BLASTX nr result

ID: Coptis23_contig00010648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010648
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37029.3| unnamed protein product [Vitis vinifera]               61   2e-07
ref|XP_002280535.1| PREDICTED: uncharacterized protein LOC100250...    61   2e-07
ref|XP_004156081.1| PREDICTED: uncharacterized LOC101215146 [Cuc...    60   4e-07
ref|XP_004149481.1| PREDICTED: uncharacterized protein LOC101215...    60   4e-07
ref|XP_002519363.1| Protein C9orf78, putative [Ricinus communis]...    57   2e-06

>emb|CBI37029.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/45 (66%), Positives = 34/45 (75%)
 Frame = -2

Query: 613 LRREHPELYKDKNASENGAAARPAEASNNDAAGRRQAATDELMLD 479
           LRREHPELYKDK   +NG  +R  +AS  + AGRRQAATDE MLD
Sbjct: 242 LRREHPELYKDKGVQDNGGGSRLPDAS-TEVAGRRQAATDEFMLD 285


>ref|XP_002280535.1| PREDICTED: uncharacterized protein LOC100250416 [Vitis vinifera]
          Length = 270

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/45 (66%), Positives = 34/45 (75%)
 Frame = -2

Query: 613 LRREHPELYKDKNASENGAAARPAEASNNDAAGRRQAATDELMLD 479
           LRREHPELYKDK   +NG  +R  +AS  + AGRRQAATDE MLD
Sbjct: 214 LRREHPELYKDKGVQDNGGGSRLPDAS-TEVAGRRQAATDEFMLD 257


>ref|XP_004156081.1| PREDICTED: uncharacterized LOC101215146 [Cucumis sativus]
          Length = 305

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/45 (60%), Positives = 38/45 (84%)
 Frame = -2

Query: 613 LRREHPELYKDKNASENGAAARPAEASNNDAAGRRQAATDELMLD 479
           LRREHPELYKD++  ++G+ ++PAE +  +AAG+RQAATDE ML+
Sbjct: 249 LRREHPELYKDRSLQDDGSGSKPAE-TGTEAAGQRQAATDEFMLE 292


>ref|XP_004149481.1| PREDICTED: uncharacterized protein LOC101215146 [Cucumis sativus]
          Length = 293

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/45 (60%), Positives = 38/45 (84%)
 Frame = -2

Query: 613 LRREHPELYKDKNASENGAAARPAEASNNDAAGRRQAATDELMLD 479
           LRREHPELYKD++  ++G+ ++PAE +  +AAG+RQAATDE ML+
Sbjct: 237 LRREHPELYKDRSLQDDGSGSKPAE-TGTEAAGQRQAATDEFMLE 280


>ref|XP_002519363.1| Protein C9orf78, putative [Ricinus communis]
           gi|223541430|gb|EEF42980.1| Protein C9orf78, putative
           [Ricinus communis]
          Length = 293

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/45 (60%), Positives = 35/45 (77%)
 Frame = -2

Query: 613 LRREHPELYKDKNASENGAAARPAEASNNDAAGRRQAATDELMLD 479
           LRREHPELYKD+N+ +  A ++PA+  NN  A RR+AATDE ML+
Sbjct: 238 LRREHPELYKDRNSQDESAGSKPAD--NNTDATRREAATDEFMLE 280


Top