BLASTX nr result

ID: Coptis23_contig00010647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010647
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521418.1| nucleic acid binding protein, putative [Rici...    80   1e-13
gb|AFA45120.1| glycine-rich protein [Medicago sativa]                  78   6e-13
ref|XP_003637773.1| hypothetical protein MTR_102s0003 [Medicago ...    78   6e-13
ref|XP_003593472.1| hypothetical protein MTR_2g012520 [Medicago ...    78   6e-13
ref|XP_002317234.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>ref|XP_002521418.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223539317|gb|EEF40908.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 147

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +1

Query: 37  PSGGRSKNGIVRPTVVCNERGPCYKKKLICPAKCFTSYSRS 159
           P+GG SK GI+RPTVVC E+GPCYKKKL CPAKCFTSYSRS
Sbjct: 82  PNGGYSKGGIIRPTVVCKEKGPCYKKKLTCPAKCFTSYSRS 122


>gb|AFA45120.1| glycine-rich protein [Medicago sativa]
          Length = 163

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = +1

Query: 37  PSGGRSKNGIVRPTVVCNERGPCYKKKLICPAKCFTSYSRS 159
           P+GG SKNGIVRPTVVC ++GPCY+KKL CPAKCF+S+SRS
Sbjct: 98  PNGGHSKNGIVRPTVVCKDKGPCYQKKLTCPAKCFSSFSRS 138


>ref|XP_003637773.1| hypothetical protein MTR_102s0003 [Medicago truncatula]
           gi|355503708|gb|AES84911.1| hypothetical protein
           MTR_102s0003 [Medicago truncatula]
          Length = 146

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = +1

Query: 37  PSGGRSKNGIVRPTVVCNERGPCYKKKLICPAKCFTSYSRS 159
           P+GG SKNGIVRPTVVC ++GPCY+KKL CPAKCF+S+SRS
Sbjct: 81  PNGGHSKNGIVRPTVVCKDKGPCYQKKLTCPAKCFSSFSRS 121


>ref|XP_003593472.1| hypothetical protein MTR_2g012520 [Medicago truncatula]
           gi|338809153|gb|AEJ08194.1| glycine-rich protein
           [Medicago truncatula] gi|355482520|gb|AES63723.1|
           hypothetical protein MTR_2g012520 [Medicago truncatula]
           gi|388496786|gb|AFK36459.1| unknown [Medicago
           truncatula]
          Length = 159

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = +1

Query: 37  PSGGRSKNGIVRPTVVCNERGPCYKKKLICPAKCFTSYSRS 159
           P+GG SKNGIVRPTVVC ++GPCY+KKL CPAKCF+S+SRS
Sbjct: 94  PNGGHSKNGIVRPTVVCKDKGPCYQKKLTCPAKCFSSFSRS 134


>ref|XP_002317234.1| predicted protein [Populus trichocarpa] gi|222860299|gb|EEE97846.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = +1

Query: 37  PSGGRSKNGIVRPTVVCNERGPCYKKKLICPAKCFTSYSRS 159
           P GG SK G+++P+VVC E+GPCYKKKL CPAKCFTSYSRS
Sbjct: 77  PKGGSSKGGVIKPSVVCKEKGPCYKKKLTCPAKCFTSYSRS 117


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