BLASTX nr result
ID: Coptis23_contig00010670
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00010670
(1027 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276602.1| PREDICTED: uncharacterized protein LOC100255... 103 4e-29
ref|XP_002304530.1| predicted protein [Populus trichocarpa] gi|2... 102 6e-26
ref|XP_002509888.1| transcription factor, putative [Ricinus comm... 102 3e-24
ref|XP_004143880.1| PREDICTED: uncharacterized protein LOC101212... 103 8e-24
gb|ABK96565.1| unknown [Populus trichocarpa x Populus deltoides] 102 2e-23
>ref|XP_002276602.1| PREDICTED: uncharacterized protein LOC100255255 [Vitis vinifera]
Length = 684
Score = 103 bits (258), Expect(3) = 4e-29
Identities = 63/143 (44%), Positives = 69/143 (48%), Gaps = 36/143 (25%)
Frame = +1
Query: 601 RCQKVGCNPAT--RVLRATLHMGSVVAISANI*GGT*SAEGRIGLCIAHGGGRHCNHEGW 774
RCQK GC+ R + H G G T SAEGR CIAHGGGR C+HEG
Sbjct: 292 RCQKTGCHKGAEGRTVYCKAHGGGR---RCEFLGCTKSAEGRTDYCIAHGGGRRCSHEGC 348
Query: 775 TRAARGNSSLRIRHGA----------------------------------ERGAKECTMF 852
TRAARG S L IRHG +GA+ TM+
Sbjct: 349 TRAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQFPACTKGAQGSTMY 408
Query: 853 CKAHGEGKRCKAVGCTKGAEGST 921
CKAHG GKRC GCTKGAEGST
Sbjct: 409 CKAHGGGKRCTVPGCTKGAEGST 431
Score = 42.0 bits (97), Expect(3) = 4e-29
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +2
Query: 380 AIFANQVPGKVCPDSINLEISTSMVDMSRSSINCASG---SF*LP*LSKR*NLYLMDGKG 550
++F++Q+P ++ P S ++S+S++ +SS+ C SG S + + GKG
Sbjct: 217 SLFSHQIPQRMDPTSPVPDLSSSIITTPKSSVTCTSGITQQQPQRSTSSKTCQFKGCGKG 276
Query: 551 ARGSSGLCIA 580
ARG+SGLCIA
Sbjct: 277 ARGASGLCIA 286
Score = 29.6 bits (65), Expect(3) = 4e-29
Identities = 40/146 (27%), Positives = 53/146 (36%), Gaps = 43/146 (29%)
Frame = +3
Query: 60 KRWTEIDGPIGPEHGRS*P---GHLMSSYDSMLGSETDCT---------EGSSTNHALDI 203
++W+ IDG G + G S G SS DS S T CT E SS + LD
Sbjct: 61 RKWSLIDGTRGQQVGSSLSLGLGRSSSSSDSKGSSATACTTMSSAKENEEESSMDLELDF 120
Query: 204 NLQPSNENG----KYLCPEKSV----------------PAECSAT-----------LETP 290
L NE KY PAE T ++ P
Sbjct: 121 TLHLGNEKTPSTKKYAGSSLKALELQTDIDLELSLSTGPAESDITSIHASSTLLHAMDMP 180
Query: 291 LSGSTVPVVYVGSTSSCWKFGNAVAN 368
L + + GSTSS WK G ++++
Sbjct: 181 LGVARAAHLDEGSTSSPWKPGTSLSS 206
Score = 60.8 bits (146), Expect(2) = 2e-07
Identities = 42/122 (34%), Positives = 49/122 (40%), Gaps = 15/122 (12%)
Frame = +1
Query: 601 RCQKVGCNPATRVLRATLHMGSVVAISANI*GGT*SAEGRIGLCIAHGGGRHCNHEGWTR 780
RCQK C + L L + T A+G C AHGGG+ C G T+
Sbjct: 367 RCQKENCTKSAEGLSG-LCISHGGGRRCQFPACTKGAQGSTMYCKAHGGGKRCTVPGCTK 425
Query: 781 AARGNSSLRIRHGAERGAKEC---------------TMFCKAHGEGKRCKAVGCTKGAEG 915
A G++ HG G K C T FC AHG GKRC CTK A G
Sbjct: 426 GAEGSTPFCKGHG---GGKRCSFQGGGICPKSVHGGTNFCVAHGGGKRCAVPECTKSARG 482
Query: 916 ST 921
T
Sbjct: 483 RT 484
Score = 21.6 bits (44), Expect(2) = 2e-07
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 545 KGARGSSGLCI 577
+ ARG SGLCI
Sbjct: 350 RAARGKSGLCI 360
Score = 58.2 bits (139), Expect = 3e-06
Identities = 37/104 (35%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Frame = +1
Query: 706 SAEGRIGLCIAHGGGRHCNHEGWTRAARGNSSLRIRHGAERGAKEC------------TM 849
S G C+AHGGG+ C T++ARG + +RHG G K C T
Sbjct: 454 SVHGGTNFCVAHGGGKRCAVPECTKSARGRTDYCVRHG---GGKRCKSEGCGKSAQGSTD 510
Query: 850 FCKAHGEGKRCK--AVGCTKGAEGSTS*VLVKWHH*LLKSYSAL 975
FCKAHG GKRC VG G++ + L S++AL
Sbjct: 511 FCKAHGGGKRCSWGQVGSQFGSQDGPCSSFARGKTGLCASHNAL 554
>ref|XP_002304530.1| predicted protein [Populus trichocarpa] gi|222841962|gb|EEE79509.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 102 bits (254), Expect(3) = 6e-26
Identities = 63/143 (44%), Positives = 69/143 (48%), Gaps = 36/143 (25%)
Frame = +1
Query: 601 RCQKVGCNPAT--RVLRATLHMGSVVAISANI*GGT*SAEGRIGLCIAHGGGRHCNHEGW 774
RC+K GC R + H G G T SAEGR CIAHGGGR C+HEG
Sbjct: 236 RCRKAGCLKGAEGRTVYCKAHGGGR---RCEFLGCTKSAEGRTDFCIAHGGGRRCSHEGC 292
Query: 775 TRAARGNSSLRIRH----------------------------------GAERGAKECTMF 852
TRAARG S L IRH G +GA+ TMF
Sbjct: 293 TRAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQFLGCTKGAQGSTMF 352
Query: 853 CKAHGEGKRCKAVGCTKGAEGST 921
CKAHG GKRC A GC+KGAEGST
Sbjct: 353 CKAHGGGKRCTAPGCSKGAEGST 375
Score = 33.5 bits (75), Expect(3) = 6e-26
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Frame = +2
Query: 380 AIFANQVPGKVCPDSINLEISTSMVDMSRSSINCASGSF*LP*LSKR*NLYLMD------ 541
+ F NQ+P P + S+S++ +SS+ C SG +S++ Y
Sbjct: 159 SFFFNQIPRTRDPTPSFPDHSSSVITTPKSSVTCTSG------ISQQQQPYQRGTSLKLC 212
Query: 542 -----GKGARGSSGLCIA 580
GKGARG+SG CI+
Sbjct: 213 QVEGCGKGARGASGRCIS 230
Score = 28.9 bits (63), Expect(3) = 6e-26
Identities = 39/142 (27%), Positives = 50/142 (35%), Gaps = 41/142 (28%)
Frame = +3
Query: 51 KKIKR-WTEIDGPIGPEHGRS*P---GHLMSSYDSMLGSETDCTEGSST-----NHALDI 203
K IKR W I+G +G G S G SS DS S T CT SS ++D+
Sbjct: 3 KGIKRKWNLINGSMGQNVGSSLSLGLGRSSSSSDSKGSSATACTSMSSAIETDEESSMDL 62
Query: 204 NLQPSNENGKYLCPEKSV--------------------PAECSAT------------LET 287
+ + K L P+K P+E T +
Sbjct: 63 DFSLHLGHEKMLSPKKPARSYLKGMEPKVDLELGLSTGPSESDVTSIHPPSSSLEFAFDM 122
Query: 288 PLSGSTVPVVYVGSTSSCWKFG 353
PL+ V GSTS WK G
Sbjct: 123 PLAMGGASNVNEGSTSCSWKSG 144
Score = 65.9 bits (159), Expect(2) = 5e-09
Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Frame = +1
Query: 601 RCQKVGCNPATR--VLRATLHMGSVVAISANI*GGT*SAEGRIGLCIAHGGGRHCNHEGW 774
RCQ +GC + + H G + G + AEG C HGGG+ C +G
Sbjct: 336 RCQFLGCTKGAQGSTMFCKAHGGGKRCTAP---GCSKGAEGSTPFCKGHGGGKRCAFQGG 392
Query: 775 ---TRAARGNSSLRIRHGAER--GAKECT-------MFCKAHGEGKRCKAVGCTKGAEGS 918
T++ G ++ + HG + A ECT FC HG GKRCK GC K A+GS
Sbjct: 393 GVCTKSVHGGTNFCVAHGGGKRCAAPECTKSARGRTQFCVRHGGGKRCKFEGCGKSAQGS 452
Query: 919 T 921
T
Sbjct: 453 T 453
Score = 21.6 bits (44), Expect(2) = 5e-09
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 545 KGARGSSGLCI 577
+ ARG SGLCI
Sbjct: 294 RAARGKSGLCI 304
>ref|XP_002509888.1| transcription factor, putative [Ricinus communis]
gi|223549787|gb|EEF51275.1| transcription factor,
putative [Ricinus communis]
Length = 677
Score = 102 bits (254), Expect(2) = 3e-24
Identities = 64/143 (44%), Positives = 69/143 (48%), Gaps = 36/143 (25%)
Frame = +1
Query: 601 RCQKVGCNPAT--RVLRATLHMGSVVAISANI*GGT*SAEGRIGLCIAHGGGRHCNHEGW 774
RCQK GC+ R + H G G T SAEGR CIAHGGGR C+ EG
Sbjct: 289 RCQKPGCHKGAEGRTVYCKSHGGGR---RCEFLGCTKSAEGRTDFCIAHGGGRRCSSEGC 345
Query: 775 TRAARGNSSLRIRH----------------------------------GAERGAKECTMF 852
TRAARG S L IRH G +GA+ TMF
Sbjct: 346 TRAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQSLGCTKGAQGSTMF 405
Query: 853 CKAHGEGKRCKAVGCTKGAEGST 921
CKAHG GKRC A GCTKGAEGST
Sbjct: 406 CKAHGGGKRCTAPGCTKGAEGST 428
Score = 36.6 bits (83), Expect(2) = 3e-24
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Frame = +2
Query: 380 AIFANQVPGKVCPDSINLEISTSMVDMSRSSINCASGSF*LP*LSKR-*NLYLMD----G 544
+ F NQVP P S+ ++S+S++ SS+ C SG +R N L + G
Sbjct: 212 SFFFNQVPKTSDPISVLPDLSSSVITAPVSSVTCTSGITQRQQPHQRSSNSKLCEVEGCG 271
Query: 545 KGARGSSGLCIA 580
KGARG+SG CI+
Sbjct: 272 KGARGASGRCIS 283
Score = 66.6 bits (161), Expect(2) = 3e-09
Identities = 42/121 (34%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Frame = +1
Query: 601 RCQKVGCNPATR--VLRATLHMGSVVAISANI*GGT*SAEGRIGLCIAHGGGRHCNHEGW 774
RCQ +GC + + H G + G T AEG C HGGG+ C +G
Sbjct: 389 RCQSLGCTKGAQGSTMFCKAHGGGKRCTAP---GCTKGAEGSTPFCKGHGGGKRCAFQGG 445
Query: 775 ---TRAARGNSSLRIRHGAER--GAKECTM-------FCKAHGEGKRCKAVGCTKGAEGS 918
T++ G ++ + HG + ECT FC HG GKRCK GC K A+GS
Sbjct: 446 GVCTKSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDFCVRHGGGKRCKNEGCGKSAQGS 505
Query: 919 T 921
T
Sbjct: 506 T 506
Score = 21.6 bits (44), Expect(2) = 3e-09
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 545 KGARGSSGLCI 577
+ ARG SGLCI
Sbjct: 347 RAARGKSGLCI 357
Score = 58.5 bits (140), Expect(3) = 4e-09
Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Frame = +1
Query: 700 T*SAEGRIGLCIAHGGGRHCNHEGWTRAARGNSSLRIRHGAERGAKEC------------ 843
T S G C+AHGGG+ C T++ARG + +RHG G K C
Sbjct: 449 TKSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDFCVRHG---GGKRCKNEGCGKSAQGS 505
Query: 844 TMFCKAHGEGKRC 882
T FCKAHG GKRC
Sbjct: 506 TDFCKAHGGGKRC 518
Score = 28.1 bits (61), Expect(3) = 4e-09
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +3
Query: 567 VFVSPHGDGHG*VSESWLQSCNKGAEGHTAY--GKCGSHQCQYLGG 698
+F HG G C KGAEG T + G G +C + GG
Sbjct: 404 MFCKAHGGG----KRCTAPGCTKGAEGSTPFCKGHGGGKRCAFQGG 445
Score = 20.4 bits (41), Expect(3) = 4e-09
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 545 KGARGSSGLCIA 580
K A G SGLCI+
Sbjct: 372 KSAEGLSGLCIS 383
>ref|XP_004143880.1| PREDICTED: uncharacterized protein LOC101212238 isoform 1 [Cucumis
sativus] gi|449452268|ref|XP_004143881.1| PREDICTED:
uncharacterized protein LOC101212238 isoform 2 [Cucumis
sativus] gi|449452270|ref|XP_004143882.1| PREDICTED:
uncharacterized protein LOC101212238 isoform 3 [Cucumis
sativus]
Length = 670
Score = 103 bits (257), Expect(2) = 8e-24
Identities = 64/143 (44%), Positives = 70/143 (48%), Gaps = 36/143 (25%)
Frame = +1
Query: 601 RCQKVGCNPAT--RVLRATLHMGSVVAISANI*GGT*SAEGRIGLCIAHGGGRHCNHEGW 774
RCQK+GC+ R + H G G T SAEGR CIAHGGGR CN EG
Sbjct: 294 RCQKLGCHKGAEGRTVYCKAHGGGRRCQHL---GCTKSAEGRTDYCIAHGGGRRCNREGC 350
Query: 775 TRAARGNSSLRIRH----------------------------------GAERGAKECTMF 852
TRAARG S L IRH G +GA+ TM+
Sbjct: 351 TRAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQTPGCTKGAQGSTMY 410
Query: 853 CKAHGEGKRCKAVGCTKGAEGST 921
CKAHG GKRC A GCTKGAEGST
Sbjct: 411 CKAHGGGKRCTAPGCTKGAEGST 433
Score = 33.9 bits (76), Expect(2) = 8e-24
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +2
Query: 434 EISTSMVDMSRSSINCASGSF*LP*LSKR*NLYLMD----GKGARGSSGLCIA 580
++S+S++ M +SS+ C SG ++ N + GKGARG+SG CI+
Sbjct: 236 DLSSSVLTMPKSSVTCTSGITQQQRFNRSSNSKICQVEGCGKGARGASGRCIS 288
Score = 65.1 bits (157), Expect(2) = 9e-09
Identities = 41/121 (33%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Frame = +1
Query: 601 RCQKVGCNPATR--VLRATLHMGSVVAISANI*GGT*SAEGRIGLCIAHGGGRHCNHEGW 774
RCQ GC + + H G + G T AEG C HGGG+ C +G
Sbjct: 394 RCQTPGCTKGAQGSTMYCKAHGGGKRCTAP---GCTKGAEGSTPFCKGHGGGKRCGFQGG 450
Query: 775 ---TRAARGNSSLRIRHGAER--GAKECTM-------FCKAHGEGKRCKAVGCTKGAEGS 918
T++ G ++ + HG + ECT +C HG GKRCK GC K A+GS
Sbjct: 451 GICTKSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCGKSAQGS 510
Query: 919 T 921
T
Sbjct: 511 T 511
Score = 21.6 bits (44), Expect(2) = 9e-09
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 545 KGARGSSGLCI 577
+ ARG SGLCI
Sbjct: 352 RAARGKSGLCI 362
Score = 58.2 bits (139), Expect = 3e-06
Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Frame = +1
Query: 700 T*SAEGRIGLCIAHGGGRHCNHEGWTRAARGNSSLRIRHGAERGAKEC------------ 843
T S G C+AHGGG+ C T++ARG + +RHG G K C
Sbjct: 454 TKSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDYCVRHG---GGKRCKFEGCGKSAQGS 510
Query: 844 TMFCKAHGEGKRC 882
T FCKAHG GKRC
Sbjct: 511 TDFCKAHGGGKRC 523
>gb|ABK96565.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 681
Score = 102 bits (254), Expect(2) = 2e-23
Identities = 63/143 (44%), Positives = 69/143 (48%), Gaps = 36/143 (25%)
Frame = +1
Query: 601 RCQKVGCNPAT--RVLRATLHMGSVVAISANI*GGT*SAEGRIGLCIAHGGGRHCNHEGW 774
RC+K GC R + H G G T SAEGR CIAHGGGR C+HEG
Sbjct: 290 RCRKAGCLKGAEGRTVYCKAHGGGR---RCEFLGCTKSAEGRTDFCIAHGGGRRCSHEGC 346
Query: 775 TRAARGNSSLRIRH----------------------------------GAERGAKECTMF 852
TRAARG S L IRH G +GA+ TMF
Sbjct: 347 TRAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQFLGCTKGAQGSTMF 406
Query: 853 CKAHGEGKRCKAVGCTKGAEGST 921
CKAHG GKRC A GC+KGAEGST
Sbjct: 407 CKAHGGGKRCTAPGCSKGAEGST 429
Score = 33.5 bits (75), Expect(2) = 2e-23
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Frame = +2
Query: 380 AIFANQVPGKVCPDSINLEISTSMVDMSRSSINCASGSF*LP*LSKR*NLYLMD------ 541
+ F NQ+P P + S+S++ +SS+ C SG +S++ Y
Sbjct: 213 SFFFNQIPRTRDPTPSFPDHSSSVITTPKSSVTCTSG------ISQQQQPYQRGTSLKLC 266
Query: 542 -----GKGARGSSGLCIA 580
GKGARG+SG CI+
Sbjct: 267 QVEGCGKGARGASGRCIS 284
Score = 63.9 bits (154), Expect(2) = 2e-08
Identities = 41/121 (33%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Frame = +1
Query: 601 RCQKVGCNPATR--VLRATLHMGSVVAISANI*GGT*SAEGRIGLCIAHGGGRHCNHEGW 774
RCQ +GC + + H G + G + AEG C HGGG+ C +G
Sbjct: 390 RCQFLGCTKGAQGSTMFCKAHGGGKRCTAP---GCSKGAEGSTPFCKGHGGGKRCAFQGG 446
Query: 775 ---TRAARGNSSLRIRHGAER--GAKECTM-------FCKAHGEGKRCKAVGCTKGAEGS 918
T++ G ++ + HG + ECT FC HG GKRCK GC K A+GS
Sbjct: 447 GVCTKSVHGGTNFCVAHGGGKRCAVPECTKSARGRTHFCVRHGGGKRCKFEGCGKSAQGS 506
Query: 919 T 921
T
Sbjct: 507 T 507
Score = 21.6 bits (44), Expect(2) = 2e-08
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 545 KGARGSSGLCI 577
+ ARG SGLCI
Sbjct: 348 RAARGKSGLCI 358