR 187


>gb|AFK36424.1| unknown [Lotus japonicus]
          Length = 179

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/85 (58%), Positives = 59/85 (69%)
 Frame = -1

Query: 260 VFYFTAVWCGPCKLVGPIVEALSKKYPHVKIYKIDVDQKELMRTLTEWGIGTVPTFRFFR 81
           + YFTAVWCGPCK + PIV  LSKKYPHV  YKID+DQ+ L  TLT+  I +VPT  FF 
Sbjct: 93  IIYFTAVWCGPCKFISPIVGELSKKYPHVTTYKIDIDQEALRGTLTKLQISSVPTLHFFL 152

Query: 80  EGKKLREMTGADVPLLAQTMEDLYK 6
            GKK  E+ GADV  L +  E L+K
Sbjct: 153 NGKKADELVGADVAKLNRITEKLFK 177


>gb|ADN34215.1| thioredoxin [Cucumis melo subsp. melo]
          Length = 198

 Score =  105 bits (263), Expect = 3e-21
 Identities = 45/88 (51%), Positives = 63/88 (71%)
 Frame = -1

Query: 269 VPCVFYFTAVWCGPCKLVGPIVEALSKKYPHVKIYKIDVDQKELMRTLTEWGIGTVPTFR 90
           +P +FYFTA WCGPC+L+ P+++ LSK YP V  YKID+DQ+ L RTL +  I +VPT  
Sbjct: 110 LPAIFYFTAAWCGPCRLLAPVIKELSKNYPEVTTYKIDIDQEGLERTLNDLNITSVPTLY 169

Query: 89  FFREGKKLREMTGADVPLLAQTMEDLYK 6
           FF++GK+  ++ GADV  +   ME +YK
Sbjct: 170 FFQDGKEAGQIVGADVAGIKNMMEKIYK 197


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