BLASTX nr result

ID: Coptis23_contig00010655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010655
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270072.1| PREDICTED: uncharacterized protein LOC100254...    79   2e-41
ref|XP_003632563.1| PREDICTED: uncharacterized protein LOC100254...    79   2e-41
ref|XP_003632562.1| PREDICTED: uncharacterized protein LOC100254...    79   2e-41
emb|CBI39128.3| unnamed protein product [Vitis vinifera]               79   2e-41
ref|XP_002322772.1| predicted protein [Populus trichocarpa] gi|2...    75   3e-38

>ref|XP_002270072.1| PREDICTED: uncharacterized protein LOC100254761 isoform 1 [Vitis
           vinifera]
          Length = 751

 Score = 79.0 bits (193), Expect(3) = 2e-41
 Identities = 38/62 (61%), Positives = 45/62 (72%)
 Frame = -2

Query: 485 KRDFTKEEEVNDDCGFVEWNEEFQSFVTLSAYKENAFHPWEISLSVLNVLSQGQKIKTPI 306
           KR+FTKEE+V  D G V W+EEFQS   LSAYK+N FHPWEI+ +VLN   QG K K P+
Sbjct: 65  KRNFTKEEDVGQD-GVVLWDEEFQSVCNLSAYKDNVFHPWEIAFTVLNGSHQGPKNKVPV 123

Query: 305 FG 300
            G
Sbjct: 124 VG 125



 Score = 72.8 bits (177), Expect(3) = 2e-41
 Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = -1

Query: 192 AGKDEFEVCVPLTLTSGDAEPHPSICLFFRLLELRTTQENSETVQRAVSPIPLSPR-SEA 16
           A + EFE+ +PLTL  G AEPHP +C+   LLELRT QE +++VQRA+ P+P SPR  E 
Sbjct: 138 AEEKEFELNIPLTLPGGAAEPHPLLCISLSLLELRTAQEPTDSVQRAIVPVPSSPRPGET 197

Query: 15  LSSEK 1
            S+EK
Sbjct: 198 ASTEK 202



 Score = 64.7 bits (156), Expect(3) = 2e-41
 Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
 Frame = -3

Query: 730 VKMMRWRPWPPIMTKKYEVKLVVKRXXXXXXXXXXXGS--RLKVEVRWKGGKNGFSSLR 560
           VKMMRWRPWPP++ +KYEVKLVV+R               R+ VE+RWKG K   SSLR
Sbjct: 3   VKMMRWRPWPPLIPRKYEVKLVVRRMEGWGCAGEEGAEGRRVVVEIRWKGPKISLSSLR 61


>ref|XP_003632563.1| PREDICTED: uncharacterized protein LOC100254761 isoform 3 [Vitis
           vinifera]
          Length = 750

 Score = 79.0 bits (193), Expect(3) = 2e-41
 Identities = 38/62 (61%), Positives = 45/62 (72%)
 Frame = -2

Query: 485 KRDFTKEEEVNDDCGFVEWNEEFQSFVTLSAYKENAFHPWEISLSVLNVLSQGQKIKTPI 306
           KR+FTKEE+V  D G V W+EEFQS   LSAYK+N FHPWEI+ +VLN   QG K K P+
Sbjct: 65  KRNFTKEEDVGQD-GVVLWDEEFQSVCNLSAYKDNVFHPWEIAFTVLNGSHQGPKNKVPV 123

Query: 305 FG 300
            G
Sbjct: 124 VG 125



 Score = 72.8 bits (177), Expect(3) = 2e-41
 Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = -1

Query: 192 AGKDEFEVCVPLTLTSGDAEPHPSICLFFRLLELRTTQENSETVQRAVSPIPLSPR-SEA 16
           A + EFE+ +PLTL  G AEPHP +C+   LLELRT QE +++VQRA+ P+P SPR  E 
Sbjct: 138 AEEKEFELNIPLTLPGGAAEPHPLLCISLSLLELRTAQEPTDSVQRAIVPVPSSPRPGET 197

Query: 15  LSSEK 1
            S+EK
Sbjct: 198 ASTEK 202



 Score = 64.7 bits (156), Expect(3) = 2e-41
 Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
 Frame = -3

Query: 730 VKMMRWRPWPPIMTKKYEVKLVVKRXXXXXXXXXXXGS--RLKVEVRWKGGKNGFSSLR 560
           VKMMRWRPWPP++ +KYEVKLVV+R               R+ VE+RWKG K   SSLR
Sbjct: 3   VKMMRWRPWPPLIPRKYEVKLVVRRMEGWGCAGEEGAEGRRVVVEIRWKGPKISLSSLR 61


>ref|XP_003632562.1| PREDICTED: uncharacterized protein LOC100254761 isoform 2 [Vitis
           vinifera]
          Length = 727

 Score = 79.0 bits (193), Expect(3) = 2e-41
 Identities = 38/62 (61%), Positives = 45/62 (72%)
 Frame = -2

Query: 485 KRDFTKEEEVNDDCGFVEWNEEFQSFVTLSAYKENAFHPWEISLSVLNVLSQGQKIKTPI 306
           KR+FTKEE+V  D G V W+EEFQS   LSAYK+N FHPWEI+ +VLN   QG K K P+
Sbjct: 65  KRNFTKEEDVGQD-GVVLWDEEFQSVCNLSAYKDNVFHPWEIAFTVLNGSHQGPKNKVPV 123

Query: 305 FG 300
            G
Sbjct: 124 VG 125



 Score = 72.8 bits (177), Expect(3) = 2e-41
 Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = -1

Query: 192 AGKDEFEVCVPLTLTSGDAEPHPSICLFFRLLELRTTQENSETVQRAVSPIPLSPR-SEA 16
           A + EFE+ +PLTL  G AEPHP +C+   LLELRT QE +++VQRA+ P+P SPR  E 
Sbjct: 138 AEEKEFELNIPLTLPGGAAEPHPLLCISLSLLELRTAQEPTDSVQRAIVPVPSSPRPGET 197

Query: 15  LSSEK 1
            S+EK
Sbjct: 198 ASTEK 202



 Score = 64.7 bits (156), Expect(3) = 2e-41
 Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
 Frame = -3

Query: 730 VKMMRWRPWPPIMTKKYEVKLVVKRXXXXXXXXXXXGS--RLKVEVRWKGGKNGFSSLR 560
           VKMMRWRPWPP++ +KYEVKLVV+R               R+ VE+RWKG K   SSLR
Sbjct: 3   VKMMRWRPWPPLIPRKYEVKLVVRRMEGWGCAGEEGAEGRRVVVEIRWKGPKISLSSLR 61


>emb|CBI39128.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score = 79.0 bits (193), Expect(3) = 2e-41
 Identities = 38/62 (61%), Positives = 45/62 (72%)
 Frame = -2

Query: 485 KRDFTKEEEVNDDCGFVEWNEEFQSFVTLSAYKENAFHPWEISLSVLNVLSQGQKIKTPI 306
           KR+FTKEE+V  D G V W+EEFQS   LSAYK+N FHPWEI+ +VLN   QG K K P+
Sbjct: 65  KRNFTKEEDVGQD-GVVLWDEEFQSVCNLSAYKDNVFHPWEIAFTVLNGSHQGPKNKVPV 123

Query: 305 FG 300
            G
Sbjct: 124 VG 125



 Score = 72.8 bits (177), Expect(3) = 2e-41
 Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = -1

Query: 192 AGKDEFEVCVPLTLTSGDAEPHPSICLFFRLLELRTTQENSETVQRAVSPIPLSPR-SEA 16
           A + EFE+ +PLTL  G AEPHP +C+   LLELRT QE +++VQRA+ P+P SPR  E 
Sbjct: 138 AEEKEFELNIPLTLPGGAAEPHPLLCISLSLLELRTAQEPTDSVQRAIVPVPSSPRPGET 197

Query: 15  LSSEK 1
            S+EK
Sbjct: 198 ASTEK 202



 Score = 64.7 bits (156), Expect(3) = 2e-41
 Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
 Frame = -3

Query: 730 VKMMRWRPWPPIMTKKYEVKLVVKRXXXXXXXXXXXGS--RLKVEVRWKGGKNGFSSLR 560
           VKMMRWRPWPP++ +KYEVKLVV+R               R+ VE+RWKG K   SSLR
Sbjct: 3   VKMMRWRPWPPLIPRKYEVKLVVRRMEGWGCAGEEGAEGRRVVVEIRWKGPKISLSSLR 61


>ref|XP_002322772.1| predicted protein [Populus trichocarpa] gi|222867402|gb|EEF04533.1|
           predicted protein [Populus trichocarpa]
          Length = 794

 Score = 74.7 bits (182), Expect(3) = 3e-38
 Identities = 39/69 (56%), Positives = 45/69 (65%), Gaps = 7/69 (10%)
 Frame = -2

Query: 485 KRDFTKEEEVNDDCG-------FVEWNEEFQSFVTLSAYKENAFHPWEISLSVLNVLSQG 327
           KRDFTKE EV    G        VEW+EEF+S  TLSA+KEN FHPWEIS +V N ++QG
Sbjct: 79  KRDFTKEVEVYGGGGEGENGGVLVEWDEEFESLCTLSAHKENVFHPWEISFTVFNGVNQG 138

Query: 326 QKIKTPIFG 300
            K K P  G
Sbjct: 139 PKNKVPGVG 147



 Score = 69.7 bits (169), Expect(3) = 3e-38
 Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
 Frame = -1

Query: 192 AGKDEFEVCVPLTLTSGDAEPHPSICLFFRLLELRTTQENSETVQRAVSPIPLSPRS-EA 16
           A + EFE+ +PL +++G AEP P +C+   LLELRT  E SE+VQRA+ PIP SP+S EA
Sbjct: 160 AEQKEFELRLPLMVSAGVAEPRPLLCVSLSLLELRTAHETSESVQRAIVPIPSSPQSGEA 219

Query: 15  LSSEK 1
           +S+EK
Sbjct: 220 VSTEK 224



 Score = 61.2 bits (147), Expect(3) = 3e-38
 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 15/72 (20%)
 Frame = -3

Query: 730 VKMMRWRPWPPIMTKKYEVKLVVKRXXXXXXXXXXXGS---------------RLKVEVR 596
           VKMMRWRPWPP+++KKYEV+LVV+R            +               +L VE+R
Sbjct: 3   VKMMRWRPWPPLISKKYEVRLVVRRIEGWDRVREALAAAPGTSSGGDLKDKSEKLTVEIR 62

Query: 595 WKGGKNGFSSLR 560
           WKG K   SSLR
Sbjct: 63  WKGPKLALSSLR 74


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