BLASTX nr result

ID: Coptis23_contig00010661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010661
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109
gb|ABK93021.1| unknown [Populus trichocarpa]                          400   e-109
ref|XP_002276213.1| PREDICTED: microtubule-associated protein RP...   391   e-106
ref|XP_002330097.1| predicted protein [Populus trichocarpa] gi|2...   385   e-104
ref|XP_003523028.1| PREDICTED: microtubule-associated protein RP...   379   e-102

>ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|222859277|gb|EEE96824.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  401 bits (1031), Expect = e-109
 Identities = 202/260 (77%), Positives = 223/260 (85%), Gaps = 3/260 (1%)
 Frame = -1

Query: 1101 MATNIGMMDGAYFVGRNEILTWINATLQLNLSRIEEAASGAVQCQMMDMTHPGVVPMHKV 922
            MA+NIGMMD AYFVGRNEILTWIN  LQLNLSRIEEAASGAVQCQMMDMT+PGVVPMHKV
Sbjct: 1    MASNIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 921  NFDAKSEYDMIQNYKVLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSINGG 742
            NFDAK+EYDMIQNYKVLQ+VF KLK+EKHIEVNRLVKGRPLDNLEFLQWLKRYCDS+NGG
Sbjct: 61   NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 741  ITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSSNGTKQGKV---GGSMSDG 571
            I NENYNPVERR KGGK+RNSKGSQK TKSL  NN  N  SS+     K+   G +++ G
Sbjct: 121  IMNENYNPVERRSKGGKDRNSKGSQKTTKSLQANNLHNSASSDTVDLNKMSGKGSAVAGG 180

Query: 570  AYSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLPVAAAFKKIL 391
            A  +  IQAL+ ++ +LKLSVDHLEKERDFYFAKLRDIEILCQ PE+E+LP+  A KKIL
Sbjct: 181  ATYSEEIQALSKEVTNLKLSVDHLEKERDFYFAKLRDIEILCQIPEMEDLPMTVAIKKIL 240

Query: 390  YAADAKESALPEAQELLTIA 331
            YA DAKESAL EAQE L+ A
Sbjct: 241  YADDAKESALEEAQEYLSEA 260


>gb|ABK93021.1| unknown [Populus trichocarpa]
          Length = 276

 Score =  400 bits (1028), Expect = e-109
 Identities = 203/265 (76%), Positives = 225/265 (84%), Gaps = 8/265 (3%)
 Frame = -1

Query: 1101 MATNIGMMDGAYFVGRNEILTWINATLQLNLSRIEEAASGAVQCQMMDMTHPGVVPMHKV 922
            MA+NIGMMD AYFVGRNEILTWIN  LQLNLSRIEEAASGAVQCQMMDMT+PGVVPMHKV
Sbjct: 1    MASNIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 921  NFDAKSEYDMIQNYKVLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSINGG 742
            NFDAK+EYDMIQNY+VLQ+VF KLK+EKHIEVNRLVKGRPLDNLEFLQWLKRYCDS+NGG
Sbjct: 61   NFDAKTEYDMIQNYEVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 741  ITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSS--------NGTKQGKVGG 586
            I NENYNPVERR KGGK+RNSKGSQK TKSL  NN  N  S         +G KQG+ G 
Sbjct: 121  IMNENYNPVERRSKGGKDRNSKGSQKTTKSLQANNLHNSASGDTVDLNKMSGPKQGR-GS 179

Query: 585  SMSDGAYSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLPVAAA 406
            +++ GA  +  IQAL+ ++ +LKLSVDHLEKERDFYFAKLRDIEILCQ PE+E+LP+  A
Sbjct: 180  AVAGGATYSEEIQALSKEVTNLKLSVDHLEKERDFYFAKLRDIEILCQIPEMEDLPMTVA 239

Query: 405  FKKILYAADAKESALPEAQELLTIA 331
             KKILYA DAKESAL EAQE L+ A
Sbjct: 240  IKKILYADDAKESALEEAQEYLSEA 264


>ref|XP_002276213.1| PREDICTED: microtubule-associated protein RP/EB family member 3
            [Vitis vinifera] gi|296086393|emb|CBI31982.3| unnamed
            protein product [Vitis vinifera]
          Length = 280

 Score =  391 bits (1005), Expect = e-106
 Identities = 198/266 (74%), Positives = 220/266 (82%), Gaps = 7/266 (2%)
 Frame = -1

Query: 1101 MATNIGMMDGAYFVGRNEILTWINATLQLNLSRIEEAASGAVQCQMMDMTHPGVVPMHKV 922
            MA +IGMMD AYFVGR EIL+WINATL LNLS++EEAASGAVQCQMMDM HPGVVPMHKV
Sbjct: 1    MAASIGMMDAAYFVGRGEILSWINATLHLNLSKVEEAASGAVQCQMMDMIHPGVVPMHKV 60

Query: 921  NFDAKSEYDMIQNYKVLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSINGG 742
            NFDAK+EYDMIQNYK+LQEVF KLK+EKHIEVN+LVKGRPLDNLEFLQWLKRYCDS+NGG
Sbjct: 61   NFDAKTEYDMIQNYKILQEVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSMNGG 120

Query: 741  ITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSSNGT-------KQGKVGGS 583
            I NENYNPVERRCKGGKERN KGS K +KSL  NN +N  S NG         +G+    
Sbjct: 121  IMNENYNPVERRCKGGKERNIKGSYKSSKSLQANNLSNV-SDNGICIDESSGPKGRHKSE 179

Query: 582  MSDGAYSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLPVAAAF 403
            MS GA S   IQ L  +IADLKLSVD LEKERDFYF KLRDIEILCQ+PE+E+LP++ A 
Sbjct: 180  MSGGANSVGEIQGLCQEIADLKLSVDDLEKERDFYFGKLRDIEILCQTPEVEDLPMSMAI 239

Query: 402  KKILYAADAKESALPEAQELLTIAKD 325
            KKILYA DAK SAL EAQE++T + D
Sbjct: 240  KKILYAVDAKVSALGEAQEIITKSGD 265


>ref|XP_002330097.1| predicted protein [Populus trichocarpa] gi|222871231|gb|EEF08362.1|
            predicted protein [Populus trichocarpa]
          Length = 274

 Score =  385 bits (989), Expect = e-104
 Identities = 196/262 (74%), Positives = 220/262 (83%), Gaps = 5/262 (1%)
 Frame = -1

Query: 1101 MATNIGMMDGAYFVGRNEILTWINATLQLNLSRIEEAASGAVQCQMMDMTHPGVVPMHKV 922
            MA+NIGMMD AYFVGRNEILTWIN  LQLNLSRIEEAASGAVQCQMMDMT+PGVVPMHKV
Sbjct: 1    MASNIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 921  NFDAKSEYDMIQNYKVLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSINGG 742
            NFDAK+EYDMIQNYK+LQ++F KLK+EKH+EVNRLVKGRPLDNLEFLQWLKRYCDS+NGG
Sbjct: 61   NFDAKTEYDMIQNYKILQDIFNKLKIEKHLEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 741  ITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSSNGTKQGKV---GGSMSDG 571
            I NENYNP+ERR KGG++RNS+GSQK TKS   +N  N  S       K+   G ++   
Sbjct: 121  IMNENYNPLERRSKGGRDRNSRGSQKTTKSQQASNMHNSSSGYTVDLNKMSGRGSAVVGE 180

Query: 570  AYSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLP--VAAAFKK 397
            A S+  IQAL+ +IAD+KLSVD LEKERDFYFAKLRDIEILCQ+PELE+LP  V  A KK
Sbjct: 181  ANSSEEIQALSKEIADMKLSVDLLEKERDFYFAKLRDIEILCQTPELEDLPVRVVVAIKK 240

Query: 396  ILYAADAKESALPEAQELLTIA 331
            ILYAAD KESAL EAQE L+ A
Sbjct: 241  ILYAADTKESALEEAQEYLSEA 262


>ref|XP_003523028.1| PREDICTED: microtubule-associated protein RP/EB family member 1-like
            isoform 1 [Glycine max]
          Length = 271

 Score =  379 bits (972), Expect = e-102
 Identities = 195/254 (76%), Positives = 218/254 (85%)
 Frame = -1

Query: 1101 MATNIGMMDGAYFVGRNEILTWINATLQLNLSRIEEAASGAVQCQMMDMTHPGVVPMHKV 922
            MAT+IG+MD AYFVGRNEIL+WIN  LQLNLSRIEEAASGAVQCQMMDMT+PGVVPMHKV
Sbjct: 1    MATSIGIMDSAYFVGRNEILSWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 921  NFDAKSEYDMIQNYKVLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSINGG 742
            NFDAK+EYDMIQNYKVLQ+VF KLK+EKHIEV RLVKGRPLDNLEFLQWLKRYCDS+NGG
Sbjct: 61   NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVGRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 741  ITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSSNGTKQGKVGGSMSDGAYS 562
            I NENYNPVERR KGGK+RN KG  K +KSL  N      + +G+KQ +  G  +DG  S
Sbjct: 121  IMNENYNPVERRVKGGKDRNVKG-LKSSKSLQTNTM----NHSGSKQLRSSGG-ADGVNS 174

Query: 561  TSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLPVAAAFKKILYAA 382
            ++ IQAL+ Q++DLKLSVDHLEKERDFYFAKLRDIEILCQ+ ELEN P++ A KKILYAA
Sbjct: 175  SAEIQALSKQVSDLKLSVDHLEKERDFYFAKLRDIEILCQASELENDPMSLAIKKILYAA 234

Query: 381  DAKESALPEAQELL 340
            DAK SAL EAQE L
Sbjct: 235  DAKGSALDEAQEYL 248


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