BLASTX nr result

ID: Coptis23_contig00010646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010646
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138201.1| PREDICTED: uncharacterized protein LOC101209...   352   1e-94
ref|XP_002512008.1| conserved hypothetical protein [Ricinus comm...   348   2e-93
ref|XP_002318556.1| predicted protein [Populus trichocarpa] gi|2...   345   1e-92
ref|NP_197695.1| uncharacterized protein [Arabidopsis thaliana] ...   343   5e-92
ref|XP_002270846.1| PREDICTED: uncharacterized protein LOC100262...   341   1e-91

>ref|XP_004138201.1| PREDICTED: uncharacterized protein LOC101209271 [Cucumis sativus]
           gi|449525099|ref|XP_004169557.1| PREDICTED:
           uncharacterized protein LOC101226625 [Cucumis sativus]
          Length = 251

 Score =  352 bits (902), Expect = 1e-94
 Identities = 178/261 (68%), Positives = 210/261 (80%), Gaps = 3/261 (1%)
 Frame = +1

Query: 64  MATTTPSTLFLTNPFFAPLGKQLDLKNRI-KFNNVDFRRT--APLRCAMDIASPSPFERN 234
           MA+ + + L L  PF A      +L  R+ + N   FR    +P RC +D    +P+E N
Sbjct: 1   MASVSITKLDLATPFLAQ-----NLPGRLNRLNGKPFRALFRSP-RCVLD----TPYEGN 50

Query: 235 LPKFQRTKVWDPYKRLGISKDASEDEIWSSRNFLLQQYAGHERSEESIEGAFEKILMNSY 414
           + KF R +VWDPYKRLG+S DASE+EIW +RNFLLQQY+GHERSEESIE AFEKILM S+
Sbjct: 51  VTKFPRVRVWDPYKRLGVSSDASEEEIWGARNFLLQQYSGHERSEESIEAAFEKILMASF 110

Query: 415 KERKKTKFNLKTRLKKRVEESPSWVKTLLDFVELPPPVIIMRRLFLFAFMGGWSIMNSAD 594
           + RKKTK NLKTRLKK+VEESP W+K LL+FVELPP  +I RRLFLFAFMGGWSIMNSA+
Sbjct: 111 QHRKKTKINLKTRLKKQVEESPPWIKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAE 170

Query: 595 GGPAFQVAISLGACIYFLNDKTKSLARASILGFGALVVGWICGSFLVPMVPSVLLQPTWT 774
           GGPAFQVA+SL ACIYFLN+KTKS+ARASI+GFG+LVVGW+CGS +VP +PS LLQPTW+
Sbjct: 171 GGPAFQVAVSLAACIYFLNEKTKSVARASIIGFGSLVVGWVCGSLVVPSIPSFLLQPTWS 230

Query: 775 LELLTSLVAYVFLFLSCTFLK 837
           LELLTSLV Y FLFLSCTFLK
Sbjct: 231 LELLTSLVVYFFLFLSCTFLK 251


>ref|XP_002512008.1| conserved hypothetical protein [Ricinus communis]
           gi|223549188|gb|EEF50677.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  348 bits (892), Expect = 2e-93
 Identities = 171/250 (68%), Positives = 203/250 (81%), Gaps = 2/250 (0%)
 Frame = +1

Query: 94  LTNPFFA--PLGKQLDLKNRIKFNNVDFRRTAPLRCAMDIASPSPFERNLPKFQRTKVWD 267
           L++PF    P     + KNR+ +  +  R    ++CA+D    +P+E N+ KF R  VWD
Sbjct: 12  LSSPFLPSKPTKYGQNTKNRMLYGPIS-RNITRVKCAVD----APYEGNISKFPRVNVWD 66

Query: 268 PYKRLGISKDASEDEIWSSRNFLLQQYAGHERSEESIEGAFEKILMNSYKERKKTKFNLK 447
           PYKRLGIS  ASE+EIWSSRNFLL+QYAGHERSEESIE AFEK+L  S+KERKKTK NLK
Sbjct: 67  PYKRLGISPYASEEEIWSSRNFLLEQYAGHERSEESIEAAFEKLLTTSFKERKKTKINLK 126

Query: 448 TRLKKRVEESPSWVKTLLDFVELPPPVIIMRRLFLFAFMGGWSIMNSADGGPAFQVAISL 627
           TRLKK+VEESP WVK++L+FVELPP  +I RRLFLFAFMGGWSIMNSA+GGPAFQVA+SL
Sbjct: 127 TRLKKKVEESPPWVKSILNFVELPPVEVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSL 186

Query: 628 GACIYFLNDKTKSLARASILGFGALVVGWICGSFLVPMVPSVLLQPTWTLELLTSLVAYV 807
            ACIYFLN+KTKSL RA I+G GAL  GW+CGS  VPM+P+VL+ PTWTLELLTSLVAY+
Sbjct: 187 AACIYFLNEKTKSLGRAFIIGLGALAAGWVCGSVFVPMIPTVLIHPTWTLELLTSLVAYL 246

Query: 808 FLFLSCTFLK 837
           FLF++CTFLK
Sbjct: 247 FLFVACTFLK 256


>ref|XP_002318556.1| predicted protein [Populus trichocarpa] gi|222859229|gb|EEE96776.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  345 bits (884), Expect = 1e-92
 Identities = 163/219 (74%), Positives = 189/219 (86%)
 Frame = +1

Query: 181 APLRCAMDIASPSPFERNLPKFQRTKVWDPYKRLGISKDASEDEIWSSRNFLLQQYAGHE 360
           A ++CA+D    +P+E N+PKF R  VWDPYKRLGIS  ASE+EIWSSRNFL+QQYAGHE
Sbjct: 52  ASIKCAVD----APYEGNIPKFPRMNVWDPYKRLGISPYASEEEIWSSRNFLMQQYAGHE 107

Query: 361 RSEESIEGAFEKILMNSYKERKKTKFNLKTRLKKRVEESPSWVKTLLDFVELPPPVIIMR 540
            SEESIE AFEK+LM S++ERKKTK NLKTRLKK+VEESP WVK LLDFVELPP  +I R
Sbjct: 108 TSEESIEAAFEKLLMTSFRERKKTKINLKTRLKKKVEESPPWVKNLLDFVELPPVEVIFR 167

Query: 541 RLFLFAFMGGWSIMNSADGGPAFQVAISLGACIYFLNDKTKSLARASILGFGALVVGWIC 720
           RLFLFAFMGGWSIMNSA+GGPAFQVA+SL ACIYFLN+KTKSL RA I+G GAL  GW+C
Sbjct: 168 RLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACIYFLNEKTKSLGRAFIIGLGALAAGWVC 227

Query: 721 GSFLVPMVPSVLLQPTWTLELLTSLVAYVFLFLSCTFLK 837
           GS  VP++P+V++ PTWTLEL+TSLV+Y+FLFL CTFLK
Sbjct: 228 GSVCVPVIPTVIIPPTWTLELMTSLVSYLFLFLGCTFLK 266


>ref|NP_197695.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9759362|dbj|BAB09821.1| unnamed protein product
           [Arabidopsis thaliana] gi|21928168|gb|AAM78111.1|
           AT5g23040/MYJ24_3 [Arabidopsis thaliana]
           gi|23505829|gb|AAN28774.1| At5g23040/MYJ24_3
           [Arabidopsis thaliana] gi|62392260|dbj|BAD95465.1| cell
           growth defect factor [Arabidopsis thaliana]
           gi|332005729|gb|AED93112.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 258

 Score =  343 bits (879), Expect = 5e-92
 Identities = 168/252 (66%), Positives = 204/252 (80%), Gaps = 4/252 (1%)
 Frame = +1

Query: 94  LTNPFFAPLGKQLDLKNRIKFNNVDFRRTA----PLRCAMDIASPSPFERNLPKFQRTKV 261
           +++ F AP    L ++N  K + + FR  +     ++C +D    S +  N+P F RT+V
Sbjct: 12  VSSSFIAPSKPSL-VRNSSKTSLLPFRNVSRSFKTVKCTVD----SSYGGNVPTFPRTRV 66

Query: 262 WDPYKRLGISKDASEDEIWSSRNFLLQQYAGHERSEESIEGAFEKILMNSYKERKKTKFN 441
           WDPYKRLG+S  ASE+EIW+SRNFLLQQYAGHERSEESIEGAFEK+LM+S+  RKKTK N
Sbjct: 67  WDPYKRLGVSPYASEEEIWASRNFLLQQYAGHERSEESIEGAFEKLLMSSFIRRKKTKIN 126

Query: 442 LKTRLKKRVEESPSWVKTLLDFVELPPPVIIMRRLFLFAFMGGWSIMNSADGGPAFQVAI 621
           LK++LKK+VEESP W+K LLDFVE+PP   I RRLFLFAFMGGWSIMNSA+GGPAFQVA+
Sbjct: 127 LKSKLKKKVEESPPWLKALLDFVEMPPMDTIFRRLFLFAFMGGWSIMNSAEGGPAFQVAV 186

Query: 622 SLGACIYFLNDKTKSLARASILGFGALVVGWICGSFLVPMVPSVLLQPTWTLELLTSLVA 801
           SL AC+YFLN+KTKSL RA ++G GALV GW CGS ++PM+P+ L+QPTWTLELLTSLVA
Sbjct: 187 SLAACVYFLNEKTKSLGRACLIGIGALVAGWFCGSLIIPMIPTFLIQPTWTLELLTSLVA 246

Query: 802 YVFLFLSCTFLK 837
           YVFLFLSCTFLK
Sbjct: 247 YVFLFLSCTFLK 258


>ref|XP_002270846.1| PREDICTED: uncharacterized protein LOC100262799 [Vitis vinifera]
           gi|297734138|emb|CBI15385.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  341 bits (875), Expect = 1e-91
 Identities = 177/257 (68%), Positives = 206/257 (80%), Gaps = 6/257 (2%)
 Frame = +1

Query: 85  TLFLTNPFFAP--LGKQLDLKN---RIKFNNVDFRRTAPLRCAMDIASPSPFER-NLPKF 246
           +L LTNP F+   + ++L  +    ++K N +  R     RCA+D    +P+   NL KF
Sbjct: 3   SLLLTNPRFSSPHVARKLPARENSKKLKANGLVIRGP---RCAVD----TPYGGGNLTKF 55

Query: 247 QRTKVWDPYKRLGISKDASEDEIWSSRNFLLQQYAGHERSEESIEGAFEKILMNSYKERK 426
            R  VWDPYKRLGI  DASE+EIWSSRNFLLQQYAGHERSEESIE AFEKILM S+  R+
Sbjct: 56  PRITVWDPYKRLGIPPDASEEEIWSSRNFLLQQYAGHERSEESIEAAFEKILMASFINRR 115

Query: 427 KTKFNLKTRLKKRVEESPSWVKTLLDFVELPPPVIIMRRLFLFAFMGGWSIMNSADGGPA 606
           KTK NLK++LKK+VEESP WVK LL+FVELP   +I RRLFLFAFMGGWSI+NSA+GGPA
Sbjct: 116 KTKINLKSKLKKKVEESPPWVKNLLNFVELPATEVIFRRLFLFAFMGGWSIINSAEGGPA 175

Query: 607 FQVAISLGACIYFLNDKTKSLARASILGFGALVVGWICGSFLVPMVPSVLLQPTWTLELL 786
           FQVA+SL ACIYFLN+KTKSLARA I+G G+LV GW+CGSFLVPM+PS LL+PTWTLELL
Sbjct: 176 FQVAVSLAACIYFLNEKTKSLARAFIIGLGSLVAGWVCGSFLVPMIPSFLLRPTWTLELL 235

Query: 787 TSLVAYVFLFLSCTFLK 837
           TSLVAYVFLFL CTFLK
Sbjct: 236 TSLVAYVFLFLGCTFLK 252


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