BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010662
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   194   8e-48
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   189   3e-46
ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   187   8e-46
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...   185   4e-45

>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  194 bits (492), Expect = 8e-48
 Identities = 90/129 (69%), Positives = 108/129 (83%)
 Frame = -1

Query: 392 KAMTERDVVSWNSMVAGLIKCGELQEGIRLFEQMPKRDIVSWNTVLGGYVKAGELSRGFD 213
           + M ERD VSWNSM+ GL+K GEL E  RLF++MP+RD VSWNT+L GYVKAGE++  F+
Sbjct: 176 EVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFE 235

Query: 212 LFEKMPERNAVSWSTMVSGYRKVGDMNMARMLFDKAPIKNLVLWTIMISGYAEQGLAKEA 33
           LFEKMP RN VSWSTMV GY K GDM+MAR+LFDK P+KNLV WTIMISGYAE+GLAK+A
Sbjct: 236 LFEKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDA 295

Query: 32  FLLYDEMEK 6
             LY++ME+
Sbjct: 296 INLYNQMEE 304


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  189 bits (479), Expect = 3e-46
 Identities = 88/126 (69%), Positives = 106/126 (84%)
 Frame = -1

Query: 386 MTERDVVSWNSMVAGLIKCGELQEGIRLFEQMPKRDIVSWNTVLGGYVKAGELSRGFDLF 207
           M E+D+VSWNSM+ GL+K G+L    +LF++M +RD VSWNT+L GYVKAGE+S+ F+LF
Sbjct: 184 MGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLF 243

Query: 206 EKMPERNAVSWSTMVSGYRKVGDMNMARMLFDKAPIKNLVLWTIMISGYAEQGLAKEAFL 27
           EKMPERN VSWSTMVSGY K GDM MARMLFDK P KNLV WTI+ISG+AE+GLAKEA  
Sbjct: 244 EKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATT 303

Query: 26  LYDEME 9
           LY++ME
Sbjct: 304 LYNQME 309


>ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|222848341|gb|EEE85888.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  189 bits (479), Expect = 3e-46
 Identities = 86/129 (66%), Positives = 106/129 (82%)
 Frame = -1

Query: 392 KAMTERDVVSWNSMVAGLIKCGELQEGIRLFEQMPKRDIVSWNTVLGGYVKAGELSRGFD 213
           K M ERDVVSWNSM+ GL+K GEL E  +LF++MP +D VSWNT+L GYVKAGE+++ F 
Sbjct: 5   KVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKAFG 64

Query: 212 LFEKMPERNAVSWSTMVSGYRKVGDMNMARMLFDKAPIKNLVLWTIMISGYAEQGLAKEA 33
           LFE MPERN VSWSTMVSGY K GDM MARMLFD+ P+KNLV WTI++SGYA +GLAK+A
Sbjct: 65  LFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDA 124

Query: 32  FLLYDEMEK 6
              +++ME+
Sbjct: 125 IRSFEQMEE 133


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  187 bits (475), Expect = 8e-46
 Identities = 85/128 (66%), Positives = 107/128 (83%)
 Frame = -1

Query: 389 AMTERDVVSWNSMVAGLIKCGELQEGIRLFEQMPKRDIVSWNTVLGGYVKAGELSRGFDL 210
           AM ERDVV+WNSM+ GL++CGELQ   +LF++MP RD+VSWNT+L GY KAGE+   F+L
Sbjct: 182 AMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFEL 241

Query: 209 FEKMPERNAVSWSTMVSGYRKVGDMNMARMLFDKAPIKNLVLWTIMISGYAEQGLAKEAF 30
           FE+MP RN VSWSTMV GY K GDM+MARMLFD+ P+KN+VLWT +I+GYAE+GLA+EA 
Sbjct: 242 FERMPWRNIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREAT 301

Query: 29  LLYDEMEK 6
            LY +ME+
Sbjct: 302 ELYGKMEE 309


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  185 bits (469), Expect = 4e-45
 Identities = 82/128 (64%), Positives = 107/128 (83%)
 Frame = -1

Query: 389 AMTERDVVSWNSMVAGLIKCGELQEGIRLFEQMPKRDIVSWNTVLGGYVKAGELSRGFDL 210
           AM ERDVV+WNSM+ GL++CGEL+   +LF++MP+RD+VSWNT+L GY KAGE+ R F+L
Sbjct: 182 AMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFEL 241

Query: 209 FEKMPERNAVSWSTMVSGYRKVGDMNMARMLFDKAPIKNLVLWTIMISGYAEQGLAKEAF 30
           FE+MP+RN VSWSTMV GY K GDM+MAR+LFD+ P KN+VLWT +I+GYAE+G  +EA 
Sbjct: 242 FERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREAT 301

Query: 29  LLYDEMEK 6
            LY +ME+
Sbjct: 302 ELYGKMEE 309



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
 Frame = -1

Query: 281 DIVSWNTVLGGYVKAGE--LSRGFDLFEKMPERNAVSWSTMVSGYRKVGDMNMARMLFDK 108
           DI   N+++  Y + G   L     LF  M ER+ V+W++M+ G  + G++  A  LFD+
Sbjct: 154 DIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDE 213

Query: 107 APIKNLVLWTIMISGYAEQGLAKEAFLLYDEM 12
            P +++V W  M+ GYA+ G    AF L++ M
Sbjct: 214 MPERDMVSWNTMLDGYAKAGEMDRAFELFERM 245